Result of FASTA (omim) for pFN21AB6375
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6375, 270 aa
  1>>>pF1KB6375 270 - 270 aa - 270 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0251+/-0.000359; mu= 16.5130+/- 0.022
 mean_var=66.0627+/-13.130, 0's: 0 Z-trim(114.3): 24  B-trim: 601 in 1/52
 Lambda= 0.157796
 statistics sampled from 23984 (24008) to 23984 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.281), width:  16
 Scan time:  6.730

The best scores are:                                      opt bits E(85289)
NP_006215 (OMIM: 600174) phosphatidylinositol tran ( 270) 1861 432.3 4.5e-121
NP_036531 (OMIM: 606876) phosphatidylinositol tran ( 271) 1535 358.1 9.9e-99
NP_001271206 (OMIM: 606876) phosphatidylinositol t ( 272) 1522 355.1 7.7e-98
NP_001271207 (OMIM: 606876) phosphatidylinositol t ( 273) 1508 352.0 7.1e-97
XP_011528354 (OMIM: 606876) PREDICTED: phosphatidy ( 274) 1495 349.0 5.5e-96
XP_011522242 (OMIM: 600174) PREDICTED: phosphatidy ( 197) 1390 325.0 6.7e-89
XP_011522241 (OMIM: 600174) PREDICTED: phosphatidy ( 245) 1037 244.7 1.2e-64
XP_016884196 (OMIM: 606876) PREDICTED: phosphatidy ( 206)  841 200.0 2.9e-51
NP_001124320 (OMIM: 608794) membrane-associated ph (1243)  805 192.4 3.5e-48
XP_011543698 (OMIM: 608794) PREDICTED: membrane-as (1243)  805 192.4 3.5e-48
XP_016874075 (OMIM: 608794) PREDICTED: membrane-as (1244)  805 192.4 3.5e-48
NP_004901 (OMIM: 608794) membrane-associated phosp (1244)  805 192.4 3.5e-48
NP_001287730 (OMIM: 608920) membrane-associated ph (1343)  770 184.4 9.4e-46
NP_065896 (OMIM: 608920) membrane-associated phosp (1349)  770 184.4 9.4e-46
NP_858057 (OMIM: 605134) cytoplasmic phosphatidyli ( 268)  607 146.8 3.9e-35
NP_036549 (OMIM: 605134) cytoplasmic phosphatidyli ( 332)  600 145.3 1.4e-34
XP_011536892 (OMIM: 608920) PREDICTED: membrane-as (1382)  541 132.3 4.8e-30
XP_016879932 (OMIM: 605134) PREDICTED: cytoplasmic ( 258)  532 129.7 5.2e-30
XP_016879931 (OMIM: 605134) PREDICTED: cytoplasmic ( 322)  525 128.2 1.9e-29
XP_016879933 (OMIM: 605134) PREDICTED: cytoplasmic ( 245)  492 120.6 2.7e-27
XP_016879934 (OMIM: 605134) PREDICTED: cytoplasmic ( 245)  492 120.6 2.7e-27
XP_005257273 (OMIM: 605134) PREDICTED: cytoplasmic ( 309)  485 119.1   1e-26


>>NP_006215 (OMIM: 600174) phosphatidylinositol transfer  (270 aa)
 initn: 1861 init1: 1861 opt: 1861  Z-score: 2294.6  bits: 432.3 E(85289): 4.5e-121
Smith-Waterman score: 1861; 100.0% identity (100.0% similar) in 270 aa overlap (1-270:1-270)

               10        20        30        40        50        60
pF1KB6 MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 LVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTM
              190       200       210       220       230       240

              250       260       270
pF1KB6 DDIRRMEEETKRQLDEMRQKDPVKGMTADD
       ::::::::::::::::::::::::::::::
NP_006 DDIRRMEEETKRQLDEMRQKDPVKGMTADD
              250       260       270

>>NP_036531 (OMIM: 606876) phosphatidylinositol transfer  (271 aa)
 initn: 1561 init1: 1535 opt: 1535  Z-score: 1893.5  bits: 358.1 E(85289): 9.9e-99
Smith-Waterman score: 1535; 77.8% identity (93.0% similar) in 270 aa overlap (1-270:1-270)

