Result of FASTA (omim) for
pFN21AB7590
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7590, 290 aa
1>>>pF1KB7590 290 - 290 aa - 290 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9124+/-0.000304; mu= 7.6287+/- 0.019
mean_var=229.6820+/-46.426, 0's: 0 Z-trim(124.5): 246 B-trim: 47 in 1/61
Lambda= 0.084627
statistics sampled from 46154 (46451) to 46154 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.828), E-opt: 0.2 (0.545), width: 16
Scan time: 9.390
The best scores are: opt bits E(85289)
NP_036608 (OMIM: 604295) ventral anterior homeobox ( 290) 1940 248.5 1.1e-65
XP_006712045 (OMIM: 604295) PREDICTED: ventral ant ( 150) 984 131.5 9.7e-31
XP_011531052 (OMIM: 604295) PREDICTED: ventral ant ( 150) 984 131.5 9.7e-31
XP_011531053 (OMIM: 604295) PREDICTED: ventral ant ( 150) 984 131.5 9.7e-31
NP_001106175 (OMIM: 604294,614402) ventral anterio ( 334) 739 102.0 1.7e-21
NP_954582 (OMIM: 604294,614402) ventral anterior h ( 186) 488 71.0 1.9e-12
NP_001980 (OMIM: 142996) homeobox even-skipped hom ( 407) 293 47.6 4.7e-05
NP_001291448 (OMIM: 142996) homeobox even-skipped ( 225) 287 46.6 5.3e-05
NP_001291449 (OMIM: 142996) homeobox even-skipped ( 225) 287 46.6 5.3e-05
NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 282 46.0 8.8e-05
NP_001418 (OMIM: 131310) homeobox protein engraile ( 333) 284 46.4 8.9e-05
NP_006875 (OMIM: 602504) short stature homeobox pr ( 331) 280 45.9 0.00012
NP_001157150 (OMIM: 602504) short stature homeobox ( 319) 274 45.2 0.0002
NP_001180 (OMIM: 602183,613330) homeobox protein N ( 333) 271 44.8 0.00027
NP_005211 (OMIM: 104510,190320,600525) homeobox pr ( 287) 269 44.5 0.00029
NP_001317252 (OMIM: 142966) homeobox protein Hox-B ( 299) 269 44.5 0.00029
NP_001417 (OMIM: 131290) homeobox protein engraile ( 392) 271 44.9 0.0003
NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 269 44.6 0.00033
XP_011523028 (OMIM: 142966) PREDICTED: homeobox pr ( 358) 269 44.6 0.00033
NP_001317251 (OMIM: 142966) homeobox protein Hox-B ( 358) 269 44.6 0.00033
XP_011523023 (OMIM: 142966) PREDICTED: homeobox pr ( 430) 269 44.7 0.00037
NP_002137 (OMIM: 142966) homeobox protein Hox-B3 i ( 431) 269 44.7 0.00038
XP_011523021 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 269 44.7 0.00038
XP_006721917 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 269 44.7 0.00038
XP_005257334 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 269 44.7 0.00038
XP_011523012 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 269 44.7 0.00038
XP_011523022 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 269 44.7 0.00038
XP_011523010 (OMIM: 142966) PREDICTED: homeobox pr ( 488) 269 44.8 0.00041
NP_004089 (OMIM: 269160,600035) homeobox protein E ( 252) 263 43.7 0.00044
XP_016880050 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 269 44.8 0.00046
XP_016880048 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 269 44.8 0.00046
XP_016880052 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 269 44.8 0.00046
XP_011523009 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 269 44.8 0.00046
XP_016880047 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 269 44.8 0.00046
XP_016880049 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 269 44.8 0.00046
XP_016880046 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 269 44.8 0.00046
XP_016880051 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 269 44.8 0.00046
NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 263 43.8 0.00052
XP_011530999 (OMIM: 600034) PREDICTED: homeobox pr ( 119) 255 42.4 0.00052
NP_006252 (OMIM: 262600,601538) homeobox protein p ( 226) 259 43.2 0.00057
NP_703149 (OMIM: 300154) homeobox protein ESX1 [Ho ( 406) 261 43.7 0.00071
NP_055283 (OMIM: 607158) homeobox protein VENTX [H ( 258) 256 42.9 0.0008
