Result of FASTA (omim) for
pFN21AB7807
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7807, 525 aa
1>>>pF1KB7807 525 - 525 aa - 525 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.4892+/-0.000317; mu= 0.9056+/- 0.020
mean_var=247.9733+/-51.333, 0's: 0 Z-trim(123.8): 24 B-trim: 183 in 1/58
Lambda= 0.081446
statistics sampled from 44310 (44335) to 44310 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.52), width: 16
Scan time: 8.720
The best scores are: opt bits E(85289)
NP_005958 (OMIM: 602381) NGFI-A-binding protein 2 ( 525) 3546 429.4 1.3e-119
NP_001317234 (OMIM: 602381) NGFI-A-binding protein ( 461) 2865 349.4 1.4e-95
NP_001308244 (OMIM: 600800) NGFI-A-binding protein ( 457) 617 85.2 4.6e-16
XP_016859664 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 457) 617 85.2 4.6e-16
XP_005246644 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 457) 617 85.2 4.6e-16
XP_005246643 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 617 85.2 4.8e-16
XP_016859662 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 617 85.2 4.8e-16
XP_016859660 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 617 85.2 4.8e-16
XP_016859663 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 617 85.2 4.8e-16
NP_001308243 (OMIM: 600800) NGFI-A-binding protein ( 486) 617 85.2 4.8e-16
XP_016859661 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 617 85.2 4.8e-16
XP_016859665 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 617 85.2 4.8e-16
XP_005246640 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 617 85.2 4.8e-16
XP_016859659 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 617 85.2 4.8e-16
NP_005957 (OMIM: 600800) NGFI-A-binding protein 1 ( 487) 617 85.2 4.8e-16
XP_005246639 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 617 85.2 4.8e-16
NP_001308242 (OMIM: 600800) NGFI-A-binding protein ( 487) 617 85.2 4.8e-16
NP_001308241 (OMIM: 600800) NGFI-A-binding protein ( 487) 617 85.2 4.8e-16
XP_011509521 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 617 85.2 4.8e-16
>>NP_005958 (OMIM: 602381) NGFI-A-binding protein 2 isof (525 aa)
initn: 3546 init1: 3546 opt: 3546 Z-score: 2268.6 bits: 429.4 E(85289): 1.3e-119
Smith-Waterman score: 3546; 100.0% identity (100.0% similar) in 525 aa overlap (1-525:1-525)
10 20 30 40 50 60
pF1KB7 MHRAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MHRAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 MVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRKYSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRKYSI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 IYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 KGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 DGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVSHDRVGRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVSHDRVGRLSP
430 440 450 460 470 480
490 500 510 520
pF1KB7 CVPAKPPLAEFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ
:::::::::::::::::::::::::::::::::::::::::::::
NP_005 CVPAKPPLAEFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ
490 500 510 520
>>NP_001317234 (OMIM: 602381) NGFI-A-binding protein 2 i (461 aa)
initn: 2849 init1: 2849 opt: 2865 Z-score: 1836.9 bits: 349.4 E(85289): 1.4e-95
Smith-Waterman score: 2956; 87.8% identity (87.8% similar) in 525 aa overlap (1-525:1-461)
10 20 30 40 50 60
pF1KB7 MHRAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHRAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVSSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSPLELGEKLSPLPGGPGAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTGGGPDRLEPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 MVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRKYSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQKEEEIRKYSI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 IYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 KGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSGESL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 DGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVSHDRVGRLSP
:::::
NP_001 DGHLQ-------------------------------------------------------
490 500 510 520
pF1KB7 CVPAKPPLAEFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ
::::::::::::::::::::::::::::::::::::
NP_001 ---------EFEEGLLDRCPAPGPHPALVEGRRSSVKVEAEASRQ
430 440 450 460
>>NP_001308244 (OMIM: 600800) NGFI-A-binding protein 1 i (457 aa)
initn: 1094 init1: 576 opt: 617 Z-score: 409.4 bits: 85.2 E(85289): 4.6e-16
Smith-Waterman score: 1069; 51.4% identity (71.4% similar) in 364 aa overlap (33-385:2-339)
10 20 30 40 50 60
pF1KB7 RAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFI
: :::::::::::::.::.::::::...::
NP_001 MAAALPRTLGELQLYRILQKANLLSYFDAFI
10 20 30
70 80 90 100 110 120
pF1KB7 QQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPV
::::::::::::::::::::::::::::.:::::::::::::.:.::::::.::. ..::
NP_001 QQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPV
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 SSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSP--------LELGEKLSPLP
::::..:. : . : : ... :....:: : : ::. : .