               10        20        30        40        50        60
pF1KB6 MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHK
       :::.::.::.:: ::.:::::::::::::::::::::::.::: ::::::::::::::::
NP_036 MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLG
       ::::.::::.::::.::::.: .:::::::::::::..::::::.::.::::::::::::
NP_036 IYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQE
       : :::: :.:..:: :: :.:::::::::   ::::.:::: :.:.:: :::::::::.:
NP_036 TLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 LVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTM
       :.:. ::: ::::::::.::::::::.::::::.:::.:.:::::::::::.:::.::::
NP_036 LANSPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTM
              190       200       210       220       230       240

              250       260       270 
pF1KB6 DDIRRMEEETKRQLDEMRQKDPVKGMTADD 
       .::::::.::...:. ::..  :.: .: : 
NP_036 EDIRRMEDETQKELETMRKRGSVRGTSAADV
              250       260       270 

>>NP_001271206 (OMIM: 606876) phosphatidylinositol trans  (272 aa)
 initn: 1548 init1: 1522 opt: 1522  Z-score: 1877.5  bits: 355.1 E(85289): 7.7e-98
Smith-Waterman score: 1522; 77.6% identity (93.3% similar) in 268 aa overlap (1-268:1-268)

               10        20        30        40        50        60
pF1KB6 MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHK
       :::.::.::.:: ::.:::::::::::::::::::::::.::: ::::::::::::::::
NP_001 MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLG
       ::::.::::.::::.::::.: .:::::::::::::..::::::.::.::::::::::::
NP_001 IYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQE
       : :::: :.:..:: :: :.:::::::::   ::::.:::: :.:.:: :::::::::.:
NP_001 TLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 LVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTM
       :.:. ::: ::::::::.::::::::.::::::.:::.:.:::::::::::.:::.::::
NP_001 LANSPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTM
              190       200       210       220       230       240

              250       260       270  
pF1KB6 DDIRRMEEETKRQLDEMRQKDPVKGMTADD  
       .::::::.::...:. .:..  :.: .:    
NP_001 EDIRRMEDETQKELETLRNQGQVRGTSAASDE
              250       260       270  

>>NP_001271207 (OMIM: 606876) phosphatidylinositol trans  (273 aa)
 initn: 1526 init1: 1500 opt: 1508  Z-score: 1860.2  bits: 352.0 E(85289): 7.1e-97
Smith-Waterman score: 1508; 76.6% identity (92.6% similar) in 269 aa overlap (2-270:4-272)

                 10        20        30        40        50        
pF1KB6   MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYT
          .:... ::.:: ::.:::::::::::::::::::::::.::: ::::::::::::::
NP_001 MGDLLMEKCRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB6 HKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPD
       ::::::.::::.::::.::::.: .:::::::::::::..::::::.::.::::::::::
NP_001 HKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPD
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB6 LGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWK
       ::: :::: :.:..:: :: :.:::::::::   ::::.:::: :.:.:: :::::::::
NP_001 LGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWK
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KB6 QELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDL
       .::.:. ::: ::::::::.::::::::.::::::.:::.:.:::::::::::.:::.::
NP_001 KELANSPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDL
              190       200       210       220       230       240

      240       250       260       270 
pF1KB6 TMDDIRRMEEETKRQLDEMRQKDPVKGMTADD 
       ::.::::::.::...:. ::..  :.: .: : 
NP_001 TMEDIRRMEDETQKELETMRKRGSVRGTSAADV
              250       260       270   

>>XP_011528354 (OMIM: 606876) PREDICTED: phosphatidylino  (274 aa)
 initn: 1513 init1: 1487 opt: 1495  Z-score: 1844.2  bits: 349.0 E(85289): 5.5e-96
Smith-Waterman score: 1495; 76.4% identity (92.9% similar) in 267 aa overlap (2-268:4-270)

