FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5127, 118 aa 1>>>pF1KE5127 118 - 118 aa - 118 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3751+/-0.000644; mu= 8.9737+/- 0.039 mean_var=49.4303+/-10.021, 0's: 0 Z-trim(108.7): 11 B-trim: 0 in 0/51 Lambda= 0.182422 statistics sampled from 10383 (10388) to 10383 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.319), width: 16 Scan time: 1.140 The best scores are: opt bits E(32554) CCDS13820.1 DDT gene_id:1652|Hs108|chr22 ( 118) 766 208.7 6.6e-55 CCDS42988.1 DDTL gene_id:100037417|Hs108|chr22 ( 134) 613 168.5 9.9e-43 CCDS13819.1 MIF gene_id:4282|Hs108|chr22 ( 115) 248 72.4 7.1e-14 >>CCDS13820.1 DDT gene_id:1652|Hs108|chr22 (118 aa) initn: 766 init1: 766 opt: 766 Z-score: 1099.2 bits: 208.7 E(32554): 6.6e-55 Smith-Waterman score: 766; 100.0% identity (100.0% similar) in 118 aa overlap (1-118:1-118) 10 20 30 40 50 60 pF1KE5 MPFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MPFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQL 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 SISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRFFPLESWQIGKIGTVMTFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRFFPLESWQIGKIGTVMTFL 70 80 90 100 110 >>CCDS42988.1 DDTL gene_id:100037417|Hs108|chr22 (134 aa) initn: 613 init1: 613 opt: 613 Z-score: 880.6 bits: 168.5 E(32554): 9.9e-43 Smith-Waterman score: 613; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95) 10 20 30 40 50 60 pF1KE5 MPFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MPFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQL 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 SISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRFFPLESWQIGKIGTVMTFL ::::::::::::::::::::::::::::::::::: CCDS42 SISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRFPTVLSTSPAAHGGPRCPGEIIEGK 70 80 90 100 110 120 CCDS42 KSCLNEEALFIYFI 130 >>CCDS13819.1 MIF gene_id:4282|Hs108|chr22 (115 aa) initn: 248 init1: 191 opt: 248 Z-score: 362.6 bits: 72.4 E(32554): 7.1e-14 Smith-Waterman score: 248; 36.7% identity (67.0% similar) in 109 aa overlap (1-109:1-108) 10 20 30 40 50 60 pF1KE5 MPFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQL ::.. ..::.: :: :. ..: :. ::: . . : : : ::..::.:::: CCDS13 MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALC 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 SISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRFFPLESWQIGKIGTVMTFL :. ::: .: :. :::.: . .:...: .. ::. : .. ... ..: CCDS13 SLHSIGKIGGAQ-NRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA 70 80 90 100 110 118 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:38:50 2016 done: Mon Nov 7 21:38:51 2016 Total Scan time: 1.140 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]