(Linear) (Six-base) MAPSORT of: KIEE9540.seq Check: 6969 from: 1 to: 1290 KIEE9540.orf With 182 enzymes: SgfI * December 27, 2011 16:41 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 1268 1290 Size: 1268 22 AccI GT'mk_AC Cuts at: 0 644 923 1290 Size: 644 279 367 Fragments arranged by size: 644 367 279 AflIII A'CryG_T Cuts at: 0 236 1290 Size: 236 1054 AleI CACnn'nnGTG Cuts at: 0 301 400 652 1290 Size: 301 99 252 638 Fragments arranged by size: 638 301 252 99 ApaI G_GGCC'C Cuts at: 0 501 745 1165 1179 1290 Size: 501 244 420 14 111 Fragments arranged by size: 501 420 244 111 14 ApaLI G'TGCA_C Cuts at: 0 436 805 1290 Size: 436 369 485 Fragments arranged by size: 485 436 369 AvaI C'yCGr_G Cuts at: 0 622 738 751 1290 Size: 622 116 13 539 Fragments arranged by size: 622 539 116 13 BanI G'GyrC_C Cuts at: 0 678 1290 Size: 678 612 BanII G_rGCy'C Cuts at: 0 14 501 745 1165 1179 1290 Size: 14 487 244 420 14 111 Fragments arranged by size: 487 420 244 111 14 14 BbeI G_GCGC'C Cuts at: 0 682 1290 Size: 682 608 BbsI GAAGACnn'nnnn_ Cuts at: 0 1107 1290 Size: 1107 183 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 748 782 1290 Size: 748 34 508 Fragments arranged by size: 748 508 34 BfrBI ATG'CAT Cuts at: 0 222 1290 Size: 222 1068 BglI GCCn_nnn'nGGC Cuts at: 0 76 1095 1290 Size: 76 1019 195 Fragments arranged by size: 1019 195 76 BlpI GC'TnA_GC Cuts at: 0 892 1290 Size: 892 398 Bme1580I G_kGCm'C Cuts at: 0 440 501 745 809 1165 1179 1290 Size: 440 61 244 64 356 14 111 Fragments arranged by size: 440 356 244 111 64 61 14 BmrI ACTGGGnnnn_n' Cuts at: 0 329 1290 Size: 329 961 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1095 1290 Size: 1095 195 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 190 1290 Size: 190 1100 BsaHI Gr'CG_yC Cuts at: 0 575 679 1290 Size: 575 104 611 Fragments arranged by size: 611 575 104 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 87 568 775 1290 Size: 87 481 207 515 Fragments arranged by size: 515 481 207 87 BseYI C'CCAG_C Cuts at: 0 17 608 1132 1290 Size: 17 591 524 158 Fragments arranged by size: 591 524 158 17 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 385 892 1087 1290 Size: 385 507 195 203 Fragments arranged by size: 507 385 203 195 BsiEI CG_ry'CG Cuts at: 0 530 1191 1290 Size: 530 661 99 Fragments arranged by size: 661 530 99 BsiHKAI G_wGCw'C Cuts at: 0 206 440 560 659 809 1290 Size: 206 234 120 99 150 481 Fragments arranged by size: 481 234 206 150 120 99 Bsp1286I G_dGCh'C Cuts at: 0 14 206 440 501 560 659 745 809 Size: 14 192 234 61 59 99 86 64 Cuts at: 809 1165 1179 1290 Size: 356 14 111 Fragments arranged by size: 356 234 192 111 99 86 64 61 59 14 14 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 275 1268 1290 Size: 275 993 22 Fragments arranged by size: 993 275 22 BsrBI CCG'CTC Cuts at: 0 356 587 597 855 1086 1290 Size: 356 231 10 258 231 204 Fragments arranged by size: 356 258 231 231 204 10 BsrDI GCAATG_nn' Cuts at: 0 407 1290 Size: 407 883 BsrFI r'CCGG_y Cuts at: 0 212 1290 Size: 212 1078 BssHII G'CGCG_C Cuts at: 0 718 796 896 1290 Size: 718 78 100 394 Fragments arranged by size: 718 394 100 78 BstAPI GCAn_nnn'nTGC Cuts at: 0 284 728 1290 Size: 284 444 562 Fragments arranged by size: 562 444 284 BstEII G'GTnAC_C Cuts at: 0 915 1290 Size: 915 375 BstXI CCAn_nnnn'nTGG Cuts at: 0 303 414 1290 Size: 303 111 876 Fragments arranged by size: 876 303 111 BtgI C'CryG_G Cuts at: 0 1011 1224 1290 Size: 1011 213 66 Fragments arranged by size: 1011 213 66 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 468 699 767 1290 Size: 468 231 68 523 Fragments arranged by size: 523 468 231 68 BtsI GCAGTG_nn' Cuts at: 0 1176 1290 Size: 1176 114 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 