Result of FASTA (ccds) for
pFN21AB7940
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7940, 240 aa
1>>>pF1KB7940 240 - 240 aa - 240 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5177+/-0.000794; mu= 10.3754+/- 0.048
mean_var=120.8391+/-23.727, 0's: 0 Z-trim(111.6): 48 B-trim: 187 in 2/51
Lambda= 0.116673
statistics sampled from 12486 (12532) to 12486 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.385), width: 16
Scan time: 1.800
The best scores are: opt bits E(32554)
CCDS33425.1 ING5 gene_id:84289|Hs108|chr2 ( 240) 1656 289.0 1.9e-78
CCDS82586.1 ING5 gene_id:84289|Hs108|chr2 ( 226) 1541 269.6 1.2e-72
CCDS44814.1 ING4 gene_id:51147|Hs108|chr12 ( 246) 1165 206.4 1.4e-53
CCDS44815.1 ING4 gene_id:51147|Hs108|chr12 ( 245) 1162 205.9 2e-53
CCDS82585.1 ING5 gene_id:84289|Hs108|chr2 ( 254) 982 175.6 2.8e-44
CCDS44816.1 ING4 gene_id:51147|Hs108|chr12 ( 179) 711 129.8 1.1e-30
CCDS44813.1 ING4 gene_id:51147|Hs108|chr12 ( 249) 711 130.0 1.5e-30
CCDS8555.1 ING4 gene_id:51147|Hs108|chr12 ( 248) 694 127.1 1.1e-29
CCDS3833.1 ING2 gene_id:3622|Hs108|chr4 ( 280) 579 107.8 7.9e-24
CCDS44812.1 ING4 gene_id:51147|Hs108|chr12 ( 225) 567 105.7 2.7e-23
CCDS9516.1 ING1 gene_id:3621|Hs108|chr13 ( 279) 421 81.2 8e-16
CCDS9517.1 ING1 gene_id:3621|Hs108|chr13 ( 422) 423 81.7 8.6e-16
CCDS9515.1 ING1 gene_id:3621|Hs108|chr13 ( 235) 418 80.6 9.9e-16
CCDS9518.1 ING1 gene_id:3621|Hs108|chr13 ( 210) 416 80.2 1.1e-15
CCDS5778.1 ING3 gene_id:54556|Hs108|chr7 ( 418) 372 73.1 3.3e-13
>>CCDS33425.1 ING5 gene_id:84289|Hs108|chr2 (240 aa)
initn: 1656 init1: 1656 opt: 1656 Z-score: 1522.0 bits: 289.0 E(32554): 1.9e-78
Smith-Waterman score: 1656; 100.0% identity (100.0% similar) in 240 aa overlap (1-240:1-240)
10 20 30 40 50 60
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRKKK
190 200 210 220 230 240
>>CCDS82586.1 ING5 gene_id:84289|Hs108|chr2 (226 aa)
initn: 1541 init1: 1541 opt: 1541 Z-score: 1417.7 bits: 269.6 E(32554): 1.2e-72
Smith-Waterman score: 1541; 100.0% identity (100.0% similar) in 226 aa overlap (1-226:1-226)
10 20 30 40 50 60
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRKKK
::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGK
190 200 210 220
>>CCDS44814.1 ING4 gene_id:51147|Hs108|chr12 (246 aa)
initn: 1106 init1: 607 opt: 1165 Z-score: 1075.2 bits: 206.4 E(32554): 1.4e-53
Smith-Waterman score: 1165; 69.9% identity (88.8% similar) in 249 aa overlap (1-239:1-246)
10 20 30 40 50 60
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
::..:::::::::::::: ::::::::::.::::::: ::::: ::.::.:....:: ..
