Result of FASTA (omim) for pFN21AE0150
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0150, 315 aa
  1>>>pF1KE0150 315 - 315 aa - 315 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7097+/-0.000433; mu= 18.6202+/- 0.027
 mean_var=64.7862+/-13.946, 0's: 0 Z-trim(110.2): 265  B-trim: 2500 in 3/51
 Lambda= 0.159343
 statistics sampled from 18143 (18461) to 18143 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.588), E-opt: 0.2 (0.216), width:  16
 Scan time:  7.200

The best scores are:                                      opt bits E(85289)
NP_112581 (OMIM: 610796) ADP/ATP translocase 4 iso ( 315) 2093 490.3 2.2e-138
NP_001305396 (OMIM: 610796) ADP/ATP translocase 4  ( 272) 1680 395.3 7.4e-110
NP_001142 (OMIM: 103220,609283,615418) ADP/ATP tra ( 298) 1456 343.8 2.5e-94
NP_001627 (OMIM: 300151,403000) ADP/ATP translocas ( 298) 1441 340.4 2.8e-93
NP_001143 (OMIM: 300150) ADP/ATP translocase 2 [Ho ( 298) 1426 336.9   3e-92
XP_011530600 (OMIM: 610796) PREDICTED: ADP/ATP tra ( 224)  873 209.7 4.5e-54
NP_001308473 (OMIM: 610823) mitochondrial coenzyme ( 318)  418 105.2 1.8e-22
XP_005259918 (OMIM: 610823) PREDICTED: mitochondri ( 318)  418 105.2 1.8e-22
NP_848621 (OMIM: 610823) mitochondrial coenzyme A  ( 318)  418 105.2 1.8e-22
XP_011526239 (OMIM: 610823) PREDICTED: mitochondri ( 318)  418 105.2 1.8e-22
XP_016882159 (OMIM: 610823) PREDICTED: mitochondri ( 382)  418 105.3 2.1e-22
NP_660348 (OMIM: 300641) solute carrier family 25  ( 341)  369 94.0 4.7e-19
NP_001269127 (OMIM: 300242) brain mitochondrial ca ( 290)  343 88.0 2.6e-17
NP_001269125 (OMIM: 300242) brain mitochondrial ca ( 322)  343 88.0 2.8e-17
NP_001269124 (OMIM: 300242) brain mitochondrial ca ( 325)  343 88.0 2.8e-17
XP_011529704 (OMIM: 300242) PREDICTED: brain mitoc ( 334)  343 88.0 2.9e-17
XP_016885425 (OMIM: 300242) PREDICTED: brain mitoc ( 306)  337 86.6 7.1e-17
XP_016885428 (OMIM: 300242) PREDICTED: brain mitoc ( 338)  337 86.6 7.6e-17
XP_016885427 (OMIM: 300242) PREDICTED: brain mitoc ( 341)  337 86.6 7.7e-17
XP_016885426 (OMIM: 300242) PREDICTED: brain mitoc ( 350)  337 86.6 7.8e-17
XP_011535590 (OMIM: 607571) PREDICTED: mitochondri ( 269)  306 79.4 8.9e-15
XP_011535589 (OMIM: 607571) PREDICTED: mitochondri ( 303)  306 79.5 9.8e-15
NP_689920 (OMIM: 139080) graves disease carrier pr ( 332)  305 79.3 1.2e-14
XP_011538513 (OMIM: 139080) PREDICTED: graves dise ( 332)  305 79.3 1.2e-14
XP_016884830 (OMIM: 300641) PREDICTED: solute carr ( 231)  300 78.0 2.1e-14
XP_016884829 (OMIM: 300641) PREDICTED: solute carr ( 258)  300 78.0 2.3e-14
NP_110407 (OMIM: 610815,616839) mitochondrial fola ( 315)  299 77.9 3.1e-14
NP_001190980 (OMIM: 613725) mitochondrial uncoupli ( 300)  297 77.4 4.1e-14
XP_005249540 (OMIM: 613725) PREDICTED: mitochondri ( 310)  297 77.4 4.2e-14
XP_016876013 (OMIM: 610793) PREDICTED: kidney mito ( 291)  285 74.6 2.7e-13
NP_001010875 (OMIM: 610793) kidney mitochondrial c ( 291)  285 74.6 2.7e-13
XP_011535591 (OMIM: 607571) PREDICTED: mitochondri ( 267)  271 71.4 2.4e-12
NP_001098117 (OMIM: 616149) solute carrier family  ( 311)  270 71.2 3.1e-12
NP_001273735 (OMIM: 610793) kidney mitochondrial c ( 240)  265 70.0 5.6e-12
XP_005257616 (OMIM: 606521,607196,613710) PREDICTE ( 320)  262 69.4 1.1e-11
XP_006722070 (OMIM: 606521,607196,613710) PREDICTE ( 320)  262 69.4 1.1e-11
XP_005257618 (OMIM: 606521,607196,613710) PREDICTE ( 320)  262 69.4 1.1e-11
NP_068380 (OMIM: 606521,607196,613710) mitochondri ( 320)  262 69.4 1.1e-11
NP_001119593 (OMIM: 606521,607196,613710) mitochon ( 320)  262 69.4 1.1e-11
XP_016880415 (OMIM: 606521,607196,613710) PREDICTE ( 320)  262 69.4 1.1e-11
XP_005257619 (OMIM: 606521,607196,613710) PREDICTE ( 320)  262 69.4 1.1e-11
NP_001119594 (OMIM: 606521,607196,613710) mitochon ( 320)  262 69.4 1.1e-11
XP_005257617 (OMIM: 606521,607196,613710) PREDICTE ( 320)  262 69.4 1.1e-11
XP_005263263 (OMIM: 113730,601665) PREDICTED: mito ( 306)  257 68.2 2.4e-11
NP_060625 (OMIM: 616149) solute carrier family 25  ( 310)  256 68.0 2.9e-11
XP_016882780 (OMIM: 608746) PREDICTED: calcium-bin ( 376)  251 66.9 7.4e-11
XP_016882778 (OMIM: 608746) PREDICTED: calcium-bin ( 423)  251 66.9   8e-11
XP_016882776 (OMIM: 608746) PREDICTED: calcium-bin ( 485)  251 67.0 8.9e-11
XP_011526581 (OMIM: 608746) PREDICTED: calcium-bin ( 532)  251 67.0 9.6e-11
XP_011530530 (OMIM: 113730,601665) PREDICTED: mito ( 277)  245 65.4 1.5e-10