NP_004088 (OMIM: 600034) homeobox protein EMX1 [Ho ( 290) 255 42.8 0.00094
NP_061975 (OMIM: 142952) homeobox protein Hox-A5 [ ( 270) 252 42.4 0.0012
NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 250 42.1 0.0013
NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 250 42.1 0.0013
NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346) 252 42.5 0.0014
XP_016871562 (OMIM: 607158) PREDICTED: homeobox pr ( 189) 242 41.0 0.0021
XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 42.0 0.0024
XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 247 42.0 0.0024
>>NP_036608 (OMIM: 604295) ventral anterior homeobox 2 [ (290 aa)
initn: 1940 init1: 1940 opt: 1940 Z-score: 1300.2 bits: 248.5 E(85289): 1.1e-65
Smith-Waterman score: 1940; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290)
10 20 30 40 50 60
pF1KB7 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 FQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 NILRLLEQGRLLSVPRAPSLLALTPSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 NILRLLEQGRLLSVPRAPSLLALTPSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPP
190 200 210 220 230 240
250 260 270 280 290
pF1KB7 LPPPLPAVCFSSAPLLDLPAGYELGSSAFEPYSWLERKVGSASSCKKANT
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LPPPLPAVCFSSAPLLDLPAGYELGSSAFEPYSWLERKVGSASSCKKANT
250 260 270 280 290
>>XP_006712045 (OMIM: 604295) PREDICTED: ventral anterio (150 aa)
initn: 984 init1: 984 opt: 984 Z-score: 672.8 bits: 131.5 E(85289): 9.7e-31
Smith-Waterman score: 984; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145)
10 20 30 40 50 60
pF1KB7 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATS
:::::::::::::::::::::::::
XP_006 FQRCQYVVGRERTELARQLNLSETQNQPQS
130 140 150
>>XP_011531052 (OMIM: 604295) PREDICTED: ventral anterio (150 aa)
initn: 984 init1: 984 opt: 984 Z-score: 672.8 bits: 131.5 E(85289): 9.7e-31
Smith-Waterman score: 984; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145)
10 20 30 40 50 60
pF1KB7 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATS
:::::::::::::::::::::::::
XP_011 FQRCQYVVGRERTELARQLNLSETQNQPQS
130 140 150
>>XP_011531053 (OMIM: 604295) PREDICTED: ventral anterio (150 aa)
initn: 984 init1: 984 opt: 984 Z-score: 672.8 bits: 131.5 E(85289): 9.7e-31
Smith-Waterman score: 984; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145)
10 20 30 40 50 60
pF1KB7 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATS
:::::::::::::::::::::::::
XP_011 FQRCQYVVGRERTELARQLNLSETQNQPQS
130 140 150
>>NP_001106175 (OMIM: 604294,614402) ventral anterior ho (334 aa)
initn: 691 init1: 598 opt: 739 Z-score: 507.0 bits: 102.0 E(85289): 1.7e-21
Smith-Waterman score: 747; 57.6% identity (71.0% similar) in 245 aa overlap (45-268:46-285)
20 30 40 50 60 70
pF1KB7 RAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRESGADSDGQPGPGEAD
: :. ..: :. . . :.. : :
NP_001 AEAARVSKNAHKESRESKGAEGNLPAAFLKEPQGAFSASGAAEDCNKSKSNSAADP---D
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB7 HCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTE
.:::::::::::.::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 YCRRILVRDAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTE
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB7 LARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNILRLLEQGRLLSV
:::::::::::::::::::::::::::..: : : : .::. :: ..:::::::::::
NP_001 LARQLNLSETQVKVWFQNRRTKQKKDQGKDSELR--SVVSETAATCSVLRLLEQGRLLSP
140 150 160 170 180 190
200 210 220 230 240
pF1KB7 PRAPSLL------ALTPSL--PGLPASHRGTSLGDPRNSSPRL-NPLSSASASPPL----
: :.:: :: .: :.::: :.. :. .. .: ..:: ::
NP_001 PGLPALLPPCATGALGSALRGPSLPALGAGAAAGSAAAAAAAAPGPAGAASPHPPAVGGA
200 210 220 230 240 250
250 260 270 280 290
pF1KB7 PPPLPAV---CFSSAP-----LLDLPAGYELGSSAFEPYSWLERKVGSASSCKKANT
