Result of FASTA (omim) for pFN21AB7965
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7965, 280 aa
  1>>>pF1KB7965 280 - 280 aa - 280 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.5287+/-0.000411; mu= -9.9930+/- 0.026
 mean_var=468.7184+/-97.324, 0's: 0 Z-trim(125.3): 29  B-trim: 856 in 1/60
 Lambda= 0.059240
 statistics sampled from 48834 (48868) to 48834 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.573), width:  16
 Scan time:  9.090

The best scores are:                                      opt bits E(85289)
NP_005515 (OMIM: 139605) transcription factor HES- ( 280) 1916 176.9 3.6e-44
NP_066993 (OMIM: 608060) transcription factor HES- ( 221)  792 80.8 2.5e-15
NP_001135939 (OMIM: 608060) transcription factor H ( 247)  652 68.9 1.1e-11
XP_005244828 (OMIM: 608060) PREDICTED: transcripti ( 189)  476 53.7 3.1e-07
NP_061962 (OMIM: 609970) transcription factor HES- ( 173)  377 45.2  0.0001
NP_036390 (OMIM: 602953) hairy/enhancer-of-split r ( 304)  351 43.2  0.0007
NP_001035798 (OMIM: 602953) hairy/enhancer-of-spli ( 308)  343 42.6  0.0011
NP_061115 (OMIM: 610331) transcription cofactor HE ( 224)  335 41.7  0.0015
NP_001136325 (OMIM: 610331) transcription cofactor ( 222)  334 41.6  0.0016
NP_036391 (OMIM: 604674) hairy/enhancer-of-split r ( 337)  335 41.9  0.0019
XP_016866118 (OMIM: 604674) PREDICTED: hairy/enhan ( 291)  327 41.2  0.0028
XP_016866116 (OMIM: 604674) PREDICTED: hairy/enhan ( 291)  327 41.2  0.0028
XP_016866117 (OMIM: 604674) PREDICTED: hairy/enhan ( 291)  327 41.2  0.0028


>>NP_005515 (OMIM: 139605) transcription factor HES-1 [H  (280 aa)
 initn: 1916 init1: 1916 opt: 1916  Z-score: 913.9  bits: 176.9 E(85289): 3.6e-44
Smith-Waterman score: 1916; 100.0% identity (100.0% similar) in 280 aa overlap (1-280:1-280)

               10        20        30        40        50        60
pF1KB7 MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGGPQHAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGGPQHAP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 FAPPPPLVPIPGGAAPPPGGAPCKLGSQAGEAAKVFGGFQVVPAPDGQFAFLIPNGAFAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FAPPPPLVPIPGGAAPPPGGAPCKLGSQAGEAAKVFGGFQVVPAPDGQFAFLIPNGAFAH
              190       200       210       220       230       240

              250       260       270       280
pF1KB7 SGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN
       ::::::::::::::::::::::::::::::::::::::::
NP_005 SGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN
              250       260       270       280

>>NP_066993 (OMIM: 608060) transcription factor HES-4 is  (221 aa)
 initn: 844 init1: 764 opt: 792  Z-score: 396.0  bits: 80.8 E(85289): 2.5e-15
Smith-Waterman score: 797; 60.9% identity (77.2% similar) in 215 aa overlap (1-200:1-214)

               10        20        30        40        50        60
pF1KB7 MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTL
       : ::   : :.::.:..:::.. :::::..:.::::::::.:::::::::::::.:::::
NP_066 MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKSSKPVMEKRRRARINESLAQLKTL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNE
       :::::.:.:::::::::::::::::.:::.:.:.:.:::::.::.::::::::: ::. :
NP_066 ILDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAE
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KB7 VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPP---------P
       :.:::. :::: ..::.::::::: :. :..    :..  ::  :  : :         :
NP_066 VNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPAPEVYAGRPLLP
              130       140       150       160       170       180

             180            190        200       210       220     
pF1KB7 GPGGPQHAPFAPP--PPL---VPIPGGAAPP-PGGAPCKLGSQAGEAAKVFGGFQVVPAP
       . :::    .:::  : :   .:    :.:  :::                         
NP_066 SLGGP-FPLLAPPLLPGLTRALPAAPRAGPQGPGGPWRPWLR                  
               190       200       210       220                   