>>NP_112581 (OMIM: 610796) ADP/ATP translocase 4 isoform  (315 aa)
 initn: 2093 init1: 2093 opt: 2093  Z-score: 2605.5  bits: 490.3 E(85289): 2.2e-138
Smith-Waterman score: 2093; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)

               10        20        30        40        50        60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
              250       260       270       280       290       300

              310     
pF1KE0 YDKIKEFFHIDIGGR
       :::::::::::::::
NP_112 YDKIKEFFHIDIGGR
              310     

>>NP_001305396 (OMIM: 610796) ADP/ATP translocase 4 isof  (272 aa)
 initn: 1680 init1: 1680 opt: 1680  Z-score: 2093.2  bits: 395.3 E(85289): 7.4e-110
Smith-Waterman score: 1680; 100.0% identity (100.0% similar) in 253 aa overlap (1-253:1-253)

               10        20        30        40        50        60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
       :::::::::::::                                               
NP_001 YPFDTVRRRMMMQVINFLINYNSKLHLKNLEW                            
              250       260       270                              

>>NP_001142 (OMIM: 103220,609283,615418) ADP/ATP translo  (298 aa)
 initn: 1449 init1: 1262 opt: 1456  Z-score: 1814.4  bits: 343.8 E(85289): 2.5e-94
Smith-Waterman score: 1456; 73.7% identity (91.5% similar) in 293 aa overlap (17-307:5-297)

               10        20        30        40        50        60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
                       : :: ::.::::::::::::::::::::::::::: .::::: :
NP_001             MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAE
                           10        20        30        40        

               70        80        90       100       110       120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
        .:::..::.::::.::::.:::::::::::::::::::::::::::::::..::...::
NP_001 KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQ
       50        60        70        80        90       100        

              130       140       150       160       170       180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
       :::.: .:::::::::::::: :::::::::::..:.:::  .:.:.::::::.:: :::
NP_001 FWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSD
      110       120       130       140       150       160        