NP_001 SSIPIYKLPEGSPTWLGISCSSY----ERSSNAREPHLKIPKCAATTCVQSLGQGKSDVV
100 110 120 130 140
180 190 200 210 220 230
pF1KB7 GG---PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG
:. ..:. :.: :. . ::. . . . ::: :: :.. : ::. .
NP_001 GSLALQSVGESRLWQGHHATESE-HSLSPADLGSPA-SPK------ESSEALDAAAALS-
150 160 170 180 190
240 250 260 270 280 290
pF1KB7 GGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQK
:.: :::. ..:..: .:: ::: :::::. .::::::.:.: .:
NP_001 -------------VAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHK
200 210 220 230 240
300 310 320 330 340 350
pF1KB7 EEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVA
:::::::: :::::::::..::.:.:::::.::::::.:..::.:: :: :::.:.::..
NP_001 EEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQIS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 RESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEED
:: :: . . .. . : :..: : :.
NP_001 REVTYKYTYRTTKSKCGERDELSPKRIKVEQPEKVMAKQMEFLCNQAGYERLQHAERRLS
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 SASLSGESLDGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVS
NP_001 AGLYRQSSEEHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKS
370 380 390 400 410 420
>>XP_016859664 (OMIM: 600800) PREDICTED: NGFI-A-binding (457 aa)
initn: 1094 init1: 576 opt: 617 Z-score: 409.4 bits: 85.2 E(85289): 4.6e-16
Smith-Waterman score: 1069; 51.4% identity (71.4% similar) in 364 aa overlap (33-385:2-339)
10 20 30 40 50 60
pF1KB7 RAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFI
: :::::::::::::.::.::::::...::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFI
10 20 30
70 80 90 100 110 120
pF1KB7 QQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPV
::::::::::::::::::::::::::::.:::::::::::::.:.::::::.::. ..::
XP_016 QQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPV
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 SSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSP--------LELGEKLSPLP
::::..:. : . : : ... :....:: : : ::. : .
XP_016 SSIPIYKLPEGSPTWLGISCSSY----ERSSNAREPHLKIPKCAATTCVQSLGQGKSDVV
100 110 120 130 140
180 190 200 210 220 230
pF1KB7 GG---PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG
:. ..:. :.: :. . ::. . . . ::: :: :.. : ::. .
XP_016 GSLALQSVGESRLWQGHHATESE-HSLSPADLGSPA-SPK------ESSEALDAAAALS-
150 160 170 180 190
240 250 260 270 280 290
pF1KB7 GGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQK
:.: :::. ..:..: .:: ::: :::::. .::::::.:.: .:
XP_016 -------------VAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHK
200 210 220 230 240
300 310 320 330 340 350
pF1KB7 EEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVA
:::::::: :::::::::..::.:.:::::.::::::.:..::.:: :: :::.:.::..
XP_016 EEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQIS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 RESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEED
:: :: . . .. . : :..: : :.
XP_016 REVTYKYTYRTTKSKCGERDELSPKRIKVEQPEKVMAKQMEFLCNQAGYERLQHAERRLS
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 SASLSGESLDGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVS
XP_016 AGLYRQSSEEHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKS
370 380 390 400 410 420
>>XP_005246644 (OMIM: 600800) PREDICTED: NGFI-A-binding (457 aa)
initn: 1094 init1: 576 opt: 617 Z-score: 409.4 bits: 85.2 E(85289): 4.6e-16
Smith-Waterman score: 1069; 51.4% identity (71.4% similar) in 364 aa overlap (33-385:2-339)
10 20 30 40 50 60
pF1KB7 RAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFI
: :::::::::::::.::.::::::...::
XP_005 MAAALPRTLGELQLYRILQKANLLSYFDAFI
10 20 30
70 80 90 100 110 120
pF1KB7 QQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPV
::::::::::::::::::::::::::::.:::::::::::::.:.::::::.::. ..::
XP_005 QQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPV
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 SSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSP--------LELGEKLSPLP
::::..:. : . : : ... :....:: : : ::. : .
