FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9436, 146 aa 1>>>pF1KB9436 146 - 146 aa - 146 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.9269+/-0.000765; mu= -4.6647+/- 0.047 mean_var=320.8726+/-64.395, 0's: 0 Z-trim(119.8): 1 B-trim: 0 in 0/56 Lambda= 0.071599 statistics sampled from 21146 (21147) to 21146 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.884), E-opt: 0.2 (0.65), width: 16 Scan time: 1.930 The best scores are: opt bits E(32554) CCDS11184.1 MED9 gene_id:55090|Hs108|chr17 ( 146) 1005 115.0 1.6e-26 >>CCDS11184.1 MED9 gene_id:55090|Hs108|chr17 (146 aa) initn: 1005 init1: 1005 opt: 1005 Z-score: 589.4 bits: 115.0 E(32554): 1.6e-26 Smith-Waterman score: 1005; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146) 10 20 30 40 50 60 pF1KB9 MASAGVAAGRQAEDVLPPTSDQPLPDTKPLPPPQPPPVPAPQPQQSPAPRPQSPARAREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MASAGVAAGRQAEDVLPPTSDQPLPDTKPLPPPQPPPVPAPQPQQSPAPRPQSPARAREE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 ENYSFLPLVHNIIKCMDKDSPEVHQDLNALKSKFQEMRKLISTMPGIHLSPEQQQQQLQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ENYSFLPLVHNIIKCMDKDSPEVHQDLNALKSKFQEMRKLISTMPGIHLSPEQQQQQLQS 70 80 90 100 110 120 130 140 pF1KB9 LREQVRTKNELLQKYKSLCMFEIPKE :::::::::::::::::::::::::: CCDS11 LREQVRTKNELLQKYKSLCMFEIPKE 130 140 146 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 17:02:59 2016 done: Fri Nov 4 17:02:59 2016 Total Scan time: 1.930 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]