Result of FASTA (ccds) for
pFN21AB3719
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3719, 866 aa
1>>>pF1KB3719 866 - 866 aa - 866 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2095+/-0.000745; mu= 12.8660+/- 0.045
mean_var=128.5005+/-25.676, 0's: 0 Z-trim(112.7): 15 B-trim: 0 in 0/51
Lambda= 0.113141
statistics sampled from 13429 (13443) to 13429 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.413), width: 16
Scan time: 4.400
The best scores are: opt bits E(32554)
CCDS13739.1 IL17RA gene_id:23765|Hs108|chr22 ( 866) 6026 995.2 0
CCDS77645.1 IL17RA gene_id:23765|Hs108|chr22 ( 832) 3564 593.3 5.9e-169
CCDS82790.1 IL17RD gene_id:54756|Hs108|chr3 ( 595) 394 75.8 2.6e-13
CCDS2880.2 IL17RD gene_id:54756|Hs108|chr3 ( 739) 394 75.8 3.1e-13
>>CCDS13739.1 IL17RA gene_id:23765|Hs108|chr22 (866 aa)
initn: 6026 init1: 6026 opt: 6026 Z-score: 5318.4 bits: 995.2 E(32554): 0
Smith-Waterman score: 6026; 100.0% identity (100.0% similar) in 866 aa overlap (1-866:1-866)
10 20 30 40 50 60
pF1KB3 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB3 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
790 800 810 820 830 840
850 860
pF1KB3 RQLLFRQLQKNSGWDTMGSESEGPSA
::::::::::::::::::::::::::
CCDS13 RQLLFRQLQKNSGWDTMGSESEGPSA
850 860
>>CCDS77645.1 IL17RA gene_id:23765|Hs108|chr22 (832 aa)
initn: 3564 init1: 3564 opt: 3564 Z-score: 3146.8 bits: 593.3 E(32554): 5.9e-169
Smith-Waterman score: 5711; 96.1% identity (96.1% similar) in 866 aa overlap (1-866:1-832)
10 20 30 40 50 60
pF1KB3 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK
:::::::::::::: ::::::::::::
CCDS77 VSCPEMPDTPEPIP----------------------------------GPGSEKYSDDTK
310 320
370 380 390 400 410 420
pF1KB3 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB3 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB3 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
450 460 470 480 490 500
550 560 570 580 590 600
pF1KB3 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
510 520 530 540 550 560
610 620 630 640 650 660
pF1KB3 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
570 580 590 600 610 620
670 680 690 700 710 720
pF1KB3 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
630 640 650 660 670 680
730 740 750 760 770 780
pF1KB3 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
690 700 710 720 730 740
790 800 810 820 830 840
pF1KB3 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
750 760 770 780 790 800
850 860
pF1KB3 RQLLFRQLQKNSGWDTMGSESEGPSA
::::::::::::::::::::::::::
CCDS77 RQLLFRQLQKNSGWDTMGSESEGPSA
810 820 830
>>CCDS82790.1 IL17RD gene_id:54756|Hs108|chr3 (595 aa)
initn: 305 init1: 145 opt: 394 Z-score: 352.5 bits: 75.8 E(32554): 2.6e-13
Smith-Waterman score: 401; 25.8% identity (51.2% similar) in 570 aa overlap (225-768:62-582)
200 210 220 230 240 250
pF1KB3 PCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHMENHSCFEHMH-HIP
: : : . . .:: : .. :. .. :
CCDS82 HPFFFRTRACDLLLQPDNLACKPFWKPRNLNISQHGSDMQVSFDHAPHNFGFRFFYLHYK
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB3 APRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSATVSCPEMPDTPEPI
. :.... . .: ..:. .. ..: ..: . .. :
CCDS82 LKHEGPFKRKTCKQEQTTETTSCLLQNVSPGDYIIELVDDT---NTTRKVMHYALKPVHS
100 110 120 130 140
320 330 340 350 360 370
pF1KB3 PDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGS---EKYSDDTKYTDGLPAADL
: :. . . . . .. . .... ..: . . : :. :... :: .:: :
CCDS82 PWAGPIRAVAITVPLVVISAFATLFTVMCRKKQQENIYSHLDEESSESSTYTAALPRERL
150 160 170 180 190 200
380 390 400 410 420
pF1KB3 IPPPLKPRKVWIIYSA-DHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWV
: : ::.. ::. : ...:: :: :: :: :::::: :. .. . : ::
CCDS82 RPRP----KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWV
210 220 230 240 250 260
430 440 450 460 470 480
pF1KB3 GRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFTAAMNMILPD
:.. ::. :::.::.: . .. . . .:. :.:: .:.. :
CCDS82 ---IQKIHESQF-IIVVCSKGMKY----FVDKKNYKHKGGGRGSGKGELFLVAVSAIAEK
270 280 290 300 310
490 500 510 520 530 540
pF1KB3 FKRP-----ACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEV--YFRIQDLEMF
... : .. ... :: . ::.:::: .. . .: ::: . .. ... .: .
