(Linear) (Six-base) MAPSORT of: KIBB9572.seq Check: 2788 from: 1 to: 2364 KIBB9572.orf With 182 enzymes: SgfI * March 3, 2008 11:10 .. AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 191 212 335 780 824 2007 2364 Size: 191 21 123 445 44 1183 357 Fragments arranged by size: 1183 445 357 191 123 44 21 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 562 2364 Size: 562 1802 AlwNI CAG_nnn'CTG Cuts at: 0 24 259 631 1956 1980 2145 2364 Size: 24 235 372 1325 24 165 219 Fragments arranged by size: 1325 372 235 219 165 24 24 ApaI G_GGCC'C Cuts at: 0 104 2286 2364 Size: 104 2182 78 Fragments arranged by size: 2182 104 78 ApoI r'AATT_y Cuts at: 0 399 434 1408 2364 Size: 399 35 974 956 Fragments arranged by size: 974 956 399 35 AvaI C'yCGr_G Cuts at: 0 103 115 613 1484 2364 Size: 103 12 498 871 880 Fragments arranged by size: 880 871 498 103 12 BamHI G'GATC_C Cuts at: 0 1278 2364 Size: 1278 1086 BanI G'GyrC_C Cuts at: 0 1594 2364 Size: 1594 770 BanII G_rGCy'C Cuts at: 0 104 946 1240 1723 2286 2364 Size: 104 842 294 483 563 78 Fragments arranged by size: 842 563 483 294 104 78 BbsI GAAGACnn'nnnn_ Cuts at: 0 1649 2364 Size: 1649 715 BbvCI CC'TCA_GC Cuts at: 0 1741 2364 Size: 1741 623 BfrBI ATG'CAT Cuts at: 0 1477 2364 Size: 1477 887 Bme1580I G_kGCm'C Cuts at: 0 104 671 769 2286 2364 Size: 104 567 98 1517 78 Fragments arranged by size: 1517 567 104 98 78 BmgBI CAC'GTC Cuts at: 0 53 1571 1625 2364 Size: 53 1518 54 739 Fragments arranged by size: 1518 739 54 53 BmrI ACTGGGnnnn_n' Cuts at: 0 1042 1102 2364 Size: 1042 60 1262 Fragments arranged by size: 1262 1042 60 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 965 2246 2364 Size: 965 1281 118 Fragments arranged by size: 1281 965 118 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 556 1690 2364 Size: 556 1134 674 Fragments arranged by size: 1134 674 556 Bpu10I CC'TnA_GC Cuts at: 0 1741 2096 2195 2364 Size: 1741 355 99 169 Fragments arranged by size: 1741 355 169 99 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 171 937 979 2364 Size: 171 766 42 1385 Fragments arranged by size: 1385 766 171 42 BsaI GGTCTCn'nnnn_ Cuts at: 0 133 1831 2364 Size: 133 1698 533 Fragments arranged by size: 1698 533 133 BsaHI Gr'CG_yC Cuts at: 0 566 2364 Size: 566 1798 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 1032 1062 2364 Size: 1032 30 1302 Fragments arranged by size: 1302 1032 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 133 136 746 946 954 1567 2140 2364 Size: 133 3 610 200 8 613 573 224 Fragments arranged by size: 613 610 573 224 200 133 8 3 BseYI C'CCAG_C Cuts at: 0 670 924 1174 2349 2364 Size: 670 254 250 1175 15 Fragments arranged by size: 1175 670 254 250 15 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 55 2246 2364 Size: 55 2191 118 Fragments arranged by size: 2191 118 55 BsiHKAI G_wGCw'C Cuts at: 0 946 1769 2097 2364 