Result of FASTA (ccds) for
pFN21AB5654
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5654, 331 aa
1>>>pF1KB5654 331 - 331 aa - 331 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2679+/-0.000968; mu= 16.0749+/- 0.058
mean_var=64.1818+/-12.643, 0's: 0 Z-trim(104.6): 28 B-trim: 31 in 1/49
Lambda= 0.160092
statistics sampled from 7963 (7982) to 7963 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.245), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS968.1 CTSS gene_id:1520|Hs108|chr1 ( 331) 2292 538.2 3.5e-153
CCDS55634.1 CTSS gene_id:1520|Hs108|chr1 ( 281) 1378 327.1 1.1e-89
CCDS969.1 CTSK gene_id:1513|Hs108|chr1 ( 329) 1241 295.5 4.1e-80
CCDS6723.1 CTSV gene_id:1515|Hs108|chr9 ( 334) 1119 267.3 1.3e-71
CCDS6675.1 CTSL gene_id:1514|Hs108|chr9 ( 333) 1101 263.1 2.2e-70
CCDS10308.1 CTSH gene_id:1512|Hs108|chr15 ( 335) 723 175.8 4.3e-44
CCDS8144.1 CTSF gene_id:8722|Hs108|chr11 ( 484) 561 138.5 1.1e-32
CCDS3794.1 CTSO gene_id:1519|Hs108|chr4 ( 321) 502 124.8 9.6e-29
CCDS8117.1 CTSW gene_id:1521|Hs108|chr11 ( 376) 391 99.2 5.7e-21
CCDS13474.1 CTSZ gene_id:1522|Hs108|chr20 ( 303) 272 71.6 8.9e-13
>>CCDS968.1 CTSS gene_id:1520|Hs108|chr1 (331 aa)
initn: 2292 init1: 2292 opt: 2292 Z-score: 2863.7 bits: 538.2 E(32554): 3.5e-153
Smith-Waterman score: 2292; 99.7% identity (99.7% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNWILPDSVD
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
CCDS96 LHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNRILPDSVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 WREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 WREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 NGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 AVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 AVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSW
250 260 270 280 290 300
310 320 330
pF1KB5 GHNFGEEGYIRMARNKGNHCGIASFPSYPEI
:::::::::::::::::::::::::::::::
CCDS96 GHNFGEEGYIRMARNKGNHCGIASFPSYPEI
310 320 330
>>CCDS55634.1 CTSS gene_id:1520|Hs108|chr1 (281 aa)
initn: 1377 init1: 1377 opt: 1378 Z-score: 1723.9 bits: 327.1 E(32554): 1.1e-89
Smith-Waterman score: 1853; 84.9% identity (84.9% similar) in 331 aa overlap (1-331:1-281)
10 20 30 40 50 60
pF1KB5 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNWILPDSVD
:::::::::::::::::::::::
CCDS55 LHNLEHSMGMHSYDLGMNHLGDM-------------------------------------
70 80
130 140 150 160 170 180
pF1KB5 WREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGC
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 -------------GSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGC
90 100 110 120 130
190 200 210 220 230 240
pF1KB5 NGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKE
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB5 AVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSW
200 210 220 230 240 250
310 320 330
pF1KB5 GHNFGEEGYIRMARNKGNHCGIASFPSYPEI
:::::::::::::::::::::::::::::::
CCDS55 GHNFGEEGYIRMARNKGNHCGIASFPSYPEI
260 270 280
>>CCDS969.1 CTSK gene_id:1513|Hs108|chr1 (329 aa)
initn: 1097 init1: 467 opt: 1241 Z-score: 1551.8 bits: 295.5 E(32554): 4.1e-80
Smith-Waterman score: 1241; 55.8% identity (79.9% similar) in 328 aa overlap (7-331:6-329)
10 20 30 40 50 60
pF1KB5 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVM
:::. . : :. . :: ::.:::::. :::..: .: ::::::::::..