282 317 1290 Size: 282 35 973 Fragments arranged by size: 973 282 35 DraIII CAC_nnn'GTG Cuts at: 0 323 1290 Size: 323 967 EaeI y'GGCC_r Cuts at: 0 128 404 527 1188 1290 Size: 128 276 123 661 102 Fragments arranged by size: 661 276 128 123 102 EagI C'GGCC_G Cuts at: 0 527 1188 1290 Size: 527 661 102 Fragments arranged by size: 661 527 102 EarI CTCTTCn'nnn_ Cuts at: 0 664 1290 Size: 664 626 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 997 1290 Size: 997 293 EcoNI CCTnn'n_nnAGG Cuts at: 0 466 1290 Size: 466 824 EcoO109I rG'GnC_Cy Cuts at: 0 498 735 1162 1175 1176 1243 1290 Size: 498 237 427 13 1 67 47 Fragments arranged by size: 498 427 237 67 47 13 1 EcoRV GAT'ATC Cuts at: 0 1287 1290 Size: 1287 3 FspI TGC'GCA Cuts at: 0 637 1290 Size: 637 653 HaeII r_GCGC'y Cuts at: 0 475 508 682 691 829 865 971 1290 Size: 475 33 174 9 138 36 106 319 Fragments arranged by size: 475 319 174 138 106 36 33 9 KasI G'GCGC_C Cuts at: 0 678 1290 Size: 678 612 MscI TGG'CCA Cuts at: 0 406 1290 Size: 406 884 MslI CAynn'nnrTG Cuts at: 0 235 301 376 400 412 652 1290 Size: 235 66 75 24 12 240 638 Fragments arranged by size: 638 240 235 75 66 24 12 MspA1I CmG'CkG Cuts at: 0 428 684 906 1013 1200 1290 Size: 428 256 222 107 187 90 Fragments arranged by size: 428 256 222 187 107 90 NarI GG'CG_CC Cuts at: 0 679 1290 Size: 679 611 NsiI A_TGCA'T Cuts at: 0 224 1290 Size: 224 1066 NspI r_CATG'y Cuts at: 0 222 240 291 347 375 636 813 1290 Size: 222 18 51 56 28 261 177 477 Fragments arranged by size: 477 261 222 177 56 51 28 18 PasI CC'CwG_GG Cuts at: 0 1235 1290 Size: 1235 55 PciI A'CATG_T Cuts at: 0 236 1290 Size: 236 1054 PflMI CCAn_nnn'nTGG Cuts at: 0 567 1290 Size: 567 723 PspOMI G'GGCC_C Cuts at: 0 497 741 1161 1175 1290 Size: 497 244 420 14 115 Fragments arranged by size: 497 420 244 115 14 PvuII CAG'CTG Cuts at: 0 906 1290 Size: 906 384 SacII CC_GC'GG Cuts at: 0 1014 1290 Size: 1014 276 SapI GCTCTTCn'nnn_ Cuts at: 0 664 1290 Size: 664 626 SexAI A'CCwGG_T Cuts at: 0 911 1290 Size: 911 379 SfoI GGC'GCC Cuts at: 0 680 1290 Size: 680 610 SmaI CCC'GGG Cuts at: 0 740 753 1290 Size: 740 13 537 Fragments arranged by size: 740 537 13 SmlI C'TyrA_G Cuts at: 0 205 1290 Size: 205 1085 SphI G_CATG'C Cuts at: 0 291 636 1290 Size: 291 345 654 Fragments arranged by size: 654 345 291 StuI AGG'CCT Cuts at: 0 616 1075 1290 Size: 616 459 215 Fragments arranged by size: 616 459 215 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 311 1290 Size: 311 979 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 138 300 1290 Size: 138 162 990 Fragments arranged by size: 990 162 138 XmaI C'CCGG_G Cuts at: 0 738 751 1290 Size: 738 13 539 Fragments arranged by size: 738 539 13 Enzymes that do cut: AarI AccI AflIII AleI ApaI ApaLI AvaI BanI BanII BbeI BbsI BcgI BfrBI BglI BlpI Bme1580I BmrI BplI BpuEI BsaHI BseRI BseYI BsgI BsiEI BsiHKAI Bsp1286I BspMI BsrBI BsrDI BsrFI BssHII BstAPI BstEII BstXI BtgI BtgZI BtsI CspCI DraIII EaeI EagI EarI EciI EcoNI EcoO109I EcoRV FspI HaeII KasI MscI MslI MspA1I NarI NsiI NspI PasI PciI PflMI PspOMI PvuII SacII SapI SexAI SfoI SmaI SmlI SphI StuI TaqII XcmI XmaI Enzymes that do not cut: AatII Acc65I AclI AcuI AfeI AflII AgeI AhdI AlfI AloI AlwNI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbvCI BciVI BclI BglII BmgBI BmtI BpmI Bpu10I BsaI BsaAI BsaBI BsaWI BsaXI BsiWI BsmI BsmBI BspEI BspHI BsrGI BssSI BstBI BstYI BstZ17I Bsu36I ClaI DraI DrdI EcoICRI Eco57MI EcoRI FalI FseI FspAI Hin4I HincII HindIII HpaI KpnI MfeI MluI MmeI NaeI NcoI NdeI NgoMIV NheI NotI NruI PacI PfoI PmeI PmlI PpiI PpuMI PshAI PsiI PspXI PsrI PstI PvuI RsrII SacI SalI SanDI SbfI ScaI SfcI SfiI SgfI SgrAI SnaBI SpeI SrfI SspI StyI SwaI TatI TstI Tth111I XbaI XhoI XmnI ZraI