Size: 946 823 328 267 Fragments arranged by size: 946 823 328 267 BsmBI CGTCTCn'nnnn_ Cuts at: 0 1112 1615 2364 Size: 1112 503 749 Fragments arranged by size: 1112 749 503 Bsp1286I G_dGCh'C Cuts at: 0 104 671 769 946 1240 1723 1769 2097 Size: 104 567 98 177 294 483 46 328 Cuts at: 2097 2286 2364 Size: 189 78 Fragments arranged by size: 567 483 328 294 189 177 104 98 78 46 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1075 2364 Size: 1075 1289 BsrFI r'CCGG_y Cuts at: 0 79 2364 Size: 79 2285 BssSI C'ACGA_G Cuts at: 0 1115 2364 Size: 1115 1249 BstBI TT'CG_AA Cuts at: 0 2202 2364 Size: 2202 162 BstEII G'GTnAC_C Cuts at: 0 606 2364 Size: 606 1758 BstYI r'GATC_y Cuts at: 0 20 1152 1278 1733 2364 Size: 20 1132 126 455 631 Fragments arranged by size: 1132 631 455 126 20 Bsu36I CC'TnA_GG Cuts at: 0 712 2364 Size: 712 1652 BtgI C'CryG_G Cuts at: 0 13 476 1274 1961 2364 Size: 13 463 798 687 403 Fragments arranged by size: 798 687 463 403 13 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 598 2364 Size: 598 1766 BtsI GCAGTG_nn' Cuts at: 0 43 1317 1505 2364 Size: 43 1274 188 859 Fragments arranged by size: 1274 859 188 43 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 1641 1676 2364 Size: 1641 35 688 Fragments arranged by size: 1641 688 35 DraI TTT'AAA Cuts at: 0 1287 2364 Size: 1287 1077 EaeI y'GGCC_r Cuts at: 0 1536 2364 Size: 1536 828 EarI CTCTTCn'nnn_ Cuts at: 0 800 1233 1778 1829 1936 2026 2156 2180 Size: 800 433 545 51 107 90 130 24 Cuts at: 2180 2364 Size: 184 Fragments arranged by size: 800 545 433 184 130 107 90 51 24 EcoICRI GAG'CTC Cuts at: 0 944 2364 Size: 944 1420 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 191 212 335 556 780 824 1690 2007 Size: 191 21 123 221 224 44 866 317 Cuts at: 2007 2364 Size: 357 Fragments arranged by size: 866 357 317 224 221 191 123 44 21 EcoNI CCTnn'n_nnAGG Cuts at: 0 833 2364 Size: 833 1531 EcoO109I rG'GnC_Cy Cuts at: 0 256 1689 1977 2006 2142 2282 2283 2364 Size: 256 1433 288 29 136 140 1 81 Fragments arranged by size: 1433 288 256 140 136 81 29 1 EcoRV GAT'ATC Cuts at: 0 483 2364 Size: 483 1881 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 130 162 373 405 1881 1913 1978 2010 Size: 130 32 211 32 1476 32 65 32 Cuts at: 2010 2364 Size: 354 Fragments arranged by size: 1476 354 211 130 65 32 32 32 32 HindIII A'AGCT_T Cuts at: 0 955 1018 2364 Size: 955 63 1346 Fragments arranged by size: 1346 955 63 MfeI C'AATT_G Cuts at: 0 725 2364 Size: 725 1639 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 791 2364 Size: 791 1573 MscI TGG'CCA Cuts at: 0 1538 2364 Size: 1538 826 MslI CAynn'nnrTG Cuts at: 0 518 1343 2364 Size: 518 825 1021 Fragments arranged by size: 1021 825 518 MspA1I CmG'CkG Cuts at: 0 1591 1762 2364 Size: 1591 171 602 Fragments arranged by size: 1591 602 171 NaeI GCC'GGC Cuts at: 0 81 2364 Size: 81 2283 NcoI C'CATG_G