FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1302, 145 aa 1>>>pF1KE1302 145 - 145 aa - 145 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9145+/-0.000306; mu= 14.5151+/- 0.019 mean_var=78.5574+/-15.528, 0's: 0 Z-trim(119.1): 40 B-trim: 60 in 1/52 Lambda= 0.144704 statistics sampled from 32785 (32828) to 32785 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.385), width: 16 Scan time: 4.990 The best scores are: opt bits E(85289) NP_036532 (OMIM: 605630) group IID secretory phosp ( 145) 1110 240.2 9.1e-64 NP_001155200 (OMIM: 172411) phospholipase A2, memb ( 144) 520 117.0 1.1e-26 NP_001155201 (OMIM: 172411) phospholipase A2, memb ( 144) 520 117.0 1.1e-26 NP_001155199 (OMIM: 172411) phospholipase A2, memb ( 144) 520 117.0 1.1e-26 NP_000291 (OMIM: 172411) phospholipase A2, membran ( 144) 520 117.0 1.1e-26 XP_011539893 (OMIM: 228980,601192) PREDICTED: calc ( 138) 473 107.2 9.4e-24 XP_011539891 (OMIM: 228980,601192) PREDICTED: calc ( 138) 473 107.2 9.4e-24 XP_011539889 (OMIM: 228980,601192) PREDICTED: calc ( 138) 473 107.2 9.4e-24 XP_005245950 (OMIM: 228980,601192) PREDICTED: calc ( 138) 473 107.2 9.4e-24 XP_011539894 (OMIM: 228980,601192) PREDICTED: calc ( 138) 473 107.2 9.4e-24 XP_011539890 (OMIM: 228980,601192) PREDICTED: calc ( 138) 473 107.2 9.4e-24 XP_011539892 (OMIM: 228980,601192) PREDICTED: calc ( 138) 473 107.2 9.4e-24 NP_000920 (OMIM: 228980,601192) calcium-dependent ( 138) 473 107.2 9.4e-24 NP_073730 (OMIM: 616793) group IIF secretory phosp ( 211) 475 107.8 9.5e-24 XP_011540258 (OMIM: 616793) PREDICTED: group IIF s ( 211) 475 107.8 9.5e-24 XP_011539888 (OMIM: 228980,601192) PREDICTED: calc ( 169) 473 107.2 1.1e-23 XP_005245948 (OMIM: 228980,601192) PREDICTED: calc ( 169) 473 107.2 1.1e-23 XP_005245949 (OMIM: 228980,601192) PREDICTED: calc ( 169) 473 107.2 1.1e-23 NP_001258743 (OMIM: 605630) group IID secretory ph ( 62) 432 98.3 2e-21 NP_003552 (OMIM: 603603) group 10 secretory phosph ( 165) 383 88.4 4.8e-18 XP_011540257 (OMIM: 616793) PREDICTED: group IIF s ( 219) 351 81.9 6.1e-16 NP_000919 (OMIM: 172410) phospholipase A2 precurso ( 148) 325 76.3 2e-14 XP_011521000 (OMIM: 603603) PREDICTED: group 10 se ( 120) 277 66.2 1.8e-11 XP_011520999 (OMIM: 603603) PREDICTED: group 10 se ( 124) 277 66.2 1.8e-11 XP_011520998 (OMIM: 603603) PREDICTED: group 10 se ( 131) 277 66.2 1.9e-11 XP_011520997 (OMIM: 603603) PREDICTED: group 10 se ( 133) 277 66.2 1.9e-11 NP_001073868 (OMIM: 601658) otoconin-90 precursor ( 477) 271 65.5 1.1e-10 >>NP_036532 (OMIM: 605630) group IID secretory phospholi (145 aa) initn: 1110 init1: 1110 opt: 1110 Z-score: 1265.8 bits: 240.2 E(85289): 9.1e-64 Smith-Waterman score: 1110; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145) 10 20 30 40 50 60 pF1KE1 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK 70 80 90 100 110 120 130 140 pF1KE1 RNLDTYQKRLRFYWRPHCRGQTPGC ::::::::::::::::::::::::: NP_036 RNLDTYQKRLRFYWRPHCRGQTPGC 130 140 >>NP_001155200 (OMIM: 172411) phospholipase A2, membrane (144 aa) initn: 495 init1: 329 opt: 520 Z-score: 600.2 bits: 117.0 E(85289): 1.1e-26 Smith-Waterman score: 520; 46.9% identity (73.1% similar) in 145 aa overlap (1-145:1-144) 10 20 30 40 