                 10        20        30        40        50        
pF1KB6   MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYT
          .:... ::.:: ::.:::::::::::::::::::::::.::: ::::::::::::::
XP_011 MGDLLMEKCRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB6 HKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPD
       ::::::.::::.::::.::::.: .:::::::::::::..::::::.::.::::::::::
XP_011 HKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPD
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB6 LGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWK
       ::: :::: :.:..:: :: :.:::::::::   ::::.:::: :.:.:: :::::::::
XP_011 LGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWK
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KB6 QELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDL
       .::.:. ::: ::::::::.::::::::.::::::.:::.:.:::::::::::.:::.::
XP_011 KELANSPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDL
              190       200       210       220       230       240

      240       250       260       270  
pF1KB6 TMDDIRRMEEETKRQLDEMRQKDPVKGMTADD  
       ::.::::::.::...:. .:..  :.: .:    
XP_011 TMEDIRRMEDETQKELETLRNQGQVRGTSAASDE
              250       260       270    

>>XP_011522242 (OMIM: 600174) PREDICTED: phosphatidylino  (197 aa)
 initn: 1390 init1: 1390 opt: 1390  Z-score: 1717.1  bits: 325.0 E(85289): 6.7e-89
Smith-Waterman score: 1390; 100.0% identity (100.0% similar) in 197 aa overlap (74-270:1-197)

            50        60        70        80        90       100   
pF1KB6 VNEPYEKDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYM
                                     ::::::::::::::::::::::::::::::
XP_011                               MLAPEGALNIHEKAWNAYPYCRTVITNEYM
                                             10        20        30

           110       120       130       140       150       160   
pF1KB6 KEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKF
               40        50        60        70        80        90

           170       180       190       200       210       220   
pF1KB6 KSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTN
              100       110       120       130       140       150

           230       240       250       260       270
pF1KB6 FHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDEMRQKDPVKGMTADD
       :::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDEMRQKDPVKGMTADD
              160       170       180       190       

>>XP_011522241 (OMIM: 600174) PREDICTED: phosphatidylino  (245 aa)
 initn: 1672 init1: 1032 opt: 1037  Z-score: 1281.4  bits: 244.7 E(85289): 1.2e-64
Smith-Waterman score: 1626; 90.7% identity (90.7% similar) in 270 aa overlap (1-270:1-245)

               10        20        30        40        50        60
pF1KB6 MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLG
       :::::::::::::::::::::::::::::::::::::::                     
XP_011 IYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVIT---------------------
               70        80        90                              

              130       140       150       160       170       180
pF1KB6 TQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQE
           ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ----VHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQE
         100       110       120       130       140       150     

              190       200       210       220       230       240
pF1KB6 LVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTM
         160       170       180       190       200       210     

              250       260       270
pF1KB6 DDIRRMEEETKRQLDEMRQKDPVKGMTADD
       ::::::::::::::::::::::::::::::
XP_011 DDIRRMEEETKRQLDEMRQKDPVKGMTADD
         220       230       240     

>>XP_016884196 (OMIM: 606876) PREDICTED: phosphatidylino  (206 aa)
 initn: 857 init1: 841 opt: 841  Z-score: 1041.3  bits: 200.0 E(85289): 2.9e-51
Smith-Waterman score: 841; 81.1% identity (94.6% similar) in 148 aa overlap (2-149:4-151)

                 10        20        30        40        50        
pF1KB6   MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYT
          .:... ::.:: ::.:::::::::::::::::::::::.::: ::::::::::::::
XP_016 MGDLLMEKCRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB6 HKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPD
       ::::::.::::.::::.::::.: .:::::::::::::..::::::.::.::::::::::
XP_016 HKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPD
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB6 LGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWK
       ::: :::: :.:..:: :: :.:::::::::                             
XP_016 LGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPAAKMGSVYRHECWWKEQSKGRLHKNRG
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KB6 QELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDL
                                                                   
