Result of FASTA (omim) for
pFN21AB7886
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7886, 651 aa
1>>>pF1KB7886 651 - 651 aa - 651 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3697+/-0.000391; mu= 19.5238+/- 0.024
mean_var=73.7459+/-14.509, 0's: 0 Z-trim(112.4): 13 B-trim: 121 in 1/54
Lambda= 0.149350
statistics sampled from 21310 (21316) to 21310 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.25), width: 16
Scan time: 11.110
The best scores are: opt bits E(85289)
NP_060897 (OMIM: 605121) RNA polymerase I-specific ( 651) 4351 947.3 0
NP_001287993 (OMIM: 605121) RNA polymerase I-speci ( 621) 3636 793.2 0
XP_011520842 (OMIM: 605121) PREDICTED: RNA polymer ( 447) 3009 658.1 2e-188
XP_011520843 (OMIM: 605121) PREDICTED: RNA polymer ( 443) 2900 634.6 2.3e-181
XP_005255434 (OMIM: 605121) PREDICTED: RNA polymer ( 439) 2897 633.9 3.6e-181
XP_005255433 (OMIM: 605121) PREDICTED: RNA polymer ( 439) 2897 633.9 3.6e-181
>>NP_060897 (OMIM: 605121) RNA polymerase I-specific tra (651 aa)
initn: 4351 init1: 4351 opt: 4351 Z-score: 5064.2 bits: 947.3 E(85289): 0
Smith-Waterman score: 4351; 100.0% identity (100.0% similar) in 651 aa overlap (1-651:1-651)
10 20 30 40 50 60
pF1KB7 MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI
550 560 570 580 590 600
610 620 630 640 650
pF1KB7 VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
610 620 630 640 650
>>NP_001287993 (OMIM: 605121) RNA polymerase I-specific (621 aa)
initn: 3626 init1: 3626 opt: 3636 Z-score: 4231.9 bits: 793.2 E(85289): 0
Smith-Waterman score: 4090; 95.4% identity (95.4% similar) in 651 aa overlap (1-651:1-621)
10 20 30 40 50 60
pF1KB7 MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLN
:::::::::::::::::::::::: ::::::
NP_001 LKYKKGETNDFELLKNQLLDPDIK------------------------------RLPWLN
70 80 90
130 140 150 160 170 180
pF1KB7 RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB7 ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB7 HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB7 ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB7 SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB7 TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB7 EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB7 RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI
520 530 540 550 560 570
610 620 630 640 650
pF1KB7 VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
580 590 600 610 620
>>XP_011520842 (OMIM: 605121) PREDICTED: RNA polymerase (447 aa)
initn: 3009 init1: 3009 opt: 3009 Z-score: 3503.8 bits: 658.1 E(85289): 2e-188
Smith-Waterman score: 3009; 100.0% identity (100.0% similar) in 447 aa overlap (205-651:1-447)
180 190 200 210 220 230
pF1KB7 EDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISV
::::::::::::::::::::::::::::::
XP_011 MPILVEKFPFVRKSERTLECYVHNLLRISV
10 20 30
240 250 260 270 280 290
pF1KB7 YFPTLRHEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YFPTLRHEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEH
40 50 60 70 80 90
300 310 320 330 340 350
pF1KB7 ETKAGPERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETKAGPERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKL
100 110 120 130 140 150
360 370 380 390 400 410
pF1KB7 LLPTHASCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLPTHASCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARA
160 170 180 190 200 210
420 430 440 450 460 470
pF1KB7 KFIPLITVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KFIPLITVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQL
220 230 240 250 260 270
480 490 500 510 520 530
pF1KB7 LSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNR
280 290 300 310 320 330
540 550 560 570 580 590
pF1KB7 QMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKK
340 350 360 370 380 390
600 610 620 630 640 650
pF1KB7 PMKKDIVEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMKKDIVEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
400 410 420 430 440
>>XP_011520843 (OMIM: 605121) PREDICTED: RNA polymerase (443 aa)
