Result of FASTA (omim) for
pFN21AB9820
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9820, 311 aa
1>>>pF1KB9820 311 - 311 aa - 311 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9826+/-0.000283; mu= 4.1386+/- 0.018
mean_var=155.0299+/-31.723, 0's: 0 Z-trim(122.8): 98 B-trim: 174 in 1/55
Lambda= 0.103007
statistics sampled from 41436 (41547) to 41436 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.817), E-opt: 0.2 (0.487), width: 16
Scan time: 8.430
The best scores are: opt bits E(85289)
NP_940853 (OMIM: 300949) forkhead box protein R2 [ ( 311) 2244 344.5 1.6e-94
NP_859072 (OMIM: 615755) forkhead box protein R1 [ ( 292) 1108 175.6 1e-43
XP_016873064 (OMIM: 615755) PREDICTED: forkhead bo ( 297) 1080 171.5 1.9e-42
XP_016873065 (OMIM: 615755) PREDICTED: forkhead bo ( 271) 683 112.5 1e-24
XP_011523664 (OMIM: 600838,601705) PREDICTED: fork ( 648) 307 56.8 1.4e-07
XP_016880717 (OMIM: 600838,601705) PREDICTED: fork ( 648) 307 56.8 1.4e-07
XP_011523661 (OMIM: 600838,601705) PREDICTED: fork ( 649) 307 56.8 1.4e-07
XP_011523660 (OMIM: 600838,601705) PREDICTED: fork ( 649) 307 56.8 1.4e-07
XP_005258103 (OMIM: 600838,601705) PREDICTED: fork ( 648) 296 55.2 4.2e-07
NP_003584 (OMIM: 600838,601705) forkhead box prote ( 648) 296 55.2 4.2e-07
XP_016880720 (OMIM: 600838,601705) PREDICTED: fork ( 384) 290 54.2 5.1e-07
XP_016880718 (OMIM: 600838,601705) PREDICTED: fork ( 567) 292 54.6 5.7e-07
XP_016880719 (OMIM: 600838,601705) PREDICTED: fork ( 485) 290 54.2 6.1e-07
XP_011523669 (OMIM: 600838,601705) PREDICTED: fork ( 462) 288 53.9 7.2e-07
XP_011523672 (OMIM: 600838,601705) PREDICTED: fork ( 436) 283 53.2 1.2e-06
XP_011523670 (OMIM: 600838,601705) PREDICTED: fork ( 436) 283 53.2 1.2e-06
XP_011523671 (OMIM: 600838,601705) PREDICTED: fork ( 436) 283 53.2 1.2e-06
XP_016874307 (OMIM: 609429) PREDICTED: forkhead bo ( 474) 277 52.3 2.3e-06
NP_998761 (OMIM: 609429) forkhead box protein N4 [ ( 517) 277 52.3 2.5e-06
XP_011536224 (OMIM: 609429) PREDICTED: forkhead bo ( 518) 277 52.3 2.5e-06
XP_011536225 (OMIM: 609429) PREDICTED: forkhead bo ( 314) 265 50.4 5.6e-06
XP_016874308 (OMIM: 609429) PREDICTED: forkhead bo ( 377) 265 50.4 6.6e-06
XP_005264340 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
NP_002149 (OMIM: 143089) forkhead box protein N2 [ ( 431) 221 43.9 0.00068
XP_006712064 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
XP_005264339 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
XP_016859448 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
XP_011531110 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
XP_016859447 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
XP_016859446 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
XP_016859445 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
XP_006712065 (OMIM: 143089) PREDICTED: forkhead bo ( 431) 221 43.9 0.00068
NP_001129121 (OMIM: 612351) forkhead box protein I ( 420) 220 43.8 0.00074
NP_036320 (OMIM: 274600,600791,601093) forkhead bo ( 378) 206 41.7 0.0029
NP_005188 (OMIM: 602628) forkhead box protein N3 i ( 468) 203 41.3 0.0046
NP_001078940 (OMIM: 602628) forkhead box protein N ( 490) 203 41.3 0.0048
NP_658982 (OMIM: 274600,600791,601093) forkhead bo ( 283) 198 40.4 0.0051
>>NP_940853 (OMIM: 300949) forkhead box protein R2 [Homo (311 aa)
initn: 2244 init1: 2244 opt: 2244 Z-score: 1817.7 bits: 344.5 E(85289): 1.6e-94
Smith-Waterman score: 2244; 99.7% identity (100.0% similar) in 311 aa overlap (1-311:1-311)