              190       200       210       220       230       240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
       :. ::::::.:::::::.:::.:::.:::.::.:: ::.. ..::..::: ::. .:..:
NP_001 GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVS
      170       180       190       200       210       220        

              250         260       270       280       290        
pF1KE0 YPFDTVRRRMMMQSGE--AKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVL
       :::::::::::::::.  :  .: ::.::. :: . :: ..::.::.:::::: :::.::
NP_001 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVL
      230       240       250       260       270       280        

      300       310     
pF1KE0 VLYDKIKEFFHIDIGGR
       ::::.::..        
NP_001 VLYDEIKKYV       
      290               

>>NP_001627 (OMIM: 300151,403000) ADP/ATP translocase 3   (298 aa)
 initn: 1434 init1: 1252 opt: 1441  Z-score: 1795.8  bits: 340.4 E(85289): 2.8e-93
Smith-Waterman score: 1441; 72.3% identity (92.1% similar) in 292 aa overlap (17-306:5-296)

               10        20        30        40        50        60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
                       : ::.::.::::.:::.:::::::::::::::::: .::::. .
NP_001             MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAAD
                           10        20        30        40        

               70        80        90       100       110       120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
        .:::.:::.::::.::: .:::::::::::::::::::::::::::::.:..::.:. :
NP_001 KQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQ
       50        60        70        80        90       100        

              130       140       150       160       170       180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
       :::.: .:::::::::::::: :::::::::::..:.::.  ::.:.:::::..::.:::
NP_001 FWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSD
      110       120       130       140       150       160        

              190       200       210       220       230       240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
       :: ::::::.:::::::.:::.:::.:::.::.:: ::.: ..::..:::.::. .:..:
NP_001 GIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVS
      170       180       190       200       210       220        

              250         260       270       280       290        
pF1KE0 YPFDTVRRRMMMQSGE--AKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVL
       :::::::::::::::.  :  .: ::.::. ::.. :: ..::.::.:::::: :::.::
NP_001 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVL
      230       240       250       260       270       280        

      300       310     
pF1KE0 VLYDKIKEFFHIDIGGR
       ::::..:.         
NP_001 VLYDELKKVI       
      290               

>>NP_001143 (OMIM: 300150) ADP/ATP translocase 2 [Homo s  (298 aa)
 initn: 1423 init1: 1236 opt: 1426  Z-score: 1777.1  bits: 336.9 E(85289): 3e-92
Smith-Waterman score: 1426; 71.7% identity (90.1% similar) in 293 aa overlap (17-307:5-297)

               10        20        30        40        50        60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
                       : ::.::.::::::::.:::::::::::::::::: .::::. .
NP_001             MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITAD
                           10        20        30        40        

               70        80        90       100       110       120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
        .:::..::.::::.::: .:::::::::::::::::::::::::::::.:..::.:. :
NP_001 KQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQ
       50        60        70        80        90       100        

              130       140       150       160       170       180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
       :: .: .:::::::::::::: :::::::::::..:.::.  ::.:.:::::..:: :::
NP_001 FWLYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSD
      110       120       130       140       150       160        

              190       200       210       220       230       240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
       :: ::::::.:::::::.:::.::: :::.::.:: ::.: ...:..:::.::. .:. :
NP_001 GIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTS
      170       180       190       200       210       220        

              250       260         270       280       290        
pF1KE0 YPFDTVRRRMMMQSGEAKRQ--YKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVL
       :::::::::::::::.   .  : :::::. :: . :: ..::.::.:::::: :::.::
NP_001 YPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVL
      230       240       250       260       270       280        

      300       310     
pF1KE0 VLYDKIKEFFHIDIGGR
       ::::.::..        
NP_001 VLYDEIKKYT       
      290               

>>XP_011530600 (OMIM: 610796) PREDICTED: ADP/ATP translo  (224 aa)
 initn: 856 init1: 781 opt: 873  Z-score: 1091.7  bits: 209.7 E(85289): 4.5e-54
Smith-Waterman score: 1283; 71.1% identity (71.1% similar) in 315 aa overlap (1-315:1-224)

               10        20        30        40        50        60
pF1KE0 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
                                                                   
