Result of FASTA (omim) for
pFN21AB8575
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8575, 339 aa
1>>>pF1KB8575 339 - 339 aa - 339 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9943+/-0.000491; mu= 8.3326+/- 0.031
mean_var=124.2446+/-24.255, 0's: 0 Z-trim(110.5): 62 B-trim: 191 in 2/54
Lambda= 0.115063
statistics sampled from 18827 (18877) to 18827 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.575), E-opt: 0.2 (0.221), width: 16
Scan time: 7.390
The best scores are: opt bits E(85289)
NP_009106 (OMIM: 611225,611605) erlin-2 isoform 1 ( 339) 2139 366.7 3.9e-101
XP_005273449 (OMIM: 611225,611605) PREDICTED: erli ( 339) 2139 366.7 3.9e-101
XP_006716343 (OMIM: 611225,611605) PREDICTED: erli ( 257) 1606 278.2 1.3e-74
XP_005269499 (OMIM: 611604,615681) PREDICTED: erli ( 348) 1588 275.3 1.4e-73
NP_006450 (OMIM: 611604,615681) erlin-1 [Homo sapi ( 348) 1588 275.3 1.4e-73
XP_016871030 (OMIM: 611604,615681) PREDICTED: erli ( 348) 1588 275.3 1.4e-73
NP_001094096 (OMIM: 611604,615681) erlin-1 [Homo s ( 348) 1588 275.3 1.4e-73
NP_001003791 (OMIM: 611225,611605) erlin-2 isoform ( 152) 923 164.7 1.2e-40
XP_016868489 (OMIM: 611225,611605) PREDICTED: erli ( 152) 923 164.7 1.2e-40
NP_001003790 (OMIM: 611225,611605) erlin-2 isoform ( 152) 923 164.7 1.2e-40
>>NP_009106 (OMIM: 611225,611605) erlin-2 isoform 1 [Hom (339 aa)
initn: 2139 init1: 2139 opt: 2139 Z-score: 1936.7 bits: 366.7 E(85289): 3.9e-101
Smith-Waterman score: 2139; 100.0% identity (100.0% similar) in 339 aa overlap (1-339:1-339)
10 20 30 40 50 60
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD
250 260 270 280 290 300
310 320 330
pF1KB8 IPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
:::::::::::::::::::::::::::::::::::::::
NP_009 IPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
310 320 330
>>XP_005273449 (OMIM: 611225,611605) PREDICTED: erlin-2 (339 aa)
initn: 2139 init1: 2139 opt: 2139 Z-score: 1936.7 bits: 366.7 E(85289): 3.9e-101
Smith-Waterman score: 2139; 100.0% identity (100.0% similar) in 339 aa overlap (1-339:1-339)
10 20 30 40 50 60
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKD
250 260 270 280 290 300
310 320 330
pF1KB8 IPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
:::::::::::::::::::::::::::::::::::::::
XP_005 IPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
310 320 330
>>XP_006716343 (OMIM: 611225,611605) PREDICTED: erlin-2 (257 aa)
initn: 1606 init1: 1606 opt: 1606 Z-score: 1460.3 bits: 278.2 E(85289): 1.3e-74
Smith-Waterman score: 1606; 100.0% identity (100.0% similar) in 257 aa overlap (83-339:1-257)
60 70 80 90 100 110
pF1KB8 LPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYD
::::::::::::::::::::::::::::::
XP_006 MIYFDRIEVVNFLVPNAVYDIVKNYTADYD
10 20 30
120 130 140 150 160 170
pF1KB8 KALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTK
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB8 PNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQK
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB8 VMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASN
160 170 180 190 200 210
300 310 320 330
pF1KB8 SKIYFGKDIPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
:::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SKIYFGKDIPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
220 230 240 250
>>XP_005269499 (OMIM: 611604,615681) PREDICTED: erlin-1 (348 aa)
initn: 1607 init1: 1578 opt: 1588 Z-score: 1442.2 bits: 275.3 E(85289): 1.4e-73
Smith-Waterman score: 1588; 79.6% identity (94.2% similar) in 309 aa overlap (1-309:3-311)
10 20 30 40 50
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITS
:.: ..::.. .. . :....:::::::..::::::::::: ::::.:.::::::.