: : :: ..:: :..::. ::: :
NP_001 PGPGPAGPGGLHAGAPAAGHSLFSLPVPSLLGSVASRLSSAPLTMAGSLAGNLQELSARY
260 270 280 290 300 310
NP_001 LSSSAFEPYSRTNNKEGAEKKALD
320 330
>>NP_954582 (OMIM: 604294,614402) ventral anterior homeo (186 aa)
initn: 508 init1: 461 opt: 488 Z-score: 344.4 bits: 71.0 E(85289): 1.9e-12
Smith-Waterman score: 488; 62.6% identity (80.2% similar) in 131 aa overlap (45-174:46-173)
20 30 40 50 60 70
pF1KB7 RAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRESGADSDGQPGPGEAD
: :. ..: :. . . :.. : :
NP_954 AEAARVSKNAHKESRESKGAEGNLPAAFLKEPQGAFSASGAAEDCNKSKSNSAADP---D
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB7 HCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTE
.:::::::::::.::::.::::::::::::::::::::::::::::::::::::::::::
NP_954 YCRRILVRDAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTE
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB7 LARQLNLSETQVKVWFQNRRTKQK-KDQSRDLEKRASSSASEAFATSNILRLLEQGRLLS
:::::::::::.. .:.: :. : :.. .:. ... :
NP_954 LARQLNLSETQANSEENNERFKRGIKKQKKKRKKEPANDESRRGDSGGRGWQPL
140 150 160 170 180
200 210 220 230 240 250
pF1KB7 VPRAPSLLALTPSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPPLPPPLPAVCFSSA
>>NP_001980 (OMIM: 142996) homeobox even-skipped homolog (407 aa)
initn: 333 init1: 215 opt: 293 Z-score: 211.7 bits: 47.6 E(85289): 4.7e-05
Smith-Waterman score: 302; 34.1% identity (50.2% similar) in 317 aa overlap (12-283:55-358)
10 20 30 40
pF1KB7 MGDGGAERDRGPARRAESGGGGGRCGDRSG-AGDLRADGGG
:: : : :::: . .: ::. : : :
NP_001 SNLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATR-ERGGGGPEEEPVDGLAGS--AAGPG
30 40 50 60 70 80
50 60 70 80
pF1KB7 HSPTEVAGTSASSPAGSRESGADS---DGQPGPG--EADHCRRILV-------------R
: .:::.. .: : ..:: .:::. . :.: ..: : .
NP_001 AEP-QVAGAAMLGP-GPPAPSVDSLSGQGQPSSSDTESDFYEEIEVSCTPDCATGNAEYQ
90 100 110 120 130
90 100 110
pF1KB7 DAKGTIREIVL--PKGLDL----------------------DRPKRTRTSFTAEQLYRLE
.::. : .. :.: . :. .: ::.:: ::. :::
NP_001 HSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLACSASDQMRRYRTAFTREQIARLE
140 150 160 170 180 190
120 130 140 150 160 170
pF1KB7 MEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFA
:: : .:: .: ::: ::: :: .:::::::: :.:... : :. ::
NP_001 KEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQR---LAMTWPHPADPAFY
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB7 TSNILRLLEQGRLLSVPRAPSLLALTPSLP-GLPASHRGTSLGDPRNSSPRLNPLSSASA
: . . : : : :: : : : :: :. ... ..: ..: : ::.. .
NP_001 TYMMSHAAAAGGL-PYPF-PSHLPLPYYSPVGLGAASAASAAASPFSGS--LRPLDTFRV
260 270 280 290 300 310
240 250 260 270 280 290
pF1KB7 -SPPLPPPLPAVCFSSAPLLDLPAGYELGSSAFEPYSWLERKVGSASSCKKANT
: : : : : :: :: . ::.:: : : : . : :.
NP_001 LSQPYPRPELLCAFRHPPLYPGPA-HGLGASAGGPCSCLACHSGPANGLAPRAAAASDFT
320 330 340 350 360 370
NP_001 CASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
380 390 400
>>NP_001291448 (OMIM: 142996) homeobox even-skipped homo (225 aa)
initn: 227 init1: 209 opt: 287 Z-score: 210.8 bits: 46.6 E(85289): 5.3e-05
Smith-Waterman score: 287; 39.9% identity (55.2% similar) in 183 aa overlap (103-283:2-176)
80 90 100 110 120 130
pF1KB7 ADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRER
.: ::.:: ::. ::: :: : .:: .:
NP_001 MRRYRTAFTREQIARLEKEFYRENYVSRPRR
10 20 30
140 150 160 170 180 190
pF1KB7 TELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNILRLLEQGRLL
::: ::: :: .:::::::: :.:... : :. :: : . . : :
NP_001 CELAAALNLPETTIKVWFQNRRMKDKRQR---LAMTWPHPADPAFYTYMMSHAAAAGGL-
40 50 60 70 80
200 210 220 230 240 250
pF1KB7 SVPRAPSLLALTPSLP-GLPASHRGTSLGDPRNSSPRLNPLSSASA-SPPLPPPLPAVCF
: :: : : : :: :. ... ..: ..: : ::.. . : : : : :
NP_001 PYPF-PSHLPLPYYSPVGLGAASAASAAASPFSGS--LRPLDTFRVLSQPYPRPELLCAF
90 100 110 120 130 140
260 270 280 290
pF1KB7 SSAPLLDLPAGYELGSSAFEPYSWLERKVGSASSCKKANT
:: :: . ::.:: : : : . : :.