XP_011 ------------------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KE0 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
                                      :::::::::::::::::::::::::::::
XP_011 -------------------------------GLLPKPKKTPFLVSFFIAQVVTTCSGILS
                                             130       140         

              250       260       270       280       290       300
pF1KE0 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVL
     150       160       170       180       190       200         

              310     
pF1KE0 YDKIKEFFHIDIGGR
       :::::::::::::::
XP_011 YDKIKEFFHIDIGGR
     210       220    

>>NP_001308473 (OMIM: 610823) mitochondrial coenzyme A t  (318 aa)
 initn: 359 init1: 115 opt: 418  Z-score: 524.4  bits: 105.2 E(85289): 1.8e-22
Smith-Waterman score: 418; 31.3% identity (65.5% similar) in 278 aa overlap (24-291:37-295)

                      10        20        30        40        50   
pF1KE0        MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQAS
                                     ::.:..:.:..::::::..:.:...::  :
NP_001 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
         10        20        30        40        50        60      

            60        70        80        90       100       110   
pF1KE0 SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMS
       ::..: .  ..     :     ..::.:.:::: :...:  :  :..:. ...::... :
NP_001 SKRFSAKEAFR----VLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
           70            80        90       100       110       120

            120       130       140       150       160       170  
pF1KE0 GVN-KEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDC
         . . . .  :    : .:. ::.:.  ..::::..:.:..:     :.: .....   
NP_001 YYGFRGEALPPW--PRLFAGALAGTTAASLTYPLDLVRARMAVT----PKE-MYSNIFHV
              130         140       150       160            170   

            180       190       200       210         220       230
pF1KE0 IMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPK--PKKTPFLVSFFIAQ
       ...:.. .:.  ::.::  .: :.: : .  : .:.:.:.:  .   .. :.    :  .
NP_001 FIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYP---FERM
           180       190       200       210       220          230

                  240       250         260       270        280   
pF1KE0 VVTTCSGIL----SYPFDTVRRRMMMQ--SGEAKRQYKGTLDCFVKIYQHEG-ISSFFRG
       .  .:.:..    :::.:.:::::.    .:  . .   ::  .:.   .:: . ....:
NP_001 IFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR---EEGAVRGLYKG
              240       250       260       270          280       

           290       300       310     
pF1KE0 AFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR
          : ..:                        
NP_001 LSMNWVKGPIAVGISFTTFDLMQILLRHLQS 
       290       300       310         

>>XP_005259918 (OMIM: 610823) PREDICTED: mitochondrial c  (318 aa)
 initn: 359 init1: 115 opt: 418  Z-score: 524.4  bits: 105.2 E(85289): 1.8e-22
Smith-Waterman score: 418; 31.3% identity (65.5% similar) in 278 aa overlap (24-291:37-295)

                      10        20        30        40        50   
pF1KE0        MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQAS
                                     ::.:..:.:..::::::..:.:...::  :
XP_005 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
         10        20        30        40        50        60      

            60        70        80        90       100       110   
pF1KE0 SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMS
       ::..: .  ..     :     ..::.:.:::: :...:  :  :..:. ...::... :
XP_005 SKRFSAKEAFR----VLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
           70            80        90       100       110       120

            120       130       140       150       160       170  
pF1KE0 GVN-KEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDC
         . . . .  :    : .:. ::.:.  ..::::..:.:..:     :.: .....   
XP_005 YYGFRGEALPPW--PRLFAGALAGTTAASLTYPLDLVRARMAVT----PKE-MYSNIFHV
              130         140       150       160            170   

            180       190       200       210         220       230
pF1KE0 IMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPK--PKKTPFLVSFFIAQ
       ...:.. .:.  ::.::  .: :.: : .  : .:.:.:.:  .   .. :.    :  .
XP_005 FIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYP---FERM
           180       190       200       210       220          230

                  240       250         260       270        280   
pF1KE0 VVTTCSGIL----SYPFDTVRRRMMMQ--SGEAKRQYKGTLDCFVKIYQHEG-ISSFFRG
       .  .:.:..    :::.:.:::::.    .:  . .   ::  .:.   .:: . ....:
XP_005 IFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR---EEGAVRGLYKG
              240       250       260       270          280       