50 60 pF1KE1 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT :. :: ..... :.. .:...:...:.: .::: ::: ::::::.::::.::::: NP_001 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK : :: :::::: .:. .::. :... : . : :. . : :..::: ::: .: :. NP_001 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA 70 80 90 100 110 130 140 pF1KE1 RNLDTYQKRLRFYWRPHCRGQTPGC :: ::.:. ..: ::::.:: : NP_001 RNKTTYNKKYQYYSNKHCRGSTPRC 120 130 140 >>NP_001155201 (OMIM: 172411) phospholipase A2, membrane (144 aa) initn: 495 init1: 329 opt: 520 Z-score: 600.2 bits: 117.0 E(85289): 1.1e-26 Smith-Waterman score: 520; 46.9% identity (73.1% similar) in 145 aa overlap (1-145:1-144) 10 20 30 40 50 60 pF1KE1 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT :. :: ..... :.. .:...:...:.: .::: ::: ::::::.::::.::::: NP_001 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK : :: :::::: .:. .::. :... : . : :. . : :..::: ::: .: :. NP_001 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA 70 80 90 100 110 130 140 pF1KE1 RNLDTYQKRLRFYWRPHCRGQTPGC :: ::.:. ..: ::::.:: : NP_001 RNKTTYNKKYQYYSNKHCRGSTPRC 120 130 140 >>NP_001155199 (OMIM: 172411) phospholipase A2, membrane (144 aa) initn: 495 init1: 329 opt: 520 Z-score: 600.2 bits: 117.0 E(85289): 1.1e-26 Smith-Waterman score: 520; 46.9% identity (73.1% similar) in 145 aa overlap (1-145:1-144) 10 20 30 40 50 60 pF1KE1 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT :. :: ..... :.. .:...:...:.: .::: ::: ::::::.::::.::::: NP_001 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK : :: :::::: .:. .::. :... : . : :. . : :..::: ::: .: :. NP_001 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA 70 80 90 100 110 130 140 pF1KE1 RNLDTYQKRLRFYWRPHCRGQTPGC :: ::.:. ..: ::::.:: : NP_001 RNKTTYNKKYQYYSNKHCRGSTPRC 120 130 140 >>NP_000291 (OMIM: 172411) phospholipase A2, membrane as (144 aa) initn: 495 init1: 329 opt: 520 Z-score: 600.2 bits: 117.0 E(85289): 1.1e-26 Smith-Waterman score: 520; 46.9% identity (73.1% similar) in 145 aa overlap (1-145:1-144) 10 20 30 40 50 60 pF1KE1 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT :. :: ..... :.. .:...:...:.: .::: ::: ::::::.::::.::::: NP_000 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK : :: :::::: .:. .::. :... : . : :. . : :..::: ::: .: :. NP_000 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA 70 80 90 100 110 130 140 pF1KE1 RNLDTYQKRLRFYWRPHCRGQTPGC :: ::.:. ..: ::::.:: : NP_000 RNKTTYNKKYQYYSNKHCRGSTPRC 120 130 140 >>XP_011539893 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa) initn: 463 init1: 343 opt: 473 Z-score: 547.4 bits: 107.2 E(85289): 9.4e-24 Smith-Waterman score: 473; 45.3% identity (75.0% similar) in 128 aa overlap (12-138:11-137) 10 20 30 40 50 pF1KE1 MELALLCGLVVMAGVIP-IQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDA .: .: .:::.:.:..:...:::: . .: :::.:: :::: :::. XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 TDWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCL ::::: .:: :: .:. .::.: . :.: :. : . : . : .:. .:::::.....:: XP_011 TDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCL 60 70 80 90 100 110 120 130 140 pF1KE1 KRNLDTYQKRLRFYWRPHCRGQTPGC :::: .:. . ... : XP_011 