Cuts at: 0 1274 1961 2364 Size: 1274 687 403 Fragments arranged by size: 1274 687 403 NgoMIV G'CCGG_C Cuts at: 0 79 2364 Size: 79 2285 NsiI A_TGCA'T Cuts at: 0 1479 2364 Size: 1479 885 NspI r_CATG'y Cuts at: 0 1481 2364 Size: 1481 883 PflMI CCAn_nnn'nTGG Cuts at: 0 1635 2364 Size: 1635 729 PfoI T'CCnGG_A Cuts at: 0 572 2364 Size: 572 1792 PpuMI rG'GwC_Cy Cuts at: 0 256 2006 2364 Size: 256 1750 358 Fragments arranged by size: 1750 358 256 PspOMI G'GGCC_C Cuts at: 0 100 2282 2364 Size: 100 2182 82 Fragments arranged by size: 2182 100 82 PspXI vC'TCGA_Gb Cuts at: 0 613 2364 Size: 613 1751 PstI C_TGCA'G Cuts at: 0 531 1211 1683 2291 2364 Size: 531 680 472 608 73 Fragments arranged by size: 680 608 531 472 73 PvuII CAG'CTG Cuts at: 0 1591 1762 2364 Size: 1591 171 602 Fragments arranged by size: 1591 602 171 SacI G_AGCT'C Cuts at: 0 946 2364 Size: 946 1418 SapI GCTCTTCn'nnn_ Cuts at: 0 1936 2364 Size: 1936 428 SfcI C'TryA_G Cuts at: 0 527 1100 1207 1679 2287 2364 Size: 527 573 107 472 608 77 Fragments arranged by size: 608 573 527 472 107 77 SgrAI Cr'CCGG_yG Cuts at: 0 79 2364 Size: 79 2285 SmlI C'TyrA_G Cuts at: 0 150 613 952 958 2364 Size: 150 463 339 6 1406 Fragments arranged by size: 1406 463 339 150 6 StuI AGG'CCT Cuts at: 0 619 2364 Size: 619 1745 StyI C'CwwG_G Cuts at: 0 779 1012 1274 1961 2364 Size: 779 233 262 687 403 Fragments arranged by size: 779 687 403 262 233 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 1377 2364 Size: 1377 987 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1032 1064 2364 Size: 1032 32 1300 Fragments arranged by size: 1300 1032 32 Tth111I GACn'n_nGTC Cuts at: 0 54 2364 Size: 54 2310 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 756 2364 Size: 756 1608 XhoI C'TCGA_G Cuts at: 0 613 2364 Size: 613 1751 XmnI GAAnn'nnTTC Cuts at: 0 1945 2364 Size: 1945 419 Enzymes that do cut: AcuI AlfI AlwNI ApaI ApoI AvaI BamHI BanI BanII BbsI BbvCI BfrBI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaHI BsaXI BseRI BseYI BsgI BsiHKAI BsmBI Bsp1286I BspMI BsrFI BssSI BstBI BstEII BstYI Bsu36I BtgI BtgZI BtsI CspCI DraI EaeI EarI EcoICRI Eco57MI EcoNI EcoO109I EcoRV Hin4I HindIII MfeI MmeI MscI MslI MspA1I NaeI NcoI NgoMIV NsiI NspI PflMI PfoI PpuMI PspOMI PspXI PstI PvuII SacI SapI SfcI SgrAI SmlI StuI StyI TaqII TstI Tth111I XcmI XhoI XmnI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AfeI AflII AflIII AgeI AhdI AleI AloI ApaLI AscI AseI AsiSI AvrII BaeI BbeI BcgI BciVI BclI BglI BglII BlpI BmtI BsaAI BsaBI BsaWI BsiEI BsiWI BsmI BspEI BspHI BsrBI BsrDI BsrGI BssHII BstAPI BstXI BstZ17I ClaI DraIII DrdI EagI EciI EcoRI FalI FseI FspI FspAI HaeII HincII HpaI KasI KpnI MluI NarI NdeI NheI NotI NruI PacI PasI PciI PmeI PmlI PpiI PshAI PsiI PsrI PvuI RsrII SacII SalI SanDI SbfI ScaI SexAI SfiI SfoI SgfI SmaI SnaBI SpeI SphI SrfI SspI SwaI TatI XbaI XmaI ZraI