(Linear) (Six-base) MAPSORT of: KIAA1063.seq Check: 5376 from: 1 to: 1575 KIAA1063.orf With 182 enzymes: SgfI * July 15, 2010 18:28 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 937 1575 Size: 937 638 AatII G_ACGT'C Cuts at: 0 926 1520 1575 Size: 926 594 55 Fragments arranged by size: 926 594 55 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 493 1575 Size: 493 1082 AflIII A'CryG_T Cuts at: 0 1064 1575 Size: 1064 511 AgeI A'CCGG_T Cuts at: 0 704 1575 Size: 704 871 AleI CACnn'nnGTG Cuts at: 0 629 1273 1575 Size: 629 644 302 Fragments arranged by size: 644 629 302 AlwNI CAG_nnn'CTG Cuts at: 0 111 579 653 1563 1575 Size: 111 468 74 910 12 Fragments arranged by size: 910 468 111 74 12 AvaI C'yCGr_G Cuts at: 0 19 1575 Size: 19 1556 BanI G'GyrC_C Cuts at: 0 623 758 1575 Size: 623 135 817 Fragments arranged by size: 817 623 135 BanII G_rGCy'C Cuts at: 0 20 646 1027 1575 Size: 20 626 381 548 Fragments arranged by size: 626 548 381 20 BbsI GAAGACnn'nnnn_ Cuts at: 0 231 1575 Size: 231 1344 BbvCI CC'TCA_GC Cuts at: 0 152 1575 Size: 152 1423 BclI T'GATC_A Cuts at: 0 533 1575 Size: 533 1042 BglI GCCn_nnn'nGGC Cuts at: 0 46 1575 Size: 46 1529 BglII A'GATC_T Cuts at: 0 896 1575 Size: 896 679 BmgBI CAC'GTC Cuts at: 0 816 1575 Size: 816 759 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 690 711 1575 Size: 690 21 864 Fragments arranged by size: 864 690 21 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1302 1309 1575 Size: 1302 7 266 Fragments arranged by size: 1302 266 7 Bpu10I CC'TnA_GC Cuts at: 0 152 1021 1575 Size: 152 869 554 Fragments arranged by size: 869 554 152 BsaAI yAC'GTr Cuts at: 0 1065 1271 1575 Size: 1065 206 304 Fragments arranged by size: 1065 304 206 BsaHI Gr'CG_yC Cuts at: 0 38 200 785 923 1517 1575 Size: 38 162 585 138 594 58 Fragments arranged by size: 594 585 162 138 58 38 BsaWI w'CCGG_w Cuts at: 0 704 1575 Size: 704 871 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 403 1575 Size: 403 1172 BseYI C'CCAG_C Cuts at: 0 646 1575 Size: 646 929 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 495 592 718 1167 1575 Size: 495 97 126 449 408 Fragments arranged by size: 495 449 408 126 97 BsiHKAI G_wGCw'C Cuts at: 0 821 1121 1575 Size: 821 300 454 Fragments arranged by size: 821 454 300 BsmI GAATG_Cn' Cuts at: 0 219 1575 Size: 219 1356 Bsp1286I G_dGCh'C Cuts at: 0 20 646 821 1027 1121 1575 Size: 20 626 175 206 94 454 Fragments arranged by size: 626 454 206 175 94 20 BspHI T'CATG_A Cuts at: 0 557 1575 Size: 557 1018 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 119 937 1575 Size: 119 818 638 Fragments arranged by size: 818 638 119 BsrBI CCG'CTC Cuts at: 0 143 1575 Size: 143 1432 BsrFI r'CCGG_y Cuts at: 0 704 1575 Size: 704 871 BssSI C'ACGA_G Cuts at: 0 271 790 1575 Size: 271 519 785 Fragments arranged by size: 785 519 271 BstAPI GCAn_nnn'nTGC Cuts at: 0 111 1154 1575 Size: 111 1043 421 Fragments arranged by size: 1043 421 111 BstXI CCAn_nnnn'nTGG Cuts at: 0 196 1575 Size: 196 1379 BstYI r'GATC_y Cuts at: 0 896 987 1575 Size: 896 91 588 Fragments arranged by size: 896 588 91 BtgI C'CryG_G Cuts at: 0 32 942 1358 1575 Size: 32 910 416 217 Fragments arranged by size: 910 416 217 32 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 786 1575 Size: 786 789 BtsI GCAGTG_nn' Cuts at: 0 828 873 1575 Size: 828 45 702 Fragments arranged by size: 828 702 