FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0189, 221 aa 1>>>pF1KE0189 221 - 221 aa - 221 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7528+/-0.000287; mu= 12.4726+/- 0.018 mean_var=85.5341+/-16.748, 0's: 0 Z-trim(119.6): 10 B-trim: 145 in 2/53 Lambda= 0.138677 statistics sampled from 33822 (33832) to 33822 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.397), width: 16 Scan time: 6.760 The best scores are: opt bits E(85289) XP_016875248 (OMIM: 615027) PREDICTED: protein FAM ( 221) 1538 316.7 1.9e-86 NP_067061 (OMIM: 615027) protein FAM60A [Homo sapi ( 221) 1538 316.7 1.9e-86 XP_016875247 (OMIM: 615027) PREDICTED: protein FAM ( 221) 1538 316.7 1.9e-86 NP_001129283 (OMIM: 615027) protein FAM60A [Homo s ( 221) 1538 316.7 1.9e-86 NP_001129284 (OMIM: 615027) protein FAM60A [Homo s ( 221) 1538 316.7 1.9e-86 XP_016875249 (OMIM: 615027) PREDICTED: protein FAM ( 221) 1538 316.7 1.9e-86 XP_016875250 (OMIM: 615027) PREDICTED: protein FAM ( 221) 1538 316.7 1.9e-86 XP_016875251 (OMIM: 615027) PREDICTED: protein FAM ( 221) 1538 316.7 1.9e-86 XP_011519105 (OMIM: 615027) PREDICTED: protein FAM ( 328) 1538 316.9 2.6e-86 >>XP_016875248 (OMIM: 615027) PREDICTED: protein FAM60A (221 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1673.1 bits: 316.7 E(85289): 1.9e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG 130 140 150 160 170 180 190 200 210 220 pF1KE0 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW ::::::::::::::::::::::::::::::::::::::::: XP_016 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW 190 200 210 220 >>NP_067061 (OMIM: 615027) protein FAM60A [Homo sapiens] (221 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1673.1 bits: 316.7 E(85289): 1.9e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG 130 140 150 160 170 180 190 200 210 220 pF1KE0 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW ::::::::::::::::::::::::::::::::::::::::: NP_067 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW 190 200 210 220 >>XP_016875247 (OMIM: 615027) PREDICTED: protein FAM60A (221 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1673.1 bits: 316.7 E(85289): 1.9e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG 130 140 150 160 170 180 190 200 210 220 pF1KE0 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW ::::::::::::::::::::::::::::::::::::::::: XP_016 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW 190 200 210 220 >>NP_001129283 (OMIM: 615027) protein FAM60A [Homo sapie (221 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1673.1 bits: 316.7 E(85289): 1.9e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG 130 140 150 160 170 180 190 200 210 220 pF1KE0 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW ::::::::::::::::::::::::::::::::::::::::: NP_001 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW 190 200 210 220 >>NP_001129284 (OMIM: 615027) protein FAM60A [Homo sapie (221 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1673.1 bits: 316.7 E(85289): 1.9e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG 130 140 150 160 170 180 190 200 210 220 pF1KE0 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW ::::::::::::::::::::::::::::::::::::::::: NP_001 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW 190 200 210 220 >>XP_016875249 (OMIM: 615027) PREDICTED: protein FAM60A (221 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1673.1 bits: 316.7 E(85289): 1.9e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG 130 140 150 160 170 180 190 200 210 220 pF1KE0 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW ::::::::::::::::::::::::::::::::::::::::: XP_016 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW 190 200 210 220 >>XP_016875250 (OMIM: 615027) PREDICTED: protein FAM60A (221 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1673.1 bits: 316.7 E(85289): 1.9e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG 130 140 150 160 170 180 190 200 210 220 pF1KE0 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW ::::::::::::::::::::::::::::::::::::::::: XP_016 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW 190 200 210 220 >>XP_016875251 (OMIM: 615027) PREDICTED: protein FAM60A (221 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1673.1 bits: 316.7 E(85289): 1.9e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKG 130 140 150 160 170 180 190 200 210 220 pF1KE0 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW ::::::::::::::::::::::::::::::::::::::::: XP_016 RFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW 190 200 210 220 >>XP_011519105 (OMIM: 615027) PREDICTED: protein FAM60A (328 aa) initn: 1538 init1: 1538 opt: 1538 Z-score: 1670.7 bits: 316.9 E(85289): 2.6e-86 Smith-Waterman score: 1538; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:108-328) 10 20 30 pF1KE0 MFGFHKPKMYRSIEGCCICRAKSSSSRFTD :::::::::::::::::::::::::::::: XP_011 LLAGSASLSAVTGVPEGEARFTEDYCPEEKMFGFHKPKMYRSIEGCCICRAKSSSSRFTD 80 90 100 110 120 130 40 50 60 70 80 90 pF1KE0 SKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTL 140 150 160 170 180 190 100 110 120 130 140 150 pF1KE0 KPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMA 200 210 220 230 240 250 160 170 180 190 200 210 pF1KE0 SGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPEEQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPEEQG 260 270 280 290 300 310 220 pF1KE0 PEPLPISTQEW ::::::::::: XP_011 PEPLPISTQEW 320 221 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 14:29:35 2016 done: Mon Nov 7 14:29:36 2016 Total Scan time: 6.760 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]