CCDS96 MWGLKVLLLPVVSFA-LYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYIS
10 20 30 40 50
70 80 90 100 110
pF1KB5 LHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNWI--LPDS
.:::: :.:.:.:.:.::::::::::::.. :..:.:: . .:. :.: :::
CCDS96 IHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 VDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNK
::.:.:: :: :: ::.::.:::::.:::::.::: :::::..:: :::::: .: :
CCDS96 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---ND
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 GCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVL
::.::.::.::::. :.::::. .::: .....:.:. .:: : : :.: : : .:
CCDS96 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKAL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 KEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYGDLNGKEYWLVK
:.::: :::::..:: :: .: .::::. :: ..:.::.::.:::: .:...:..:
CCDS96 KRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIK
240 250 260 270 280 290
300 310 320 330
pF1KB5 NSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
::::.:.:..::: :::::.: ::::.. :.:..
CCDS96 NSWGENWGNKGYILMARNKNNACGIANLASFPKM
300 310 320
>>CCDS6723.1 CTSV gene_id:1515|Hs108|chr9 (334 aa)
initn: 1056 init1: 363 opt: 1119 Z-score: 1399.5 bits: 267.3 E(32554): 1.3e-71
Smith-Waterman score: 1119; 50.6% identity (78.5% similar) in 326 aa overlap (12-331:15-334)
10 20 30 40 50
pF1KB5 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLK
.::: .. : .:: .:. :: :. . : :::. :: .::::.:
CCDS67 MNLSLVLAAFCLGIASAVPKF--DQNLDTKWYQWKATHRRLYGA-NEEGWRRAVWEKNMK
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 FVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNWI-LP
.. ::: :.:.: :.. ..:: .::::.:: ..:. .: ...... ... .: .. ::
CCDS67 MIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFR-NQKFRKGKVFR-EPLFLDLP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 DSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYG
:::::.:: :: :: : .::.::::::.::::.:. ::::::::: ::::::: . :
CCDS67 KSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ-G
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGRED
:.:::::::. ::::. .: :.::. :::: :.:. :.: . .:. . .: . :.:
CCDS67 NQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT-QNVNHGVLVVGYG----DLNGK
.: .:::. ::.::..:: : :: .:.::.:.::.:. .:..::::::::: . :..
CCDS67 ALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNS
240 250 260 270 280 290
300 310 320 330
pF1KB5 EYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
.::::::::: ..: .::...:..:.::::::. :::..
CCDS67 KYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV
300 310 320 330
>>CCDS6675.1 CTSL gene_id:1514|Hs108|chr9 (333 aa)
initn: 937 init1: 293 opt: 1101 Z-score: 1377.0 bits: 263.1 E(32554): 2.2e-70
Smith-Waterman score: 1101; 49.7% identity (75.6% similar) in 328 aa overlap (14-331:15-333)
10 20 30 40 50
pF1KB5 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFV
: : : : .:. .: :: ... : :::. :: .::::.:..
CCDS66 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMI
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 MLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSL--RVPSQ---WQRNITYKSNPNWI
::: :. : ::. ..:: .::::::: ..:... : : . .:. . :..
CCDS66 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEA-----
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK
: :::::::: :: :: ::.::.::::::.::::.:. :::.:.::: ::::::: .
CCDS66 -PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGR
::.:::::.: ::::. :: :.::. ::::.: ...:.:. :: .:. . ....: .
CCDS66 -GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-Q
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 EDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT-QNVNHGVLVVGYG----DLN
: .: .:::. ::.::..:: : ::..:. :.:.::.:. ....::::::::: . .
CCDS66 EKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESD
240 250 260 270 280 290
290 300 310 320 330
pF1KB5 GKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
...:::::::::...: ::..::... ::::::: ::: .
CCDS66 NNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
300 310 320 330
>>CCDS10308.1 CTSH gene_id:1512|Hs108|chr15 (335 aa)
initn: 401 init1: 193 opt: 723 Z-score: 905.1 bits: 175.8 E(32554): 4.3e-44
Smith-Waterman score: 723; 37.6% identity (66.1% similar) in 327 aa overlap (10-329:19-331)
10 20 30 40 50
pF1KB5 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRL-
::..: .: . :.. : . . : : ..:: .::
CCDS10 MWATLPLLCAGAWLLGVPVCGAA--ELCVNSLEKFHFKSWMSKHRKTY--STEEYHHRLQ
10 20 30 40 50
60 70 80 90 100
pF1KB5 IWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMS--LMSSLRVPSQWQRNITYK
. .: . . :: : :.. ...:...::. :. : : . : . :
CCDS10 TFASNWRKINAHN----NGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB5 SNPNWILPDSVDWREKGC-VTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNL
..: : :::::.:: :. :: ::.::.::.::..::::. . . :::..::. :.:
CCDS10 TGP---YPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQL
120 130 140 150 160
170 180 190 200 210 220
pF1KB5 VDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKY
:::. . ..:.::.::. . ::.::. :::: .. .:::.. : :... . .