NP_001 RHPPLYPGPA-HGLGASAGGPCSCLACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFA
150 160 170 180 190 200
NP_001 PSVLSKASSVALDQREEVPLTR
210 220
>>NP_001291449 (OMIM: 142996) homeobox even-skipped homo (225 aa)
initn: 227 init1: 209 opt: 287 Z-score: 210.8 bits: 46.6 E(85289): 5.3e-05
Smith-Waterman score: 287; 39.9% identity (55.2% similar) in 183 aa overlap (103-283:2-176)
80 90 100 110 120 130
pF1KB7 ADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRER
.: ::.:: ::. ::: :: : .:: .:
NP_001 MRRYRTAFTREQIARLEKEFYRENYVSRPRR
10 20 30
140 150 160 170 180 190
pF1KB7 TELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNILRLLEQGRLL
::: ::: :: .:::::::: :.:... : :. :: : . . : :
NP_001 CELAAALNLPETTIKVWFQNRRMKDKRQR---LAMTWPHPADPAFYTYMMSHAAAAGGL-
40 50 60 70 80
200 210 220 230 240 250
pF1KB7 SVPRAPSLLALTPSLP-GLPASHRGTSLGDPRNSSPRLNPLSSASA-SPPLPPPLPAVCF
: :: : : : :: :. ... ..: ..: : ::.. . : : : : :
NP_001 PYPF-PSHLPLPYYSPVGLGAASAASAAASPFSGS--LRPLDTFRVLSQPYPRPELLCAF
90 100 110 120 130 140
260 270 280 290
pF1KB7 SSAPLLDLPAGYELGSSAFEPYSWLERKVGSASSCKKANT
:: :: . ::.:: : : : . : :.
NP_001 RHPPLYPGPA-HGLGASAGGPCSCLACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFA
150 160 170 180 190 200
NP_001 PSVLSKASSVALDQREEVPLTR
210 220
>>NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [Homo (255 aa)
initn: 268 init1: 236 opt: 282 Z-score: 206.8 bits: 46.0 E(85289): 8.8e-05
Smith-Waterman score: 282; 35.4% identity (56.9% similar) in 181 aa overlap (9-182:56-235)
10 20 30
pF1KB7 MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADG
: : . :: : : : :. .
NP_055 GGYLGEQGADYYGGGAQGADFQPPGLYPRPDFGEQPFGGSGPGPGSALPARGHGQEPGGP
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 GGH--SPTE-VAGTSASSPA---GSRESGADSDGQPGPGEADHCRRILVRDAKGTIREIV
::: .: : . : :: :.: . .. :: : : . .. : . . :
NP_055 GGHYAAPGEPCPAPPAPPPAPLPGARAYSQSDPKQPPSGTALKQPAVVYPWMKKVHVNSV
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 LPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQN
:. .:::.::..: .:. .:: ::. .:.. :.: :.:. : ::: :.:.::::
NP_055 NPNYTG-GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQN
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB7 RRTKQKKDQSRDLEK-RASSSASEAFATSNILRLLEQGRLLSVPRAPSLLALTPSLPGLP
:: : :::.. : :.:::.: . .:..
NP_055 RRMKWKKDHKLPNTKGRSSSSSSSSSCSSSVAPSQHLQPMAKDHHTDLTTL
210 220 230 240 250
220 230 240 250 260 270
pF1KB7 ASHRGTSLGDPRNSSPRLNPLSSASASPPLPPPLPAVCFSSAPLLDLPAGYELGSSAFEP
290 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:47:27 2016 done: Sat Nov 5 17:47:28 2016
Total Scan time: 9.390 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]