initn: 2900 init1: 2900 opt: 2900 Z-score: 3377.0 bits: 634.6 E(85289): 2.3e-181
Smith-Waterman score: 2900; 99.8% identity (100.0% similar) in 431 aa overlap (221-651:13-443)
200 210 220 230 240 250
pF1KB7 QIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLRHEILELIIEK
:.::::::::::::::::::::::::::::
XP_011 MSQSLANNSKICTIECYVHNLLRISVYFPTLRHEILELIIEK
10 20 30 40
260 270 280 290 300 310
pF1KB7 LLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHPV
50 60 70 80 90 100
320 330 340 350 360 370
pF1KB7 AERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFY
110 120 130 140 150 160
380 390 400 410 420 430
pF1KB7 LCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLV
170 180 190 200 210 220
440 450 460 470 480 490
pF1KB7 NWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLN
230 240 250 260 270 280
500 510 520 530 540 550
pF1KB7 FERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQ
290 300 310 320 330 340
560 570 580 590 600 610
pF1KB7 ICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFLK
350 360 370 380 390 400
620 630 640 650
pF1KB7 GEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
:::::::::::::::::::::::::::::::::::::::::
XP_011 GEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
410 420 430 440
>>XP_005255434 (OMIM: 605121) PREDICTED: RNA polymerase (439 aa)
initn: 2897 init1: 2897 opt: 2897 Z-score: 3373.5 bits: 633.9 E(85289): 3.6e-181
Smith-Waterman score: 2897; 99.3% identity (99.8% similar) in 432 aa overlap (220-651:8-439)
190 200 210 220 230 240
pF1KB7 LQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLRHEILELIIE
. .:::::::::::::::::::::::::::
XP_005 MFQILMMKMIECYVHNLLRISVYFPTLRHEILELIIE
10 20 30
250 260 270 280 290 300
pF1KB7 KLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHP
40 50 60 70 80 90
310 320 330 340 350 360
pF1KB7 VAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMF
100 110 120 130 140 150
370 380 390 400 410 420
pF1KB7 YLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLL
160 170 180 190 200 210
430 440 450 460 470 480
pF1KB7 VNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSL
220 230 240 250 260 270
490 500 510 520 530 540
pF1KB7 NFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSV
280 290 300 310 320 330
550 560 570 580 590 600
pF1KB7 QICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFL
340 350 360 370 380 390
610 620 630 640 650
pF1KB7 KGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
::::::::::::::::::::::::::::::::::::::::::
XP_005 KGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
400 410 420 430
>>XP_005255433 (OMIM: 605121) PREDICTED: RNA polymerase (439 aa)
initn: 2897 init1: 2897 opt: 2897 Z-score: 3373.5 bits: 633.9 E(85289): 3.6e-181
Smith-Waterman score: 2897; 99.3% identity (99.8% similar) in 432 aa overlap (220-651:8-439)
190 200 210 220 230 240
pF1KB7 LQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLRHEILELIIE
. .:::::::::::::::::::::::::::
XP_005 MFQILMMKMIECYVHNLLRISVYFPTLRHEILELIIE
10 20 30
250 260 270 280 290 300
pF1KB7 KLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHP
40 50 60 70 80 90
310 320 330 340 350 360
pF1KB7 VAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMF
100 110 120 130 140 150
370 380 390 400 410 420
pF1KB7 YLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLL
160 170 180 190 200 210
430 440 450 460 470 480
pF1KB7 VNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSL
220 230 240 250 260 270
490 500 510 520 530 540
pF1KB7 NFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSV
280 290 300 310 320 330
550 560 570 580 590 600
pF1KB7 QICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFL
340 350 360 370 380 390
610 620 630 640 650
pF1KB7 KGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
::::::::::::::::::::::::::::::::::::::::::
XP_005 KGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
400 410 420 430
651 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:21:14 2016 done: Sat Nov 5 16:21:16 2016
Total Scan time: 11.110 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]