CCDS10 VDCA-QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDV
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB5 TELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQN---VNHGVLVVG
... :... :::: .::: . .. . .:..::.:.: :: .. :::.::.::
CCDS10 ANITIYDEEAMVEAVALYNPVSFAFEVTQ-DFMMYRTGIYSSTSCHKTPDKVNHAVLAVG
230 240 250 260 270 280
290 300 310 320 330
pF1KB5 YGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
::. :: ::.:::::: ..: .::. . :.: : ::.:. :::
CCDS10 YGEKNGIPYWIVKNSWGPQWGMNGYFLIERGK-NMCGLAACASYPIPLV
290 300 310 320 330
>>CCDS8144.1 CTSF gene_id:8722|Hs108|chr11 (484 aa)
initn: 380 init1: 222 opt: 561 Z-score: 700.5 bits: 138.5 E(32554): 1.1e-32
Smith-Waterman score: 561; 31.3% identity (65.3% similar) in 326 aa overlap (12-327:164-479)
10 20 30
pF1KB5 MKRLVCVLLVCSSAVAQLHKDP-TLD---HHWHLWKK---T
::... :..:: . : . ..:. :
CCDS81 AGEPKSAFTQGSAMISSLSQNHPDNRNETFSSVISLLNEDPLSQDLPVKMASIFKNFVIT
140 150 160 170 180 190
40 50 60 70 80 90
pF1KB5 YGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSS
:.. :. :.: : .. .:. : .... .. . . :.....:.: :: ... .
CCDS81 YNRTYESKEEARWRLSVFVNNM--VRAQKIQ-ALDRGTAQYGVTKFSDLTEEEFRTIYLN
200 210 220 230 240 250
100 110 120 130 140 150
pF1KB5 LRVPSQWQRNITYKSNPNWILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKL
. .. .. .. . . : ::: :: ::.:: :: ::.:::::..: .:.: :
CCDS81 TLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFL
260 270 280 290 300 310
160 170 180 190 200 210
pF1KB5 KTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQ
. : :.::: :.:.:: .:. .:.: ::. ..:.. : . :.... .: :.. :.:.
CCDS81 NQGTLLSLSEQELLDC--DKM-DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCN
320 330 340 350 360
220 230 240 250 260 270
pF1KB5 YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYY--EPSC
.... . . .:: . :. : .:..::.::...: .: :: :. .: :
CCDS81 FSAEKAKVYINDSVELSQN-EQKLAAWLAKRGPISVAINAFGMQF--YRHGISRPLRPLC
370 380 390 400 410 420
280 290 300 310 320 330
pF1KB5 TQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
. ..:.::.::::. . .: .::::: ..::.:: . :..: ::. .. :
CCDS81 SPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGA-CGVNTMASSAVV
430 440 450 460 470 480
CCDS81 D
>>CCDS3794.1 CTSO gene_id:1519|Hs108|chr4 (321 aa)
initn: 398 init1: 241 opt: 502 Z-score: 629.6 bits: 124.8 E(32554): 9.6e-29
Smith-Waterman score: 502; 35.8% identity (64.6% similar) in 254 aa overlap (76-323:68-313)
50 60 70 80 90 100
pF1KB5 AVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRV-PSQWQRN
:.:... . :: ... :: ::.. :
CCDS37 EREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIY--LRSKPSKFPRY
40 50 60 70 80 90
110 120 130 140 150 160
pF1KB5 IT--YKSNPNWILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSL
. . : :: :: :::.: ::.:. : ::.:::::.:::.:. .: : .:
CCDS37 SAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDL
100 110 120 130 140 150
170 180 190 200 210 220
pF1KB5 SAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNK-GIDSDASYPYKAMDQKCQYDSKYRA
:.:...::: :.: ::::: .:.... . . .:. ::.::.. :.: : ..