CCDS44 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD
.. :..::.::.::::..::::::::::::::::::::::.::::::::::.: .:.::
CCDS44 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPK--KKKHK---GGSEF---TDTILS
..::.. :.:: ::::...:.:.. ..:.:..:: .:: : . :. . :. :
CCDS44 YDSSSS---KEGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP
::::::::::::::::::::::::::::::::::::: ::::::::: :::::.::::::
CCDS44 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
180 190 200 210 220 230
240
pF1KB7 RCVQEKRKKK
:: ::..::
CCDS44 RCSQERKKK
240
>>CCDS44815.1 ING4 gene_id:51147|Hs108|chr12 (245 aa)
initn: 1085 init1: 586 opt: 1162 Z-score: 1072.5 bits: 205.9 E(32554): 2e-53
Smith-Waterman score: 1162; 69.9% identity (88.4% similar) in 249 aa overlap (1-239:1-245)
10 20 30 40 50 60
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
::..:::::::::::::: ::::::::::.::::::: ::::: ::.::.:....:: ..
CCDS44 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD
.. :..::.::.::::..::::::::::::::::::::::.::::::::::.: .:.::
CCDS44 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPK--KKKHK---GGSEF---TDTILS
..::.. ::: ::::...:.:.. ..:.:..:: .:: : . :. . :. :
CCDS44 YDSSSS----KGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP
::::::::::::::::::::::::::::::::::::: ::::::::: :::::.::::::
CCDS44 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
180 190 200 210 220 230
240
pF1KB7 RCVQEKRKKK
:: ::..::
CCDS44 RCSQERKKK
240
>>CCDS82585.1 ING5 gene_id:84289|Hs108|chr2 (254 aa)
initn: 1016 init1: 971 opt: 982 Z-score: 908.5 bits: 175.6 E(32554): 2.8e-44
Smith-Waterman score: 982; 89.0% identity (93.6% similar) in 173 aa overlap (11-183:13-181)
10 20 30 40 50
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSP
: .:::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MGARVTPRDSGGLIGIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 DQRVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DQRVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 DFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLD
:::::::::::::::::::::::::::::::::::::::::::. ...::. :. .
CCDS82 DFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGG---NSVLSL-PAPSCS
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 MPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRK
: :
CCDS82 EPEGPVPTVPFLRESGTPPGLFLTQCCFSRWQCCSCPIARRRDRLVRPALKLGSDVQGAK
180 190 200 210 220 230
>>CCDS44816.1 ING4 gene_id:51147|Hs108|chr12 (179 aa)
initn: 599 init1: 580 opt: 711 Z-score: 664.0 bits: 129.8 E(32554): 1.1e-30
Smith-Waterman score: 711; 67.1% identity (92.5% similar) in 161 aa overlap (1-159:1-161)
10 20 30 40 50 60
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
::..:::::::::::::: ::::::::::.::::::: ::::: ::.::.:....:: ..
CCDS44 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD
.. :..::.::.::::..::::::::::::::::::::::.::::::::::.: .:.::
CCDS44 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLD
..::...: :::: ::::...:.:.. ..:.:..:: ..:
CCDS44 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTVPLSGSILPVWG
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 MPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRK
>>CCDS44813.1 ING4 gene_id:51147|Hs108|chr12 (249 aa)
initn: 1098 init1: 580 opt: 711 Z-score: 662.1 bits: 130.0 E(32554): 1.5e-30
Smith-Waterman score: 1194; 70.7% identity (89.6% similar) in 249 aa overlap (1-239:1-249)
10 20 30 40 50 60
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
::..:::::::::::::: ::::::::::.::::::: ::::: ::.::.:....:: ..
CCDS44 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD
.. :..::.::.::::..::::::::::::::::::::::.::::::::::.: .:.::
CCDS44 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPK--KKKHK---GGSEF---TDTILS
..::...: :::: ::::...:.:.. ..:.:..:: .:: : . :. . :. :
CCDS44 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP
::::::::::::::::::::::::::::::::::::: ::::::::: :::::.::::::
CCDS44 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
190 200 210 220 230 240
240
pF1KB7 RCVQEKRKKK
:: ::..::
CCDS44 RCSQERKKK
>>CCDS8555.1 ING4 gene_id:51147|Hs108|chr12 (248 aa)
initn: 1138 init1: 639 opt: 694 Z-score: 646.6 bits: 127.1 E(32554): 1.1e-29
Smith-Waterman score: 1177; 70.3% identity (89.6% similar) in 249 aa overlap (1-239:1-248)
10 20 30 40 50 60
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
::..:::::::::::::: ::::::::::.::::::: ::::: ::.::.:....:: ..