XP_005 SSIPIYKLPEGSPTWLGISCSSY----ERSSNAREPHLKIPKCAATTCVQSLGQGKSDVV
100 110 120 130 140
180 190 200 210 220 230
pF1KB7 GG---PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG
:. ..:. :.: :. . ::. . . . ::: :: :.. : ::. .
XP_005 GSLALQSVGESRLWQGHHATESE-HSLSPADLGSPA-SPK------ESSEALDAAAALS-
150 160 170 180 190
240 250 260 270 280 290
pF1KB7 GGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQK
:.: :::. ..:..: .:: ::: :::::. .::::::.:.: .:
XP_005 -------------VAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHK
200 210 220 230 240
300 310 320 330 340 350
pF1KB7 EEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVA
:::::::: :::::::::..::.:.:::::.::::::.:..::.:: :: :::.:.::..
XP_005 EEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQIS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 RESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEED
:: :: . . .. . : :..: : :.
XP_005 REVTYKYTYRTTKSKCGERDELSPKRIKVEQPEKVMAKQMEFLCNQAGYERLQHAERRLS
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 SASLSGESLDGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVS
XP_005 AGLYRQSSEEHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKS
370 380 390 400 410 420
>>XP_005246643 (OMIM: 600800) PREDICTED: NGFI-A-binding (486 aa)
initn: 1089 init1: 576 opt: 617 Z-score: 409.1 bits: 85.2 E(85289): 4.8e-16
Smith-Waterman score: 1072; 51.1% identity (71.1% similar) in 370 aa overlap (33-391:2-342)
10 20 30 40 50 60
pF1KB7 RAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFI
: :::::::::::::.::.::::::...::
XP_005 MAAALPRTLGELQLYRILQKANLLSYFDAFI
10 20 30
70 80 90 100 110 120
pF1KB7 QQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPV
::::::::::::::::::::::::::::.:::::::::::::.:.::::::.::. ..::
XP_005 QQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPV
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 SSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSP--------LELGEKLSPLP
::::..:. : . : : ... :....:: : : ::. : .
XP_005 SSIPIYKLPEGSPTWLGISCSSY----ERSSNAREPHLKIPKCAATTCVQSLGQGKSDVV
100 110 120 130 140
180 190 200 210 220 230
pF1KB7 GG---PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG
:. ..:. :.: :. . ::. . . . ::: :: :.. : ::. .
XP_005 GSLALQSVGESRLWQGHHATESE-HSLSPADLGSPA-SPK------ESSEALDAAAALS-
150 160 170 180 190
240 250 260 270 280 290
pF1KB7 GGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQK
:.: :::. ..:..: .:: ::: :::::. .::::::.:.: .:
XP_005 -------------VAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHK
200 210 220 230 240
300 310 320 330 340 350
pF1KB7 EEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVA
:::::::: :::::::::..::.:.:::::.::::::.:..::.:: :: :::.:.::..
XP_005 EEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQIS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 RESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEED
:: :: . . .. . : :..: : : :..:
XP_005 REVTYKYTYRTTKSKCGERDELSPKRIKVEDG---FPDFQDSVQTLFQQARAKSEELAAL
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 SASLSGESLDGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVS
XP_005 SSQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQGERP
370 380 390 400 410 420
>>XP_016859662 (OMIM: 600800) PREDICTED: NGFI-A-binding (486 aa)
initn: 1089 init1: 576 opt: 617 Z-score: 409.1 bits: 85.2 E(85289): 4.8e-16
Smith-Waterman score: 1072; 51.1% identity (71.1% similar) in 370 aa overlap (33-391:2-342)
10 20 30 40 50 60
pF1KB7 RAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFI
: :::::::::::::.::.::::::...::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFI
10 20 30
70 80 90 100 110 120
pF1KB7 QQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPV
::::::::::::::::::::::::::::.:::::::::::::.:.::::::.::. ..::
XP_016 QQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPV
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 SSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSP--------LELGEKLSPLP
::::..:. : . : : ... :....:: : : ::. : .