CCDS37 SVQQVIDCS---YNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHS
160 170 180 190 200 210
230 240 250 260 270
pF1KB5 ATCSK-YTELPYG-REDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHG
. : :. .. .:: . .:. . ::. : ::: :. : .:. . . ..::.
CCDS37 GFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAV--SWQDYLGGIIQHHCSSGEANHA
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB5 VLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
::..:. .. ::.:.:::: ..: .:: .. . .: ::::
CCDS37 VLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHV-KMGSNVCGIADSVSSIFV
280 290 300 310 320
>>CCDS8117.1 CTSW gene_id:1521|Hs108|chr11 (376 aa)
initn: 383 init1: 125 opt: 391 Z-score: 490.0 bits: 99.2 E(32554): 5.7e-21
Smith-Waterman score: 488; 30.6% identity (64.3% similar) in 333 aa overlap (24-326:38-358)
10 20 30 40 50
pF1KB5 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWE
: . ..:.. ....: .:.: : :.
CCDS81 SCLLALLVAGLAQGIRGPLRAQDLGPQPLELKEAFKLFQIQFNRSYLSPEEHAHRLDIFA
10 20 30 40 50 60
60 70 80 90 100
pF1KB5 KNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLR----VPSQWQRNITYKS
.:: .. . :...: . ..:.. ..:.: :: .:.. : :::. :.: .
CCDS81 HNLAQAQ-RLQEEDLG--TAEFGVTPFSDLTEEEFGQLYGYRRAAGGVPSM-GREIR-SE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 NPNWILPDSVDWRE-KGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLV
.:. .: : :::. . .. .: : .:. :::..:.: .:. ... .:..:.:.:.
CCDS81 EPEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB5 DCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPY--KAMDQKCQYDSKYRAATCSK
::. . :. ::.:::. :: ...:.:. :. .::. :. ..:. . ..: .
CCDS81 DCG--RCGD-GCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQD
190 200 210 220 230
230 240 250 260 270 280
pF1KB5 YTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYE-PS-CT-QNVNHGVLVV
. : . : . . .:. ::..: .. . : . :::.:: :. : : :.:.::.:
CCDS81 FIMLQ-NNEHRIAQYLATYGPITVTINMK-P-LQLYRKGVIKATPTTCDPQLVDHSVLLV
240 250 260 270 280 290
290 300 310 320
pF1KB5 GYGDLNGKE--------------------YWLVKNSWGHNFGEEGYIRMARNKGNHCGIA
:.:.....: ::..::::: ..::.::.:. :.. : :::.
CCDS81 GFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGS-NTCGIT
300 310 320 330 340 350
330
pF1KB5 SFPSYPEI
.::
CCDS81 KFPLTARVQKPDMKPRVSCPP
360 370
>>CCDS13474.1 CTSZ gene_id:1522|Hs108|chr20 (303 aa)
initn: 309 init1: 148 opt: 272 Z-score: 342.8 bits: 71.6 E(32554): 8.9e-13
Smith-Waterman score: 370; 33.9% identity (59.4% similar) in 224 aa overlap (115-312:62-275)
90 100 110 120 130
pF1KB5 SEEVMSLMSSLRVPSQWQRNITYKSNPNWILPDSVDWREKGCVTEVKYQGS------CGA
:: : :::. :. .. . ::.
CCDS13 TCYRPLRGDGLAPLGRSTYPRPHEYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGS
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 CWAFSAVGALEAQLKLKT-GKLVS--LSAQNLVDCSTEKYGNKG-CNGGFMTTAFQYIID
::: ....:. ....: : : ::.::..:: :: : :.:: ....:
CCDS13 CWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDC-----GNAGSCEGGNDLSVWDYA-H
100 110 120 130 140
200 210 220 230
pF1KB5 NKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTEL------------PYG----REDVL
..:: ... :.: ::.: :. . .::... : :: :: ..
CCDS13 QHGIPDETCNNYQAKDQEC--DKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMM
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB5 KEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKN
: :: ::.: :. : . . : .:.: : . : .:: : :.:.: .: :::.:.:
CCDS13 AEIYAN-GPISCGIMATE-RLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRN
210 220 230 240 250 260
300 310 320 330
pF1KB5 SWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
:::. .::.:..:.
CCDS13 SWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGDPIV
270 280 290 300
331 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:10:23 2016 done: Sat Nov 5 13:10:24 2016
Total Scan time: 2.330 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]