         230       240       250       260       270       280
pF1KB7 DGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN

>>NP_001135939 (OMIM: 608060) transcription factor HES-4  (247 aa)
 initn: 836 init1: 628 opt: 652  Z-score: 330.8  bits: 68.9 E(85289): 1.1e-11
Smith-Waterman score: 735; 54.4% identity (68.9% similar) in 241 aa overlap (1-200:1-240)

               10        20        30                              
pF1KB7 MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRK------------------------
       : ::   : :.::.:..:::.. :::::..:.::::                        
NP_001 MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPD
               10        20        30        40        50        60

           40        50        60        70        80        90    
pF1KB7 --SSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRA
         ::::.:::::::::::::.::::::::::.:.:::::::::::::::::.:::.:.:.
NP_001 PQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV
               70        80        90       100       110       120

          100       110       120       130       140       150    
pF1KB7 QMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMT
       :.:::::.::.::::::::: ::. ::.:::. :::: ..::.::::::: :. :..   
NP_001 QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSR
              130       140       150       160       170       180

          160       170                180            190          
pF1KB7 YPGQPHPALQAPPPPP---------PGPGGPQHAPFAPP--PPL---VPIPGGAAPP-PG
        :..  ::  :  : :         :. :::    .:::  : :   .:    :.:  ::
NP_001 RPASLSPAAPAEAPAPEVYAGRPLLPSLGGP-FPLLAPPLLPGLTRALPAAPRAGPQGPG
              190       200       210        220       230         

     200       210       220       230       240       250         
pF1KB7 GAPCKLGSQAGEAAKVFGGFQVVPAPDGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPN
       :                                                           
NP_001 GPWRPWLR                                                    
     240                                                           

>>XP_005244828 (OMIM: 608060) PREDICTED: transcription f  (189 aa)
 initn: 665 init1: 450 opt: 476  Z-score: 250.9  bits: 53.7 E(85289): 3.1e-07
Smith-Waterman score: 545; 47.9% identity (62.3% similar) in 215 aa overlap (1-200:1-182)

               10        20        30        40        50        60
pF1KB7 MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTL
       : ::   : :.::.:..:::.. :::::..:.::::::                      
XP_005 MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKSS----------------------
               10        20        30                              

               70        80        90       100       110       120
pF1KB7 ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNE
                 :::::::::::::::.:::.:.:.:.:::::.::.::::::::: ::. :
XP_005 ----------RHSKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAE
                 40        50        60        70        80        

              130       140       150       160       170          
pF1KB7 VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPP---------P
       :.:::. :::: ..::.::::::: :. :..    :..  ::  :  : :         :
XP_005 VNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPAPEVYAGRPLLP
       90       100       110       120       130       140        

             180            190        200       210       220     
pF1KB7 GPGGPQHAPFAPP--PPL---VPIPGGAAPP-PGGAPCKLGSQAGEAAKVFGGFQVVPAP
       . :::    .:::  : :   .:    :.:  :::                         
XP_005 SLGGP-FPLLAPPLLPGLTRALPAAPRAGPQGPGGPWRPWLR                  
      150        160       170       180                           

         230       240       250       260       270       280
pF1KB7 DGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN

>>NP_061962 (OMIM: 609970) transcription factor HES-2 [H  (173 aa)
 initn: 339 init1: 251 opt: 377  Z-score: 205.7  bits: 45.2 E(85289): 0.0001
Smith-Waterman score: 388; 41.1% identity (62.3% similar) in 175 aa overlap (25-199:4-166)

               10        20        30        40        50        60
pF1KB7 MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTL
                               : .   :.: ::: ::..:::::::::.:::::: :
NP_061                      MGLPRRAGDAAELRKSLKPLLEKRRRARINQSLSQLKGL
                                    10        20        30         