10 20 30 40 50 60
pF1KB9 MDLKLKDCEFWYSLHGQVPGLLDWDMRNELFLPCTTDQCSLAEQILAKYRVGVMKPPEMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_940 MDLKLKDCEFWYSLHGQVPGLLDWDMRNELFLPCTTDQCSLAEQILAKYRVGVMKPPEMP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 QKRRPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPSGKEDLTNISPFPQPPQKDEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_940 QKRRPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPSGKEDLTNISPFPQPPQKDEGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 NCSEDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAEEPDDNSLQSPEMKCYQSQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_940 NCSEDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAEEPDDNSLQSPEMKCYQSQKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 WQINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAPDGWKSTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_940 WQINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAPDGWKSTI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 HYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRERIQECMS
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
NP_940 HYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRVLAFAQRERIQECMS
250 260 270 280 290 300
310
pF1KB9 QPELLTSLFDL
:::::::::::
NP_940 QPELLTSLFDL
310
>>NP_859072 (OMIM: 615755) forkhead box protein R1 [Homo (292 aa)
initn: 1116 init1: 600 opt: 1108 Z-score: 905.8 bits: 175.6 E(85289): 1e-43
Smith-Waterman score: 1108; 57.2% identity (78.1% similar) in 292 aa overlap (26-311:1-292)
10 20 30 40 50 60
pF1KB9 MDLKLKDCEFWYSLHGQVPGLLDWDMRNELFLPCTTDQCSLAEQILAKYRVGVMKPPEMP
: ::::: ::.. :::: ::.:.. ..:::..:
NP_859 MGNELFLAFTTSHLPLAEQKLARYKLRIVKPPKLP
10 20 30
70 80 90 100 110 120
pF1KB9 QKRRPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPSGKEDLTNISPFPQPPQKDEGS
...:.:: ::: ::::::::.:::. : :. :. .::::. : :::::.: .
NP_859 LEKKPNPDKDGPDYEPNLWMWVNPNIVYPPGKLEVSGRRKREDLTSTLPSSQPPQKEEDA
40 50 60 70 80 90
130 140 150 160 170
pF1KB9 NCSEDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEE-AEEPDDNS---LQSPEMKC-Y
.::: :::: .:::..:: .:. ::: .:::::: ::. .:.: : ::. .
NP_859 SCSEAAGVESLSQSSSKRSPPRKRFAFSPSTWELTEEEEAEDQEDSSSMALPSPHKRAPL
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 QSQKLWQINNQE-KSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAPD
::..: : ..: . :.::::: :::::::::. :::.::.::.:::.::::: :::.
NP_859 QSRRLRQASSQAGRLWSRPPLNYFHLIALALRNSSPCGLNVQQIYSFTRKHFPFFRTAPE
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB9 GWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRER
:::.:...:::: ::::::: :.. ..::::::::::.:::::: ::.:::: .. :
NP_859 GWKNTVRHNLCFRDSFEKVPVSMQGGASTRPRSCLWKLTEEGHRRFAEEARALASTRLES
220 230 240 250 260 270
300 310
pF1KB9 IQECMSQPELLTSLFDL
::.:::::... ::::
NP_859 IQQCMSQPDVMPFLFDL
280 290
>>XP_016873064 (OMIM: 615755) PREDICTED: forkhead box pr (297 aa)
initn: 1088 init1: 572 opt: 1080 Z-score: 883.2 bits: 171.5 E(85289): 1.9e-42
Smith-Waterman score: 1080; 57.6% identity (78.1% similar) in 283 aa overlap (26-302:1-283)
10 20 30 40 50 60
pF1KB9 MDLKLKDCEFWYSLHGQVPGLLDWDMRNELFLPCTTDQCSLAEQILAKYRVGVMKPPEMP
: ::::: ::.. :::: ::.:.. ..:::..:
XP_016 MGNELFLAFTTSHLPLAEQKLARYKLRIVKPPKLP
10 20 30
70 80 90 100 110 120
pF1KB9 QKRRPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPSGKEDLTNISPFPQPPQKDEGS
...:.:: ::: ::::::::.:::. : :. :. .::::. : :::::.: .
