Result of FASTA (omim) for
pFN21AB6336
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6336, 290 aa
1>>>pF1KB6336 290 - 290 aa - 290 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1339+/-0.000305; mu= 5.3190+/- 0.019
mean_var=222.1474+/-43.143, 0's: 0 Z-trim(123.9): 72 B-trim: 50 in 1/57
Lambda= 0.086051
statistics sampled from 44517 (44614) to 44517 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.523), width: 16
Scan time: 7.490
The best scores are: opt bits E(85289)
NP_001116293 (OMIM: 600960) protein SET isoform 1 ( 290) 1968 256.1 5.9e-68
XP_016870504 (OMIM: 600960) PREDICTED: protein SET ( 309) 1920 250.1 3.9e-66
XP_016870503 (OMIM: 600960) PREDICTED: protein SET ( 309) 1920 250.1 3.9e-66
XP_016870502 (OMIM: 600960) PREDICTED: protein SET ( 309) 1920 250.1 3.9e-66
NP_003002 (OMIM: 600960) protein SET isoform 2 [Ho ( 277) 1715 224.6 1.6e-58
NP_001234930 (OMIM: 600960) protein SET isoform 4 ( 266) 1712 224.2 2.1e-58
NP_001234929 (OMIM: 600960) protein SET isoform 3 ( 268) 1708 223.7 2.9e-58
XP_016870505 (OMIM: 600960) PREDICTED: protein SET ( 296) 1667 218.7 1.1e-56
NP_277047 (OMIM: 614721) testis-specific Y-encoded ( 417) 418 63.8 6.5e-10
NP_071400 (OMIM: 300564) testis-specific Y-encoded ( 693) 403 62.1 3.4e-09
XP_006724655 (OMIM: 300564) PREDICTED: testis-spec ( 694) 403 62.1 3.4e-09
NP_003300 (OMIM: 604714,608800) testis-specific Y- ( 437) 378 58.8 2.1e-08
NP_001184171 (OMIM: 480100) testis-specific Y-enco ( 294) 336 53.5 5.9e-07
NP_003299 (OMIM: 480100) testis-specific Y-encoded ( 308) 336 53.5 6.1e-07
XP_016885553 (OMIM: 480100) PREDICTED: testis-spec ( 288) 317 51.1 3e-06
NP_001307893 (OMIM: 480100) testis-specific Y-enco ( 221) 303 49.2 8.2e-06
>>NP_001116293 (OMIM: 600960) protein SET isoform 1 [Hom (290 aa)
initn: 1968 init1: 1968 opt: 1968 Z-score: 1340.9 bits: 256.1 E(85289): 5.9e-68
Smith-Waterman score: 1968; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290)
10 20 30 40 50 60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
250 260 270 280 290
>>XP_016870504 (OMIM: 600960) PREDICTED: protein SET iso (309 aa)
initn: 2022 init1: 1920 opt: 1920 Z-score: 1308.4 bits: 250.1 E(85289): 3.9e-66
Smith-Waterman score: 1920; 99.3% identity (99.3% similar) in 286 aa overlap (1-286:1-286)
10 20 30 40 50 60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
::::::::::::::::::::::::::::::::::::::::::: :
XP_016 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEVKENLAKPTKITFKEFM
250 260 270 280 290 300
XP_016 LFWGVYIYI
>>XP_016870503 (OMIM: 600960) PREDICTED: protein SET iso (309 aa)
initn: 2022 init1: 1920 opt: 1920 Z-score: 1308.4 bits: 250.1 E(85289): 3.9e-66
Smith-Waterman score: 1920; 99.3% identity (99.3% similar) in 286 aa overlap (1-286:1-286)
10 20 30 40 50 60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
::::::::::::::::::::::::::::::::::::::::::: :
XP_016 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEVKENLAKPTKITFKEFM
250 260 270 280 290 300
XP_016 LFWGVYIYI
>>XP_016870502 (OMIM: 600960) PREDICTED: protein SET iso (309 aa)
initn: 2022 init1: 1920 opt: 1920 Z-score: 1308.4 bits: 250.1 E(85289): 3.9e-66
Smith-Waterman score: 1920; 99.3% identity (99.3% similar) in 286 aa overlap (1-286:1-286)
10 20 30 40 50 60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
::::::::::::::::::::::::::::::::::::::::::: :
XP_016 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEVKENLAKPTKITFKEFM
250 260 270 280 290 300
XP_016 LFWGVYIYI
>>NP_003002 (OMIM: 600960) protein SET isoform 2 [Homo s (277 aa)
initn: 1715 init1: 1715 opt: 1715 Z-score: 1171.4 bits: 224.6 E(85289): 1.6e-58
Smith-Waterman score: 1715; 96.2% identity (97.4% similar) in 266 aa overlap (25-290:12-277)
10 20 30 40 50 60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
: .: : . .:::::::::::::::::::::::
NP_003 MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNE
10 20 30 40
70 80 90 100 110 120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
170 180 190 200 210 220
250 260 270 280 290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
230 240 250 260 270
>>NP_001234930 (OMIM: 600960) protein SET isoform 4 [Hom (266 aa)
initn: 1712 init1: 1712 opt: 1712 Z-score: 1169.7 bits: 224.2 E(85289): 2.1e-58
Smith-Waterman score: 1712; 98.8% identity (98.8% similar) in 257 aa overlap (34-290:10-266)
10 20 30 40 50 60
pF1KB6 KRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNEQAS
: ::::::::::::::::::::::::::
NP_001 MMPRSHQPPPPPHEKEQQEAIEHIDEVQNEIDRLNEQAS