45 DraIII CAC_nnn'GTG Cuts at: 0 741 1575 Size: 741 834 EaeI y'GGCC_r Cuts at: 0 10 302 1431 1575 Size: 10 292 1129 144 Fragments arranged by size: 1129 292 144 10 EarI CTCTTCn'nnn_ Cuts at: 0 1005 1575 Size: 1005 570 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 1272 1575 Size: 1272 303 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 493 1302 1309 1575 Size: 493 809 7 266 Fragments arranged by size: 809 493 266 7 EcoO109I rG'GnC_Cy Cuts at: 0 576 1418 1575 Size: 576 842 157 Fragments arranged by size: 842 576 157 HaeII r_GCGC'y Cuts at: 0 58 1136 1575 Size: 58 1078 439 Fragments arranged by size: 1078 439 58 HincII GTy'rAC Cuts at: 0 1407 1575 Size: 1407 168 HindIII A'AGCT_T Cuts at: 0 401 1575 Size: 401 1174 HpaI GTT'AAC Cuts at: 0 1407 1575 Size: 1407 168 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 402 1575 Size: 402 1173 MscI TGG'CCA Cuts at: 0 304 1433 1575 Size: 304 1129 142 Fragments arranged by size: 1129 304 142 MslI CAynn'nnrTG Cuts at: 0 194 275 629 1273 1575 Size: 194 81 354 644 302 Fragments arranged by size: 644 354 302 194 81 MspA1I CmG'CkG Cuts at: 0 629 1151 1575 Size: 629 522 424 Fragments arranged by size: 629 522 424 NcoI C'CATG_G Cuts at: 0 32 942 1575 Size: 32 910 633 Fragments arranged by size: 910 633 32 NspI r_CATG'y Cuts at: 0 280 554 1575 Size: 280 274 1021 Fragments arranged by size: 1021 280 274 PasI CC'CwG_GG Cuts at: 0 1027 1575 Size: 1027 548 PfoI T'CCnGG_A Cuts at: 0 1520 1562 1575 Size: 1520 42 13 Fragments arranged by size: 1520 42 13 PmlI CAC'GTG Cuts at: 0 1065 1575 Size: 1065 510 PpuMI rG'GwC_Cy Cuts at: 0 1418 1575 Size: 1418 157 PshAI GACnn'nnGTC Cuts at: 0 705 1575 Size: 705 870 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 1528 1560 1575 Size: 1528 32 15 Fragments arranged by size: 1528 32 15 SapI GCTCTTCn'nnn_ Cuts at: 0 1005 1575 Size: 1005 570 SexAI A'CCwGG_T Cuts at: 0 737 1575 Size: 737 838 SphI G_CATG'C Cuts at: 0 280 1575 Size: 280 1295 StyI C'CwwG_G Cuts at: 0 32 383 540 942 1421 1499 1575 Size: 32 351 157 402 479 78 76 Fragments arranged by size: 479 402 351 157 78 76 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 654 940 1575 Size: 654 286 635 Fragments arranged by size: 654 635 286 ZraI GAC'GTC Cuts at: 0 924 1518 1575 Size: 924 594 57 Fragments arranged by size: 924 594 57 Enzymes that do cut: AarI AatII AcuI AflIII AgeI AleI AlwNI AvaI BanI BanII BbsI BbvCI BclI BglI BglII BmgBI BplI BpmI Bpu10I BsaAI BsaHI BsaWI BseRI BseYI BsgI BsiHKAI BsmI Bsp1286I BspHI BspMI BsrBI BsrFI BssSI BstAPI BstXI BstYI BtgI BtgZI BtsI DraIII EaeI EarI EciI Eco57MI EcoO109I HaeII HincII HindIII HpaI MmeI MscI MslI MspA1I NcoI NspI PasI PfoI PmlI PpuMI PshAI PsrI SapI SexAI SphI StyI XcmI ZraI Enzymes that do not cut: AccI Acc65I AclI AfeI AflII AhdI AlfI AloI ApaI ApaLI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbeI BcgI BciVI BfrBI BlpI Bme1580I BmrI BmtI BpuEI BsaI BsaBI BsaXI BsiEI BsiWI BsmBI BspEI BsrDI BsrGI BssHII BstBI BstEII BstZ17I Bsu36I ClaI CspCI DraI DrdI EagI EcoICRI EcoNI EcoRI EcoRV FalI FseI FspI FspAI Hin4I KasI KpnI MfeI MluI NaeI NarI NdeI NgoMIV NheI NotI NruI NsiI PacI PciI PflMI PmeI PpiI PsiI PspOMI PspXI PstI PvuI PvuII RsrII SacI SacII SalI SanDI SbfI ScaI SfcI SfiI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SrfI SspI StuI SwaI TaqII TatI TstI Tth111I XbaI XhoI XmaI XmnI