XP_016 LEKKPNPDKDGPDYEPNLWMWVNPNIVYPPGKLEVSGRRKREDLTSTLPSSQPPQKEEDA
40 50 60 70 80 90
130 140 150 160 170
pF1KB9 NCSEDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEE-AEEPDDNS---LQSPEMKC-Y
.::: :::: .:::..:: .:. ::: .:::::: ::. .:.: : ::. .
XP_016 SCSEAAGVESLSQSSSKRSPPRKRFAFSPSTWELTEEEEAEDQEDSSSMALPSPHKRAPL
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 QSQKLWQINNQE-KSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAPD
::..: : ..: . :.::::: :::::::::. :::.::.::.:::.::::: :::.
XP_016 QSRRLRQASSQAGRLWSRPPLNYFHLIALALRNSSPCGLNVQQIYSFTRKHFPFFRTAPE
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB9 GWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRER
:::.:...:::: ::::::: :.. ..::::::::::.:::::: ::.:::: .. :
XP_016 GWKNTVRHNLCFRDSFEKVPVSMQGGASTRPRSCLWKLTEEGHRRFAEEARALASTRLES
220 230 240 250 260 270
300 310
pF1KB9 IQECMSQPELLTSLFDL
::.:::::
XP_016 IQQCMSQPGVKTCCAWAQGEET
280 290
>>XP_016873065 (OMIM: 615755) PREDICTED: forkhead box pr (271 aa)
initn: 925 init1: 490 opt: 683 Z-score: 564.9 bits: 112.5 E(85289): 1e-24
Smith-Waterman score: 869; 51.2% identity (69.6% similar) in 283 aa overlap (26-302:1-257)
10 20 30 40 50 60
pF1KB9 MDLKLKDCEFWYSLHGQVPGLLDWDMRNELFLPCTTDQCSLAEQILAKYRVGVMKPPEMP
: ::::: ::.. :::: ::.:.. ..:::..:
XP_016 MGNELFLAFTTSHLPLAEQKLARYKLRIVKPPKLP
10 20 30
70 80 90 100 110 120
pF1KB9 QKRRPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPSGKEDLTNISPFPQPPQKDEGS
...:.:: ::: ::::::::.:::. : :. :. .::::. : :::::.: .
XP_016 LEKKPNPDKDGPDYEPNLWMWVNPNIVYPPGKLEVSGRRKREDLTSTLPSSQPPQKEEDA
40 50 60 70 80 90
130 140 150 160 170
pF1KB9 NCSEDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEE-AEEPDDNS---LQSPEMKC-Y
.::: :::: .:::..:: .:. ::: .:::::: ::. .:.: : ::. .
XP_016 SCSEAAGVESLSQSSSKRSPPRKRFAFSPSTWELTEEEEAEDQEDSSSMALPSPHKRAPL
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 QSQKLWQINNQE-KSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAPD
::..: : ..: . :.::::: :::::::::. :::.::.::.:::
XP_016 QSRRLRQASSQAGRLWSRPPLNYFHLIALALRNSSPCGLNVQQIYSFTR-----------
160 170 180 190 200
240 250 260 270 280 290
pF1KB9 GWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRER
::::: :.. ..::::::::::.:::::: ::.:::: .. :
XP_016 ---------------FEKVPVSMQGGASTRPRSCLWKLTEEGHRRFAEEARALASTRLES
210 220 230 240
300 310
pF1KB9 IQECMSQPELLTSLFDL
::.:::::
XP_016 IQQCMSQPGVKTCCAWAQGEET
250 260 270
>>XP_011523664 (OMIM: 600838,601705) PREDICTED: forkhead (648 aa)
initn: 296 init1: 215 opt: 307 Z-score: 257.3 bits: 56.8 E(85289): 1.4e-07
Smith-Waterman score: 307; 31.6% identity (56.0% similar) in 225 aa overlap (94-308:168-384)
70 80 90 100 110
pF1KB9 RPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPS-GKEDLTNISPFPQP---PQKDEG
:: :. . : : :.:. :: .:
XP_011 ETTLALKGHSFKTPGPLEAFEEIPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLQG
140 150 160 170 180 190
120 130 140 150 160 170
pF1KB9 SNCS-EDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAEEPDDNSLQSPEMKC--YQ
:. . . :.:: . : :::.. : :. : .: : . ::
XP_011 SEVKVKPPVLESGAGMFCYQPPLQHMYCSSQPPFH-----QYSPGGGSYPIPYLGSSHYQ
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB9 SQKLW---QINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAP
:.. . .... . .: . : :: .::.:. .: :.::::: .:::.: :::
XP_011 YQRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAP
260 270 280 290 300 310
240 250 260 270 280 290
pF1KB9 DGWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRE
::::.....:: . :::: . :. ...: ..::: :. .. :: . .