XP_016 SSIPIYKLPEGSPTWLGISCSSY----ERSSNAREPHLKIPKCAATTCVQSLGQGKSDVV
100 110 120 130 140
180 190 200 210 220 230
pF1KB7 GG---PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG
:. ..:. :.: :. . ::. . . . ::: :: :.. : ::. .
XP_016 GSLALQSVGESRLWQGHHATESE-HSLSPADLGSPA-SPK------ESSEALDAAAALS-
150 160 170 180 190
240 250 260 270 280 290
pF1KB7 GGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQK
:.: :::. ..:..: .:: ::: :::::. .::::::.:.: .:
XP_016 -------------VAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHK
200 210 220 230 240
300 310 320 330 340 350
pF1KB7 EEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVA
:::::::: :::::::::..::.:.:::::.::::::.:..::.:: :: :::.:.::..
XP_016 EEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQIS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 RESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEED
:: :: . . .. . : :..: : : :..:
XP_016 REVTYKYTYRTTKSKCGERDELSPKRIKVEDG---FPDFQDSVQTLFQQARAKSEELAAL
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 SASLSGESLDGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVS
XP_016 SSQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQGERP
370 380 390 400 410 420
>>XP_016859660 (OMIM: 600800) PREDICTED: NGFI-A-binding (486 aa)
initn: 1089 init1: 576 opt: 617 Z-score: 409.1 bits: 85.2 E(85289): 4.8e-16
Smith-Waterman score: 1072; 51.1% identity (71.1% similar) in 370 aa overlap (33-391:2-342)
10 20 30 40 50 60
pF1KB7 RAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFI
: :::::::::::::.::.::::::...::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFI
10 20 30
70 80 90 100 110 120
pF1KB7 QQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPV
::::::::::::::::::::::::::::.:::::::::::::.:.::::::.::. ..::
XP_016 QQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPV
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 SSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSP--------LELGEKLSPLP
::::..:. : . : : ... :....:: : : ::. : .
XP_016 SSIPIYKLPEGSPTWLGISCSSY----ERSSNAREPHLKIPKCAATTCVQSLGQGKSDVV
100 110 120 130 140
180 190 200 210 220 230
pF1KB7 GG---PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG
:. ..:. :.: :. . ::. . . . ::: :: :.. : ::. .
XP_016 GSLALQSVGESRLWQGHHATESE-HSLSPADLGSPA-SPK------ESSEALDAAAALS-
150 160 170 180 190
240 250 260 270 280 290
pF1KB7 GGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQK
:.: :::. ..:..: .:: ::: :::::. .::::::.:.: .:
XP_016 -------------VAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHK
200 210 220 230 240
300 310 320 330 340 350
pF1KB7 EEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVA
:::::::: :::::::::..::.:.:::::.::::::.:..::.:: :: :::.:.::..
XP_016 EEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQIS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 RESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEED
:: :: . . .. . : :..: : : :..:
XP_016 REVTYKYTYRTTKSKCGERDELSPKRIKVEDG---FPDFQDSVQTLFQQARAKSEELAAL
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 SASLSGESLDGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVS
XP_016 SSQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQGERP
370 380 390 400 410 420
>>XP_016859663 (OMIM: 600800) PREDICTED: NGFI-A-binding (486 aa)
initn: 1089 init1: 576 opt: 617 Z-score: 409.1 bits: 85.2 E(85289): 4.8e-16
Smith-Waterman score: 1072; 51.1% identity (71.1% similar) in 370 aa overlap (33-391:2-342)
10 20 30 40 50 60
pF1KB7 RAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFI
: :::::::::::::.::.::::::...::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFI
10 20 30
70 80 90 100 110 120
pF1KB7 QQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPV
::::::::::::::::::::::::::::.:::::::::::::.:.::::::.::. ..::
XP_016 QQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPV
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 SSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSP--------LELGEKLSPLP
::::..:. : . : : ... :....:: : : ::. : .