CCDS82 LRQAKQSSSAALSKFIAVYF-DYSCEGDVPGILDLSTKYRLMDNLPQLCSHLHSRDHGLQ
320 330 340 350 360 370
550 560 570 580 590 600
pF1KB3 QPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPSLD
.::. : : : ::.:: .::.: .:. .... . ::::: . . : :
CCDS82 EPGQHTRQG--SRRNYFRSKSGRSLYVAICNMHQFIDEEPDWFEKQFV----PFHPPPLR
380 390 400 410 420
610 620 630 640 650 660
pF1KB3 EEVFEEPLLPP-GTGIVKRAPLVRE-PGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
..::.: .:.: . . : :. :: .. ::: : : :
CCDS82 ---YREPVLEKFDSGLVLNDVMCKPGPESDFCLKVE--------AAV------LGATG-P
430 440 450 460 470
670 680 690 700 710
pF1KB3 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPG-AGRNSVLF-
: . : ...:.: : : ::.:. : .: :::. :.: ..
CCDS82 ADSQ-H----ESQHGGLDQDGEARPALDGSAALQPLLHTVKA----GSPSDMPRDSGIYD
480 490 500 510 520
720 730 740 750 760
pF1KB3 --LPVDPEDSPL--GSSTPMASPDLLPEDVR------EHLEGLMLSLFEQSLSCQAQGGC
.: . . :: : :: .. . : :.: :. . : . .: ::.:. ::
CCDS82 SSVPSSELSLPLMEGLSTDQTETSSLTESVSSSSGLGEEEPPALPSKLLSSGSCKADLGC
530 540 550 560 570 580
770 780 790 800 810 820
pF1KB3 SRPAMVLTDPHTPYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPL
CCDS82 RSYTDELHAVAPL
590
>>CCDS2880.2 IL17RD gene_id:54756|Hs108|chr3 (739 aa)
initn: 305 init1: 145 opt: 394 Z-score: 351.1 bits: 75.8 E(32554): 3.1e-13
Smith-Waterman score: 405; 23.6% identity (50.3% similar) in 755 aa overlap (47-768:52-726)
20 30 40 50 60 70
pF1KB3 GLLLLLLGVLAPGGASLRLLDHRALVCSQPGL-NCTVKNSTCLDDSWIHPRNL-TPSSPK
:: : : : ..: ....: . . .. .
CCDS28 QLAVAAGGSGRARGADTCGWRGVGPASRNSGLYNITFKYDNC--TTYLNPVGKHVIADAQ
30 40 50 60 70
80 90 100 110 120 130
pF1KB3 DLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLNTNERLCVRFEFLSK
.. :. . : : .. : :. .: .:.: .. . .:... : : .. .:.
CCDS28 NITISQYACHDQ-----VAVTILWS-PGALGIEFLKGFRVILEELKSEGRQCQQL-ILKD
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB3 LRHHHRRWRFT--FSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNFLVPDCEHARMKV
.. . .. : :. .. : . :. .: : .. :.. : . :. . .