XP_011 DGWKNSVRHNLSLNKCFEKVEN--KSGSSSR-KGCLWALNPAKIDKMQEELQKWKRKDPI
320 330 340 350 360
300 310
pF1KB9 RIQECMSQPELLTSLFDL
... :..:: : ::
XP_011 AVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPA
370 380 390 400 410 420
>>XP_016880717 (OMIM: 600838,601705) PREDICTED: forkhead (648 aa)
initn: 296 init1: 215 opt: 307 Z-score: 257.3 bits: 56.8 E(85289): 1.4e-07
Smith-Waterman score: 307; 31.6% identity (56.0% similar) in 225 aa overlap (94-308:168-384)
70 80 90 100 110
pF1KB9 RPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPS-GKEDLTNISPFPQP---PQKDEG
:: :. . : : :.:. :: .:
XP_016 ETTLALKGHSFKTPGPLEAFEEIPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLQG
140 150 160 170 180 190
120 130 140 150 160 170
pF1KB9 SNCS-EDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAEEPDDNSLQSPEMKC--YQ
:. . . :.:: . : :::.. : :. : .: : . ::
XP_016 SEVKVKPPVLESGAGMFCYQPPLQHMYCSSQPPFH-----QYSPGGGSYPIPYLGSSHYQ
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB9 SQKLW---QINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAP
:.. . .... . .: . : :: .::.:. .: :.::::: .:::.: :::
XP_016 YQRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAP
260 270 280 290 300 310
240 250 260 270 280 290
pF1KB9 DGWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRE
::::.....:: . :::: . :. ...: ..::: :. .. :: . .
XP_016 DGWKNSVRHNLSLNKCFEKVEN--KSGSSSR-KGCLWALNPAKIDKMQEELQKWKRKDPI
320 330 340 350 360
300 310
pF1KB9 RIQECMSQPELLTSLFDL
... :..:: : ::
XP_016 AVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPA
370 380 390 400 410 420
>>XP_011523661 (OMIM: 600838,601705) PREDICTED: forkhead (649 aa)
initn: 292 init1: 215 opt: 307 Z-score: 257.3 bits: 56.8 E(85289): 1.4e-07
Smith-Waterman score: 307; 31.6% identity (56.0% similar) in 225 aa overlap (94-308:169-385)
70 80 90 100 110
pF1KB9 RPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPS-GKEDLTNISPFPQP---PQKDEG
:: :. . : : :.:. :: .:
XP_011 ETTLALKGHSFKTPGPLEAFEEIPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLQG
140 150 160 170 180 190
120 130 140 150 160 170
pF1KB9 SNCS-EDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAEEPDDNSLQSPEMKC--YQ
:. . . :.:: . : :::.. : :. : .: : . ::
XP_011 SEVKVKPPVLESGAGMFCYQPPLQHMYCSSQPPFH-----QYSPGGGSYPIPYLGSSHYQ
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB9 SQKLW---QINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAP
:.. . .... . .: . : :: .::.:. .: :.::::: .:::.: :::
XP_011 YQRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAP
260 270 280 290 300 310
240 250 260 270 280 290
pF1KB9 DGWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRE
::::.....:: . :::: . :. ...: ..::: :. .. :: . .
XP_011 DGWKNSVRHNLSLNKCFEKVEN--KSGSSSR-KGCLWALNPAKIDKMQEELQKWKRKDPI
320 330 340 350 360 370
300 310
pF1KB9 RIQECMSQPELLTSLFDL
... :..:: : ::
XP_011 AVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPA
380 390 400 410 420 430
>>XP_011523660 (OMIM: 600838,601705) PREDICTED: forkhead (649 aa)
initn: 292 init1: 215 opt: 307 Z-score: 257.3 bits: 56.8 E(85289): 1.4e-07
Smith-Waterman score: 307; 31.6% identity (56.0% similar) in 225 aa overlap (94-308:169-385)
70 80 90 100 110
pF1KB9 RPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPS-GKEDLTNISPFPQP---PQKDEG
:: :. . : : :.:. :: .:
XP_011 ETTLALKGHSFKTPGPLEAFEEIPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLQG
140 150 160 170 180 190
120 130 140 150 160 170
pF1KB9 SNCS-EDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAEEPDDNSLQSPEMKC--YQ
:. . . :.:: . : :::.. : :. : .: : . ::
XP_011 SEVKVKPPVLESGAGMFCYQPPLQHMYCSSQPPFH-----QYSPGGGSYPIPYLGSSHYQ
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB9 SQKLW---QINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAP
:.. . .... . .: . : :: .::.:. .: :.::::: .:::.: :::
XP_011 YQRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAP
260 270 280 290 300 310
240 250 260 270 280 290
pF1KB9 DGWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRE
::::.....:: . :::: . :. ...: ..::: :. .. :: . .