           290       300       310     
pF1KE0 AFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR
          : ..:                        
XP_005 LSMNWVKGPIAVGISFTTFDLMQILLRHLQS 
       290       300       310         

>>NP_848621 (OMIM: 610823) mitochondrial coenzyme A tran  (318 aa)
 initn: 359 init1: 115 opt: 418  Z-score: 524.4  bits: 105.2 E(85289): 1.8e-22
Smith-Waterman score: 418; 31.3% identity (65.5% similar) in 278 aa overlap (24-291:37-295)

                      10        20        30        40        50   
pF1KE0        MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQAS
                                     ::.:..:.:..::::::..:.:...::  :
NP_848 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
         10        20        30        40        50        60      

            60        70        80        90       100       110   
pF1KE0 SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMS
       ::..: .  ..     :     ..::.:.:::: :...:  :  :..:. ...::... :
NP_848 SKRFSAKEAFR----VLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
           70            80        90       100       110       120

            120       130       140       150       160       170  
pF1KE0 GVN-KEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDC
         . . . .  :    : .:. ::.:.  ..::::..:.:..:     :.: .....   
NP_848 YYGFRGEALPPW--PRLFAGALAGTTAASLTYPLDLVRARMAVT----PKE-MYSNIFHV
              130         140       150       160            170   

            180       190       200       210         220       230
pF1KE0 IMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPK--PKKTPFLVSFFIAQ
       ...:.. .:.  ::.::  .: :.: : .  : .:.:.:.:  .   .. :.    :  .
NP_848 FIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYP---FERM
           180       190       200       210       220          230

                  240       250         260       270        280   
pF1KE0 VVTTCSGIL----SYPFDTVRRRMMMQ--SGEAKRQYKGTLDCFVKIYQHEG-ISSFFRG
       .  .:.:..    :::.:.:::::.    .:  . .   ::  .:.   .:: . ....:
NP_848 IFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR---EEGAVRGLYKG
              240       250       260       270          280       

           290       300       310     
pF1KE0 AFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR
          : ..:                        
NP_848 LSMNWVKGPIAVGISFTTFDLMQILLRHLQS 
       290       300       310         

>>XP_011526239 (OMIM: 610823) PREDICTED: mitochondrial c  (318 aa)
 initn: 359 init1: 115 opt: 418  Z-score: 524.4  bits: 105.2 E(85289): 1.8e-22
Smith-Waterman score: 418; 31.3% identity (65.5% similar) in 278 aa overlap (24-291:37-295)

                      10        20        30        40        50   
pF1KE0        MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQAS
                                     ::.:..:.:..::::::..:.:...::  :
XP_011 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
         10        20        30        40        50        60      

            60        70        80        90       100       110   
pF1KE0 SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMS
       ::..: .  ..     :     ..::.:.:::: :...:  :  :..:. ...::... :
XP_011 SKRFSAKEAFR----VLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
           70            80        90       100       110       120

            120       130       140       150       160       170  
pF1KE0 GVN-KEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDC
         . . . .  :    : .:. ::.:.  ..::::..:.:..:     :.: .....   
XP_011 YYGFRGEALPPW--PRLFAGALAGTTAASLTYPLDLVRARMAVT----PKE-MYSNIFHV
              130         140       150       160            170   

            180       190       200       210         220       230
pF1KE0 IMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPK--PKKTPFLVSFFIAQ
       ...:.. .:.  ::.::  .: :.: : .  : .:.:.:.:  .   .. :.    :  .
XP_011 FIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYP---FERM
           180       190       200       210       220          230

                  240       250         260       270        280   
pF1KE0 VVTTCSGIL----SYPFDTVRRRMMMQ--SGEAKRQYKGTLDCFVKIYQHEG-ISSFFRG
       .  .:.:..    :::.:.:::::.    .:  . .   ::  .:.   .:: . ....:
XP_011 IFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR---EEGAVRGLYKG
              240       250       260       270          280       

           290       300       310     
pF1KE0 AFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR
          : ..:                        
XP_011 LSMNWVKGPIAVGISFTTFDLMQILLRHLQS 
       290       300       310         




315 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 00:11:35 2016 done: Fri Nov  4 00:11:37 2016
 Total Scan time:  7.200 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com