XP_016 GPGSHHLHLSTDFREERRHWMHDSST                                  
              190       200                                        

>>NP_001124320 (OMIM: 608794) membrane-associated phosph  (1243 aa)
 initn: 458 init1: 193 opt: 805  Z-score: 985.9  bits: 192.4 E(85289): 3.5e-48
Smith-Waterman score: 805; 47.3% identity (72.5% similar) in 262 aa overlap (2-260:1-258)

               10        20        30         40         50        
pF1KB6 MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGG-GEGVEVLVNEPY-EKDGEKGQYT
        .:.:::...::.:.:::::.::: . . :..:..: : :::.:.:.:: .  : .::::
NP_001  MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGPGGSGQYT
                10        20        30        40        50         

       60        70        80        90       100       110        
pF1KB6 HKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPD
       ::.::. :..: . : : :..::...:..:::::: ::  :  .. : : :.:::.. ::
NP_001 HKVYHVGSHIPGWFRALLPKAALQVEEESWNAYPYTRTRYTCPFV-EKFSIEIETYYLPD
      60        70        80        90       100        110        

      120       130       140       150       160       170        
pF1KB6 LGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWK
        : : :: .:     ..     :::. :. :   .:::::::  ..:.:::::::. .: 
NP_001 GGQQPNVFNLSGAERRQRILDTIDIV-RDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWA
      120       130       140        150       160       170       

      180       190       200       210        220       230       
pF1KB6 QELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHK-QERRLFTNFHRQLFCWLDKWVD
       .  .  .  : ::::::  :.:..::.: :.:.:::    ::..   ::: .:: :.:..
NP_001 R--TAAQTGPLMCAYKLCKVEFRYWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWTE
         180       190       200       210       220       230     

       240       250       260       270                           
pF1KB6 LTMDDIRRMEEETKRQLDEMRQKDPVKGMTADD                           
       :.: ::: .:::: :.: .   :                                     
NP_001 LSMADIRALEEETARMLAQRMAKCNTGSEGSEAQPPGKPSTEARSAASNTGTPDGPEAPP
         240       250       260       270       280       290     

>>XP_011543698 (OMIM: 608794) PREDICTED: membrane-associ  (1243 aa)
 initn: 458 init1: 193 opt: 805  Z-score: 985.9  bits: 192.4 E(85289): 3.5e-48
Smith-Waterman score: 805; 47.3% identity (72.5% similar) in 262 aa overlap (2-260:1-258)

               10        20        30         40         50        
pF1KB6 MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGG-GEGVEVLVNEPY-EKDGEKGQYT
        .:.:::...::.:.:::::.::: . . :..:..: : :::.:.:.:: .  : .::::
XP_011  MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGPGGSGQYT
                10        20        30        40        50         

       60        70        80        90       100       110        
pF1KB6 HKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPD
       ::.::. :..: . : : :..::...:..:::::: ::  :  .. : : :.:::.. ::
XP_011 HKVYHVGSHIPGWFRALLPKAALQVEEESWNAYPYTRTRYTCPFV-EKFSIEIETYYLPD
      60        70        80        90       100        110        

      120       130       140       150       160       170        
pF1KB6 LGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWK
        : : :: .:     ..     :::. :. :   .:::::::  ..:.:::::::. .: 
XP_011 GGQQPNVFNLSGAERRQRILDTIDIV-RDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWA
      120       130       140        150       160       170       

      180       190       200       210        220       230       
pF1KB6 QELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHK-QERRLFTNFHRQLFCWLDKWVD
       .  .  .  : ::::::  :.:..::.: :.:.:::    ::..   ::: .:: :.:..
XP_011 R--TAAQTGPLMCAYKLCKVEFRYWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWTE
         180       190       200       210       220       230     

       240       250       260       270                           
pF1KB6 LTMDDIRRMEEETKRQLDEMRQKDPVKGMTADD                           
       :.: ::: .:::: :.: .   :                                     
XP_011 LSMADIRALEEETARMLAQRMAKCNTGSEGSEAQPPGKPSTEARSAASNTGTPDGPEAPP
         240       250       260       270       280       290     




270 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 20:41:39 2016 done: Fri Nov  4 20:41:40 2016
 Total Scan time:  6.730 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com