               70        80        90       100       110       120
pF1KB7 ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNE
       ::  : ...:  :::::::.:::::. :..:  ..  .:    :    .:: :.: :. .
NP_061 ILPLLGRENSNCSKLEKADVLEMTVRFLQELPASSWPTAA---PLPCDSYREGYSACVAR
      40        50        60        70           80        90      

              130       140       150       160       170       180
pF1KB7 VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGGPQHAP
       ..: : .:. ..  : .::: ::     .  . :  :      ..:  : :.:..     
NP_061 LARVLPACRVLEPAVSARLLEHL---WRRAASATLDGGRAGDSSGPSAPAPAPAS-----
        100       110          120       130       140             

              190       200       210       220       230       240
pF1KB7 FAPPPPLVPIPGGAAPPPGGAPCKLGSQAGEAAKVFGGFQVVPAPDGQFAFLIPNGAFAH
        :: :  .:.:.  .:: :                                         
NP_061 -APEPASAPVPSPPSPPCGPGLWRPW                                  
       150       160       170                                     

>>NP_036390 (OMIM: 602953) hairy/enhancer-of-split relat  (304 aa)
 initn: 388 init1: 151 opt: 351  Z-score: 190.6  bits: 43.2 E(85289): 0.0007
Smith-Waterman score: 351; 33.1% identity (58.1% similar) in 296 aa overlap (6-278:21-297)

                              10        20        30          40   
pF1KB7                MPADIMEKNSSSPVAATPASVNTTPDKPKTASE--HRKSSKPIME
                           .::.:..  .   .....   .: :.:.   ::  . :.:
NP_036 MKRAHPEYSSSDSELDETIEVEKESADENGNLSSALGSM--SPTTSSQILARKRRRGIIE
               10        20        30          40        50        

            50        60        70        80        90       100   
pF1KB7 KRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTD
       :::: :::.:::.:. :. .:..:..:  .:::::.::.::: ::. :. :   . ... 
NP_036 KRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTAGGKGYFDAH
       60        70        80          90       100       110      

           110       120       130         140       150       160 
pF1KB7 PSVLGKYRAGFSECMNEVTRFLSTCEGVNTE--VRTRLLGHLANCMTQINAMTYPGQPHP
         ..     :: ::. ::.:.::  ::...   .:.::..:: :  .: .: .  :  : 
NP_036 ALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAAS--GA-HA
        120       130       140       150       160         170    

              170       180       190             200       210    
pF1KB7 AL-QAPPPPPPGPGGPQHAPFAPPPPLVPIPGG------AAPPPGGAPCKLGSQAGEAAK
       .: . :     :     : :    : :.:  :       :.:       .:::   ::  
NP_036 GLGHIPWGTVFG-----HHPHIAHPLLLPQNGHGNAGTTASPTEPHHQGRLGSAHPEAPA
           180            190       200       210       220        

          220       230         240       250               260    
pF1KB7 VFGGFQVVPAPDGQFAFLIP--NGAFAHSGPVIPVYTSNSGT--SVG------PNAVSPS
       . .     : :.:... ..:  ..:   : :..   .: :.   : :      :::.:::
NP_036 LRA-----P-PSGSLGPVLPVVTSASKLSPPLLSSVASLSAFPFSFGSFHLLSPNALSPS
      230             240       250       260       270       280  

          270         280     
pF1KB7 SGPSLTAD--SMWRPWRN     
       . :. .:.  . .:::       
NP_036 A-PTQAANLGKPYRPWGTEIGAF
             290       300    

>>NP_001035798 (OMIM: 602953) hairy/enhancer-of-split re  (308 aa)
 initn: 408 init1: 151 opt: 343  Z-score: 186.9  bits: 42.6 E(85289): 0.0011
Smith-Waterman score: 343; 32.6% identity (57.7% similar) in 298 aa overlap (6-278:21-301)

                              10        20        30          40   
pF1KB7                MPADIMEKNSSSPVAATPASVNTTPDKPKTASE--HRKSSKPIME
                           .::.:..  .   .....   .: :.:.   ::  . :.:
NP_001 MKRAHPEYSSSDSELDETIEVEKESADENGNLSSALGSM--SPTTSSQILARKRRRGIIE
               10        20        30          40        50        