XP_011 DGWKNSVRHNLSLNKCFEKVEN--KSGSSSR-KGCLWALNPAKIDKMQEELQKWKRKDPI
320 330 340 350 360 370
300 310
pF1KB9 RIQECMSQPELLTSLFDL
... :..:: : ::
XP_011 AVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPA
380 390 400 410 420 430
>>XP_005258103 (OMIM: 600838,601705) PREDICTED: forkhead (648 aa)
initn: 296 init1: 219 opt: 296 Z-score: 248.5 bits: 55.2 E(85289): 4.2e-07
Smith-Waterman score: 296; 30.8% identity (55.8% similar) in 224 aa overlap (94-308:169-384)
70 80 90 100 110 120
pF1KB9 RPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPS-GKEDLTNISPFPQPPQKDE--GS
:: :. . : : :.:. . . ::
XP_005 ETTLALKGHSFKTPGPLEAFEEIPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLGS
140 150 160 170 180 190
130 140 150 160 170
pF1KB9 NCS-EDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAEEPDDNSLQSPEMKC--YQS
. . . :.:: . : :::.. : :. : .: : . ::
XP_005 EVKVKPPVLESGAGMFCYQPPLQHMYCSSQPPFH-----QYSPGGGSYPIPYLGSSHYQY
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB9 QKLW---QINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAPD
:.. . .... . .: . : :: .::.:. .: :.::::: .:::.: ::::
XP_005 QRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPD
260 270 280 290 300 310
240 250 260 270 280 290
pF1KB9 GWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRER
:::.....:: . :::: . :. ...: ..::: :. .. :: . .
XP_005 GWKNSVRHNLSLNKCFEKVEN--KSGSSSR-KGCLWALNPAKIDKMQEELQKWKRKDPIA
320 330 340 350 360 370
300 310
pF1KB9 IQECMSQPELLTSLFDL
... :..:: : ::
XP_005 VRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPAP
380 390 400 410 420 430
>>NP_003584 (OMIM: 600838,601705) forkhead box protein N (648 aa)
initn: 296 init1: 219 opt: 296 Z-score: 248.5 bits: 55.2 E(85289): 4.2e-07
Smith-Waterman score: 296; 30.8% identity (55.8% similar) in 224 aa overlap (94-308:169-384)
70 80 90 100 110 120
pF1KB9 RPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPS-GKEDLTNISPFPQPPQKDE--GS
:: :. . : : :.:. . . ::
NP_003 ETTLALKGHSFKTPGPLEAFEEIPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLGS
140 150 160 170 180 190
130 140 150 160 170
pF1KB9 NCS-EDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAEEPDDNSLQSPEMKC--YQS
. . . :.:: . : :::.. : :. : .: : . ::
NP_003 EVKVKPPVLESGAGMFCYQPPLQHMYCSSQPPFH-----QYSPGGGSYPIPYLGSSHYQY
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB9 QKLW---QINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHFPFFWTAPD
:.. . .... . .: . : :: .::.:. .: :.::::: .:::.: ::::
NP_003 QRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPD
260 270 280 290 300 310
240 250 260 270 280 290
pF1KB9 GWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEGHRRFWEETRALAFAQRER
:::.....:: . :::: . :. ...: ..::: :. .. :: . .
NP_003 GWKNSVRHNLSLNKCFEKVEN--KSGSSSR-KGCLWALNPAKIDKMQEELQKWKRKDPIA
320 330 340 350 360 370
300 310
pF1KB9 IQECMSQPELLTSLFDL
... :..:: : ::
NP_003 VRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPAP
380 390 400 410 420 430
311 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:26:59 2016 done: Fri Nov 4 19:27:00 2016
Total Scan time: 8.430 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]