10 20 30
70 80 90 100 110 120
pF1KB6 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
160 170 180 190 200 210
250 260 270 280 290
pF1KB6 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
220 230 240 250 260
>>NP_001234929 (OMIM: 600960) protein SET isoform 3 [Hom (268 aa)
initn: 1706 init1: 1706 opt: 1708 Z-score: 1166.9 bits: 223.7 E(85289): 2.9e-58
Smith-Waterman score: 1708; 98.8% identity (98.8% similar) in 257 aa overlap (34-290:12-268)
10 20 30 40 50 60
pF1KB6 KRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNEQAS
: ::::::::::::::::::::::::::
NP_001 MGCRDLLPSLKPTLLEKEQQEAIEHIDEVQNEIDRLNEQAS
10 20 30 40
70 80 90 100 110 120
pF1KB6 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
170 180 190 200 210 220
250 260 270 280 290
pF1KB6 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
230 240 250 260
>>XP_016870505 (OMIM: 600960) PREDICTED: protein SET iso (296 aa)
initn: 1760 init1: 1658 opt: 1667 Z-score: 1138.9 bits: 218.7 E(85289): 1.1e-56
Smith-Waterman score: 1667; 95.4% identity (96.6% similar) in 262 aa overlap (25-286:12-273)
10 20 30 40 50 60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
: .: : . .:::::::::::::::::::::::
XP_016 MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNE
10 20 30 40
70 80 90 100 110 120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
170 180 190 200 210 220
250 260 270 280 290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
::::::::::::::::::::::::::::::::::::::::::: :
XP_016 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEVKENLAKPTKITFKEFM
230 240 250 260 270 280
XP_016 LFWGVYIYI
290
>>NP_277047 (OMIM: 614721) testis-specific Y-encoded-lik (417 aa)
initn: 561 init1: 386 opt: 418 Z-score: 299.0 bits: 63.8 E(85289): 6.5e-10
Smith-Waterman score: 555; 37.9% identity (68.8% similar) in 240 aa overlap (25-257:175-400)
10 20 30 40
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQ-------QEAIEH
:.::.::: :: :.. . ...
NP_277 AGKKAPETCSTAGRGPQVIAGGRQKKGAAGENTSVSAGEEKKEERDAGSGPPATEGSMDT
150 160 170 180 190 200
50 60 70 80 90 100
pF1KB6 IDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSA
...:: ... .: ::.. :.. .:...:: ...:..:: .::.:: .: ::::...
NP_277 LENVQLKLENMNAQADRAYLRLSRKFGQLRLQHLERRNHLIQNIPGFWGQAFQNHPQLAS
210 220 230 240 250 260
110 120 130 140 150 160
pF1KB6 LLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSK
.:. ...:.: ::. .:: :. . ::.: ::::.::::.:::: ::. . ::. :.
NP_277 FLNSQEKEVLSYLNSLEVEELGLARLGYKIKFYFDRNPYFQNKVLIKEYGCGPSGQVVSR
270 280 290 300 310 320
170 180 190 200 210 220
pF1KB6 STEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWP
:: :.: :.:: .: .:.. .: ::: ::..::. .:.. :.:....::
NP_277 STPIQWLPGHDL---QSLSQGNPENNR------SFFGWFSNHSSIESDKIVEIINEELWP
330 340 350 360 370
230 240 250 260 270 280
pF1KB6 NPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEG
::::.::. :: : . : ..:
NP_277 NPLQFYLLS-----EGARVEKGKEKEGRQGPGKQPMETTQPGVSQSN
380 390 400 410
>>NP_071400 (OMIM: 300564) testis-specific Y-encoded-lik (693 aa)
initn: 566 init1: 400 opt: 403 Z-score: 286.2 bits: 62.1 E(85289): 3.4e-09
Smith-Waterman score: 537; 38.3% identity (77.0% similar) in 196 aa overlap (40-234:210-396)
10 20 30 40 50 60
pF1KB6 PPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAI-EHIDEVQNEIDRLNEQASEEILK
:..:.: . ....: ... .: .:.. .:.
NP_071 RESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLR
180 190 200 210 220 230
70 80 90 100 110 120
pF1KB6 VEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEF
...:. ..:.::...:. .: .::.::: .:.:::..: :....::. ..::: ..: ..
NP_071 LKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDL
240 250 260 270 280 290
130 140 150 160 170 180
pF1KB6 EDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQN
. :. ::.. .::. :::: : :. :::. :.:: :.:: :.:. :..
NP_071 RHISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQE---------P
300 310 320 330 340 350
190 200 210 220 230 240
pF1KB6 KASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEED
.: :. ... .:::.::..:: ::...:.::.:.: :::.:::
NP_071 QARRHGNQDASHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEM
360 370 380 390 400 410
250 260 270 280 290
pF1KB6 DDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
NP_071 KKRKTRGRCEVVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFETTDNEIT
420 430 440 450 460 470
290 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:45:40 2016 done: Fri Nov 4 22:45:41 2016
Total Scan time: 7.490 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]