XP_016 SSIPIYKLPEGSPTWLGISCSSY----ERSSNAREPHLKIPKCAATTCVQSLGQGKSDVV
100 110 120 130 140
180 190 200 210 220 230
pF1KB7 GG---PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG
:. ..:. :.: :. . ::. . . . ::: :: :.. : ::. .
XP_016 GSLALQSVGESRLWQGHHATESE-HSLSPADLGSPA-SPK------ESSEALDAAAALS-
150 160 170 180 190
240 250 260 270 280 290
pF1KB7 GGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQK
:.: :::. ..:..: .:: ::: :::::. .::::::.:.: .:
XP_016 -------------VAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHK
200 210 220 230 240
300 310 320 330 340 350
pF1KB7 EEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVA
:::::::: :::::::::..::.:.:::::.::::::.:..::.:: :: :::.:.::..
XP_016 EEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQIS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 RESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEED
:: :: . . .. . : :..: : : :..:
XP_016 REVTYKYTYRTTKSKCGERDELSPKRIKVEDG---FPDFQDSVQTLFQQARAKSEELAAL
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 SASLSGESLDGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVS
XP_016 SSQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQGERP
370 380 390 400 410 420
>>NP_001308243 (OMIM: 600800) NGFI-A-binding protein 1 i (486 aa)
initn: 1089 init1: 576 opt: 617 Z-score: 409.1 bits: 85.2 E(85289): 4.8e-16
Smith-Waterman score: 1072; 51.1% identity (71.1% similar) in 370 aa overlap (33-391:2-342)
10 20 30 40 50 60
pF1KB7 RAPSPTAEQPPGGGDSARRTLQPRLKPSARAMALPRTLGELQLYRVLQRANLLSYYETFI
: :::::::::::::.::.::::::...::
NP_001 MAAALPRTLGELQLYRILQKANLLSYFDAFI
10 20 30
70 80 90 100 110 120
pF1KB7 QQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWATNPGLFSQPVPAVPV
::::::::::::::::::::::::::::.:::::::::::::.:.::::::.::. ..::
NP_001 QQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPV
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 SSIPLFKISETAGTRKGSMSNGHGSPGEKAGSARSFSPKSP--------LELGEKLSPLP
::::..:. : . : : ... :....:: : : ::. : .
NP_001 SSIPIYKLPEGSPTWLGISCSSY----ERSSNAREPHLKIPKCAATTCVQSLGQGKSDVV
100 110 120 130 140
180 190 200 210 220 230
pF1KB7 GG---PGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAGGLAAGGTG
:. ..:. :.: :. . ::. . . . ::: :: :.. : ::. .
NP_001 GSLALQSVGESRLWQGHHATESE-HSLSPADLGSPA-SPK------ESSEALDAAAALS-
150 160 170 180 190
240 250 260 270 280 290
pF1KB7 GGPDRLEPEMVRMVVESVERIFRSFPRGDAGEVTSLLKLNKKLARSVGHIFEMDDNDSQK
:.: :::. ..:..: .:: ::: :::::. .::::::.:.: .:
NP_001 -------------VAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHK
200 210 220 230 240
300 310 320 330 340 350
pF1KB7 EEEIRKYSIIYGRFDSKRREGKQLSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVA
:::::::: :::::::::..::.:.:::::.::::::.:..::.:: :: :::.:.::..
NP_001 EEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQIS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 RESTYLSSLKGSRLHPEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEED
:: :: . . .. . : :..: : : :..:
NP_001 REVTYKYTYRTTKSKCGERDELSPKRIKVEDG---FPDFQDSVQTLFQQARAKSEELAAL
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 SASLSGESLDGHLQAVGSCPRLTPPPADLPLALPAHGLWSRHILQQTLMDEGLRLARLVS
NP_001 SSQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQGERP
370 380 390 400 410 420
525 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:24:28 2016 done: Fri Nov 4 22:24:29 2016
Total Scan time: 8.720 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]