            50        60        70          80        90       100 
pF1KB7 KRRRARINESLSQLKTLILDALKKDSSRH--SKLEKADILEMTVKHLRNLQRAQMTAALS
       :::: :::.:::.:. :. .:..:.  ..  .:::::.::.::: ::. :. :   . ..
NP_001 KRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKMLHTAGGKGYFD
       60        70        80        90       100       110        

             110       120       130         140       150         
pF1KB7 TDPSVLGKYRAGFSECMNEVTRFLSTCEGVNTE--VRTRLLGHLANCMTQINAMTYPGQP
       .   ..     :: ::. ::.:.::  ::...   .:.::..:: :  .: .: .  :  
NP_001 AHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAAS--GA-
      120       130       140       150       160       170        

     160        170       180       190             200       210  
pF1KB7 HPAL-QAPPPPPPGPGGPQHAPFAPPPPLVPIPGG------AAPPPGGAPCKLGSQAGEA
       : .: . :     :     : :    : :.:  :       :.:       .:::   ::
NP_001 HAGLGHIPWGTVFG-----HHPHIAHPLLLPQNGHGNAGTTASPTEPHHQGRLGSAHPEA
         180            190       200       210       220       230

            220       230         240       250               260  
pF1KB7 AKVFGGFQVVPAPDGQFAFLIP--NGAFAHSGPVIPVYTSNSGT--SVG------PNAVS
         . .     : :.:... ..:  ..:   : :..   .: :.   : :      :::.:
NP_001 PALRA-----P-PSGSLGPVLPVVTSASKLSPPLLSSVASLSAFPFSFGSFHLLSPNALS
                    240       250       260       270       280    

            270         280     
pF1KB7 PSSGPSLTAD--SMWRPWRN     
       ::. :. .:.  . .:::       
NP_001 PSA-PTQAANLGKPYRPWGTEIGAF
           290       300        

>>NP_061115 (OMIM: 610331) transcription cofactor HES-6   (224 aa)
 initn: 373 init1: 226 opt: 335  Z-score: 184.9  bits: 41.7 E(85289): 0.0015
Smith-Waterman score: 335; 34.3% identity (61.1% similar) in 198 aa overlap (35-229:26-211)

           10        20        30        40        50        60    
pF1KB7 IMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDA
                                     ::. ::..::.:::::::::..:. :.  :
NP_061      MAPPAAPGRDRVGREDEDGWETRGDRKARKPLVEKKRRARINESLQELRLLLAGA
                    10        20        30        40        50     

           70        80        90       100       110       120    
pF1KB7 LKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRF
              ..:::.:..::.::...... :..     . .  .  .. ::. .::.::  :
NP_061 -----EVQAKLENAEVLELTVRRVQGVLRGRAREREQLQAEASERFAAGYIQCMHEVHTF
               60        70        80        90       100       110

          130       140       150       160       170       180    
pF1KB7 LSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGGPQHAPFAPP
       .:::..... : ..::.:: . :   .. ..      :: .::  :   : :  :  :: 
NP_061 VSTCQAIDATVAAELLNHLLESMPLREGSSFQDLLGDALAGPPRAPGRSGWP--AGGAPG
              120       130       140       150       160          

          190       200       210          220       230       240 
pF1KB7 PPLVPIPGGAAPPPGGAPCKLGSQAGEAAKVFG---GFQVVPAPDGQFAFLIPNGAFAHS
        : .: :    : ::   :.   .: ::    .   : ..:::  :..            
NP_061 SP-IPSP----PGPGDDLCSDLEEAPEAELSQAPAEGPDLVPAALGSLTTAQIARSVWRP
      170            180       190       200       210       220   

             250       260       270       280
pF1KB7 GPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN
                                              
NP_061 W                                      
                                              

>>NP_001136325 (OMIM: 610331) transcription cofactor HES  (222 aa)
 initn: 267 init1: 225 opt: 334  Z-score: 184.5  bits: 41.6 E(85289): 0.0016
Smith-Waterman score: 334; 34.3% identity (61.1% similar) in 198 aa overlap (35-229:26-209)