CCDS85 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD
.. :..::.::.::::..::::::::::::::::::::::.::::::::::.: .:.::
CCDS85 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPK--KKKHK---GGSEF---TDTILS
..::...: ::.: ::::...:.:.. ..:.:..:: .:: : . :. . :. :
CCDS85 YDSSSSKG-KKSRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP
::::::::::::::::::::::::::::::::::::: ::::::::: :::::.::::::
CCDS85 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
180 190 200 210 220 230
240
pF1KB7 RCVQEKRKKK
:: ::..::
CCDS85 RCSQERKKK
240
>>CCDS3833.1 ING2 gene_id:3622|Hs108|chr4 (280 aa)
initn: 499 init1: 368 opt: 579 Z-score: 541.3 bits: 107.8 E(32554): 7.9e-24
Smith-Waterman score: 579; 37.8% identity (69.7% similar) in 241 aa overlap (6-238:27-264)
10 20 30
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKK
:.. ::. .:.:: ..::: ...::::.. ..
CCDS38 MLGQQQQQLYSSAALLTGERSRLLTCYVQDYLECVESLPHDMQRNVSVLRELDNKYQETL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 AEIDILAAEYISTVKTLSPDQRVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRR
::: . .: . :. .:...: .: : . .: .:.:.:.. : :.:... :.
CCDS38 KEIDDVYEKY-KKEDDLNQKKRLQQL--LQRALINSQELGDEKIQIVTQMLELVENRARQ
70 80 90 100 110
100 110 120 130 140 150
pF1KB7 LD------ADLARFE-ADLKDKMEGSDFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDT
.. : :. : :. : ::..:. : :. : .. .... . : . ...
CCDS38 MELHSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMANGIEDCDDQP
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB7 PKKKKHKGGSEFTDT-ILSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEW
::.:: :.... . . . .. ... .::::::::::.:::::::::::: .:::::
CCDS38 PKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEW
180 190 200 210 220 230
220 230 240
pF1KB7 FHFACVDLTTKPKGKWFCPRCVQEKRKKK
:::.::.:: ::::::.::.: ...:
CCDS38 FHFSCVSLTYKPKGKWYCPKCRGDNEKTMDKSTEKTKKDRRSR
240 250 260 270 280
>>CCDS44812.1 ING4 gene_id:51147|Hs108|chr12 (225 aa)
initn: 889 init1: 513 opt: 567 Z-score: 531.7 bits: 105.7 E(32554): 2.7e-23
Smith-Waterman score: 992; 61.4% identity (80.7% similar) in 249 aa overlap (1-239:1-225)
10 20 30 40 50 60
pF1KB7 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
::..::::::::.. ::::: ::.::.:....:: ..
CCDS44 MAAGMYLEHYLDNL------------------------KAEIDKLATEYMSSARSLSSEE
10 20 30
70 80 90 100 110
pF1KB7 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD
.. :..::.::.::::..::::::::::::::::::::::.::::::::::.: .:.::
CCDS44 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB7 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPK--KKKHK---GGSEF---TDTILS
..::...: :::: ::::...:.:.. ..:.:..:: .:: : . :. . :. :
CCDS44 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB7 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP
::::::::::::::::::::::::::::::::::::: ::::::::: :::::.::::::
CCDS44 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
160 170 180 190 200 210
240
pF1KB7 RCVQEKRKKK
:: ::..::
CCDS44 RCSQERKKK
220
240 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:41:53 2016 done: Sat Nov 5 14:41:53 2016
Total Scan time: 1.800 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]