KRNLRSYNPQYQYFPNILCS 120 130 >>XP_011539891 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa) initn: 463 init1: 343 opt: 473 Z-score: 547.4 bits: 107.2 E(85289): 9.4e-24 Smith-Waterman score: 473; 45.3% identity (75.0% similar) in 128 aa overlap (12-138:11-137) 10 20 30 40 50 pF1KE1 MELALLCGLVVMAGVIP-IQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDA .: .: .:::.:.:..:...:::: . .: :::.:: :::: :::. XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 TDWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCL ::::: .:: :: .:. .::.: . :.: :. : . : . : .:. .:::::.....:: XP_011 TDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCL 60 70 80 90 100 110 120 130 140 pF1KE1 KRNLDTYQKRLRFYWRPHCRGQTPGC :::: .:. . ... : XP_011 KRNLRSYNPQYQYFPNILCS 120 130 >>XP_011539889 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa) initn: 463 init1: 343 opt: 473 Z-score: 547.4 bits: 107.2 E(85289): 9.4e-24 Smith-Waterman score: 473; 45.3% identity (75.0% similar) in 128 aa overlap (12-138:11-137) 10 20 30 40 50 pF1KE1 MELALLCGLVVMAGVIP-IQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDA .: .: .:::.:.:..:...:::: . .: :::.:: :::: :::. XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 TDWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCL ::::: .:: :: .:. .::.: . :.: :. : . : . : .:. .:::::.....:: XP_011 TDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCL 60 70 80 90 100 110 120 130 140 pF1KE1 KRNLDTYQKRLRFYWRPHCRGQTPGC :::: .:. . ... : XP_011 KRNLRSYNPQYQYFPNILCS 120 130 >>XP_005245950 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa) initn: 463 init1: 343 opt: 473 Z-score: 547.4 bits: 107.2 E(85289): 9.4e-24 Smith-Waterman score: 473; 45.3% identity (75.0% similar) in 128 aa overlap (12-138:11-137) 10 20 30 40 50 pF1KE1 MELALLCGLVVMAGVIP-IQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDA .: .: .:::.:.:..:...:::: . .: :::.:: :::: :::. XP_005 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 TDWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCL ::::: .:: :: .:. .::.: . :.: :. : . : . : .:. .:::::.....:: XP_005 TDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCL 60 70 80 90 100 110 120 130 140 pF1KE1 KRNLDTYQKRLRFYWRPHCRGQTPGC :::: .:. . ... : XP_005 KRNLRSYNPQYQYFPNILCS 120 130 >>XP_011539894 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa) initn: 463 init1: 343 opt: 473 Z-score: 547.4 bits: 107.2 E(85289): 9.4e-24 Smith-Waterman score: 473; 45.3% identity (75.0% similar) in 128 aa overlap (12-138:11-137) 10 20 30 40 50 pF1KE1 MELALLCGLVVMAGVIP-IQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDA .: .: .:::.:.:..:...:::: . .: :::.:: :::: :::. XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 TDWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCL ::::: .:: :: .:. .::.: . :.: :. : . : . : .:. .:::::.....:: XP_011 TDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCL 60 70 80 90 100 110 120 130 140 pF1KE1 KRNLDTYQKRLRFYWRPHCRGQTPGC :::: .:. . ... : XP_011 KRNLRSYNPQYQYFPNILCS 120 130 145 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:40:57 2016 done: Mon Nov 7 03:40:58 2016 Total Scan time: 4.990 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]