CCDS28 PKQLNSSFKRTGMESQPFLNMKFETDYFVKVVPFPSIKNESNYHPFFFRTRACD---LLL
140 150 160 170 180
200 210 220 230 240 250
pF1KB3 TTPCMSSGSLWDP-NITVETLEAHQLRVSFTLWNESTHYQILLTSFPHMENHSCFEHMH-
.. .: : :... : : . . .:: : .. :. ..
CCDS28 QPDNLACKPFWKPRNLNI-----------------SQHGSDMQVSFDHAPHNFGFRFFYL
190 200 210 220 230
260 270 280 290 300 310
pF1KB3 HIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSATVSCPEMPDTP
: . :.... . .: ..:. .. ..: ..: . .. :
CCDS28 HYKLKHEGPFKRKTCKQEQTTETTSCLLQNVSPGDYIIELVDDT---NTTRKVMHYALKP
240 250 260 270 280
320 330 340 350 360
pF1KB3 EPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGS---EKYSDDTKYTDGLPA
: :. . . . . .. . .... ..: . . : :. :... :: .::
CCDS28 VHSPWAGPIRAVAITVPLVVISAFATLFTVMCRKKQQENIYSHLDEESSESSTYTAALPR
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB3 ADLIPPPLKPRKVWIIYSA-DHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVM
: : : ::.. ::. : ...:: :: :: :: :::::: :. .. . :
CCDS28 ERLRPRP----KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQR
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB3 TWVGRQKQEMVESNSKIIVLCSRGTR--AKWQALLGRGAPVRLRCDHGKPVGDLFTAAMN
:: :.. ::. :::.::.: . . . .:. .:. :.:: .:..
CCDS28 EWV---IQKIHESQF-IIVVCSKGMKYFVDKKNYKHKGG------GRGSGKGELFLVAVS
410 420 430 440 450
490 500 510 520 530
pF1KB3 MILPDFKRP-----ACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEV--YFRIQ
: ... : .. ... :: . ::.:::: .. . .: ::: . .. ... .
CCDS28 AIAEKLRQAKQSSSAALSKFIAVYF-DYSCEGDVPGILDLSTKYRLMDNLPQLCSHLHSR
460 470 480 490 500 510
540 550 560 570 580 590
pF1KB3 DLEMFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQD
: . .::. : : : ::.:: .::.: .:. .... . ::::: . .
CCDS28 DHGLQEPGQHTRQG--SRRNYFRSKSGRSLYVAICNMHQFIDEEPDWFEKQFV----PFH
520 530 540 550 560
600 610 620 630 640 650
pF1KB3 APSLDEEVFEEPLLPP-GTGIVKRAPLVRE-PGSQACLAIDPLVGEEGGAAVAKLEPHLQ
: : ..::.: .:.: . . : :. :: .. ::: :
CCDS28 PPPLR---YREPVLEKFDSGLVLNDVMCKPGPESDFCLKVE--------AAV------LG
570 580 590 600 610
660 670 680 690 700 710
pF1KB3 PRGQPAPQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPG-AGRN
: :: . : ...:.: : : ::.:. : .: :::. :.
CCDS28 ATG-PADSQ-HE----SQHGGLDQDGEARPALDGSAALQPLLHTVKA----GSPSDMPRD
620 630 640 650 660
720 730 740 750 760
pF1KB3 SVLF---LPVDPEDSPL--GSSTPMASPDLLPEDVR------EHLEGLMLSLFEQSLSCQ
: .. .: . . :: : :: .. . : :.: :. . : . .: ::.
CCDS28 SGIYDSSVPSSELSLPLMEGLSTDQTETSSLTESVSSSSGLGEEEPPALPSKLLSSGSCK
670 680 690 700 710 720
770 780 790 800 810 820
pF1KB3 AQGGCSRPAMVLTDPHTPYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGK
:. ::
CCDS28 ADLGCRSYTDELHAVAPL
730
866 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:38:04 2016 done: Fri Nov 4 23:38:05 2016
Total Scan time: 4.400 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]