FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6661, 424 aa 1>>>pF1KB6661 424 - 424 aa - 424 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7609+/-0.000707; mu= 17.0850+/- 0.043 mean_var=93.1438+/-18.789, 0's: 0 Z-trim(112.1): 10 B-trim: 0 in 0/51 Lambda= 0.132891 statistics sampled from 12875 (12880) to 12875 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.396), width: 16 Scan time: 3.170 The best scores are: opt bits E(32554) CCDS14134.2 GPR143 gene_id:4935|Hs108|chrX ( 404) 2737 534.4 7.5e-152 >>CCDS14134.2 GPR143 gene_id:4935|Hs108|chrX (404 aa) initn: 2737 init1: 2737 opt: 2737 Z-score: 2839.6 bits: 534.4 E(32554): 7.5e-152 Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 404 aa overlap (21-424:1-404) 10 20 30 40 50 60 pF1KB6 MTQAGRRGPGTPEPRPRTQPMASPRLGTFCCPTRDAATQLVLSFQPRAFHALCLGSGGLR :::::::::::::::::::::::::::::::::::::::: CCDS14 MASPRLGTFCCPTRDAATQLVLSFQPRAFHALCLGSGGLR 10 20 30 40 70 80 90 100 110 120 pF1KB6 LALGLLQLLPGRRPAGPGSPATSPPASVRILRAAAACDLLGCLGMVIRSTVWLGFPNFVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LALGLLQLLPGRRPAGPGSPATSPPASVRILRAAAACDLLGCLGMVIRSTVWLGFPNFVD 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB6 SVSDMNHTEIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILLYHIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SVSDMNHTEIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILLYHIM 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB6 AWGLATLLCVEGAAMLYYPSVSRCERGLDHAIPHYVTMYLPLLLVLVANPILFQKTVTAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 AWGLATLLCVEGAAMLYYPSVSRCERGLDHAIPHYVTMYLPLLLVLVANPILFQKTVTAV 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB6 ASLLKGRQGIYTENERRMGAVIKIRFFKIMLVLIICWLSNIINESLLFYLEMQTDINGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 ASLLKGRQGIYTENERRMGAVIKIRFFKIMLVLIICWLSNIINESLLFYLEMQTDINGGS 230 240 250 260 270 280 310 320 330 340 350 360 pF1KB6 LKPVRTAAKTTWFIMGILNPAQGFLLSLAFYGWTGCSLGFQSPRKEIQWESLTTSAAEGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LKPVRTAAKTTWFIMGILNPAQGFLLSLAFYGWTGCSLGFQSPRKEIQWESLTTSAAEGA 290 300 310 320 330 340 370 380 390 400 410 420 pF1KB6 HPSPLMPHENPASGKVSQVGGQTSDEALSMLSEGSDASTIEIHTASESCNKNEGDPALPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 HPSPLMPHENPASGKVSQVGGQTSDEALSMLSEGSDASTIEIHTASESCNKNEGDPALPT 350 360 370 380 390 400 pF1KB6 HGDL :::: CCDS14 HGDL 424 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 14:32:42 2016 done: Mon Nov 7 14:32:43 2016 Total Scan time: 3.170 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]