           10        20        30        40        50        60    
pF1KB7 IMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDA
                                     ::. ::..::.:::::::::..:. :.  :
NP_001      MAPPAAPGRDRVGREDEDGWETRGDRKARKPLVEKKRRARINESLQELRLLLAGA
                    10        20        30        40        50     

           70        80        90       100       110       120    
pF1KB7 LKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRF
              ..:::.:..::.::...... :..     . .  .  .. ::. .::.::  :
NP_001 -------EAKLENAEVLELTVRRVQGVLRGRAREREQLQAEASERFAAGYIQCMHEVHTF
                 60        70        80        90       100        

          130       140       150       160       170       180    
pF1KB7 LSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGGPQHAPFAPP
       .:::..... : ..::.:: . :   .. ..      :: .::  :   : :  :  :: 
NP_001 VSTCQAIDATVAAELLNHLLESMPLREGSSFQDLLGDALAGPPRAPGRSGWP--AGGAPG
      110       120       130       140       150       160        

          190       200       210          220       230       240 
pF1KB7 PPLVPIPGGAAPPPGGAPCKLGSQAGEAAKVFG---GFQVVPAPDGQFAFLIPNGAFAHS
        : .: :    : ::   :.   .: ::    .   : ..:::  :..            
NP_001 SP-IPSP----PGPGDDLCSDLEEAPEAELSQAPAEGPDLVPAALGSLTTAQIARSVWRP
         170           180       190       200       210       220 

             250       260       270       280
pF1KB7 GPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN
                                              
NP_001 W                                      
                                              

>>NP_036391 (OMIM: 604674) hairy/enhancer-of-split relat  (337 aa)
 initn: 322 init1: 157 opt: 335  Z-score: 182.7  bits: 41.9 E(85289): 0.0019
Smith-Waterman score: 338; 32.5% identity (56.1% similar) in 305 aa overlap (7-271:23-319)

                               10        20        30          40  
pF1KB7                 MPADIMEKNSSSPVAATPASVNTTPDKPKTASE--HRKSSKPIM
                             :.: :.  ...   .:.    : :.:.   ::. . :.
NP_036 MKRPCEETTSESDMDETIDVGSENNYSGQSTSSVIRLNS----PTTTSQIMARKKRRGII
               10        20        30            40        50      

             50        60        70        80        90       100  
pF1KB7 EKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALST
       ::::: :::.:::.:. :.  :..:..:  .:::::.::.::: ::. :: .   . ...
NP_036 EKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLQATGGKGYFDA
         60        70        80          90       100       110    

            110       120       130         140         150        
pF1KB7 DPSVLGKYRAGFSECMNEVTRFLSTCEGVNTE--VRTRLLGHLANCMTQ--INAMT----
          ..  .  :: ::..::.:.::. ::...   .:.::..::..: ::    :::    
NP_036 HALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAAMTSSMA
          120       130       140       150       160       170    

             160          170       180            190             
pF1KB7 ---YPGQPH---PALQAPPPPPPGPGGPQHAPFAPPPPL-----VPIPGGAA--------
          .: .::    :..  :     :.:  ::  . :  :     ::   :.:        
NP_036 HHHHPLHPHHWAAAFHHLPAALLQPNG-LHASESTPCRLSTTSEVPPAHGSALLTATFAH
          180       190       200        210       220       230   

                200           210       220       230       240    
pF1KB7 -------PPPGG-APC--KLG-SQAGEAAKVFGGFQVVPAPDGQFAFLIPNGAFAHSGPV
              :  :. :::   :. :  . .: : ..  .. :   .:  :   :::    : 
NP_036 ADSALRMPSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFP-LSFAGAFPMLPPN
           240       250       260       270        280       290  

          250       260       270       280         
pF1KB7 IPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN         
         . .. . .   : .:: .:.:. :.                  
NP_036 AAAAVAAATAISPPLSVSATSSPQQTSSGTNNKPYRPWGTEVGAF
            300       310       320       330       




280 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 10:17:32 2016 done: Sat Nov  5 10:17:33 2016
 Total Scan time:  9.090 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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