XP_005 MNMTQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 YKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFN
..:::::::::::::::::::::::::.:::::::.:.: ::.:::.::::::::.::::
XP_005 FRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 KIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEA
:::::::::::.::::::::::::::::::: :::.::. :::::.:::::::::.::::
XP_005 KIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 IRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKET
::::.::::.::::::::::::::::::::::::::.:::::.::::.: . ::::::::
XP_005 IRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEKET
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 EKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFG
::.:::::::::::::::::::: :.: : : .:: :::::::.: ::.:::::::::::
XP_005 EKRISEIEDAAFLAREKAKADAEYYAAHKYATSNKHKLTPEYLELKKYQAIASNSKIYFG
250 260 270 280 290 300
300 310 320 330
pF1KB8 KDIPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
..:::::.::.
XP_005 SNIPNMFVDSSCALKYSDIRTGRESSLPSKEALEPSGENVIQNKESTG
310 320 330 340
>>NP_006450 (OMIM: 611604,615681) erlin-1 [Homo sapiens] (348 aa)
initn: 1607 init1: 1578 opt: 1588 Z-score: 1442.2 bits: 275.3 E(85289): 1.4e-73
Smith-Waterman score: 1588; 79.6% identity (94.2% similar) in 309 aa overlap (1-309:3-311)
10 20 30 40 50
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITS
:.: ..::.. .. . :....:::::::..::::::::::: ::::.:.::::::.
NP_006 MNMTQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 YKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFN
..:::::::::::::::::::::::::.:::::::.:.: ::.:::.::::::::.::::
NP_006 FRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 KIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEA
:::::::::::.::::::::::::::::::: :::.::. :::::.:::::::::.::::
NP_006 KIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 IRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKET
::::.::::.::::::::::::::::::::::::::.:::::.::::.: . ::::::::
NP_006 IRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEKET
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 EKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFG
::.:::::::::::::::::::: :.: : : .:: :::::::.: ::.:::::::::::
NP_006 EKRISEIEDAAFLAREKAKADAEYYAAHKYATSNKHKLTPEYLELKKYQAIASNSKIYFG
250 260 270 280 290 300
300 310 320 330
pF1KB8 KDIPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
..:::::.::.
NP_006 SNIPNMFVDSSCALKYSDIRTGRESSLPSKEALEPSGENVIQNKESTG
310 320 330 340
>>XP_016871030 (OMIM: 611604,615681) PREDICTED: erlin-1 (348 aa)
initn: 1607 init1: 1578 opt: 1588 Z-score: 1442.2 bits: 275.3 E(85289): 1.4e-73
Smith-Waterman score: 1588; 79.6% identity (94.2% similar) in 309 aa overlap (1-309:3-311)
10 20 30 40 50
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITS
:.: ..::.. .. . :....:::::::..::::::::::: ::::.:.::::::.
XP_016 MNMTQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 YKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFN
..:::::::::::::::::::::::::.:::::::.:.: ::.:::.::::::::.::::
XP_016 FRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 KIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEA
:::::::::::.::::::::::::::::::: :::.::. :::::.:::::::::.::::
XP_016 KIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 IRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKET
::::.::::.::::::::::::::::::::::::::.:::::.::::.: . ::::::::
XP_016 IRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEKET
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 EKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFG
::.:::::::::::::::::::: :.: : : .:: :::::::.: ::.:::::::::::
XP_016 EKRISEIEDAAFLAREKAKADAEYYAAHKYATSNKHKLTPEYLELKKYQAIASNSKIYFG
250 260 270 280 290 300
300 310 320 330
pF1KB8 KDIPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
..:::::.::.
XP_016 SNIPNMFVDSSCALKYSDIRTGRESSLPSKEALEPSGENVIQNKESTG
310 320 330 340
>>NP_001094096 (OMIM: 611604,615681) erlin-1 [Homo sapie (348 aa)
initn: 1607 init1: 1578 opt: 1588 Z-score: 1442.2 bits: 275.3 E(85289): 1.4e-73
Smith-Waterman score: 1588; 79.6% identity (94.2% similar) in 309 aa overlap (1-309:3-311)
10 20 30 40 50
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITS
:.: ..::.. .. . :....:::::::..::::::::::: ::::.:.::::::.
NP_001 MNMTQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 YKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFN
..:::::::::::::::::::::::::.:::::::.:.: ::.:::.::::::::.::::
NP_001 FRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 KIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEA
:::::::::::.::::::::::::::::::: :::.::. :::::.:::::::::.::::
NP_001 KIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 IRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKET
::::.::::.::::::::::::::::::::::::::.:::::.::::.: . ::::::::
NP_001 IRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEKET
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 EKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFG
::.:::::::::::::::::::: :.: : : .:: :::::::.: ::.:::::::::::
NP_001 EKRISEIEDAAFLAREKAKADAEYYAAHKYATSNKHKLTPEYLELKKYQAIASNSKIYFG
250 260 270 280 290 300
300 310 320 330
pF1KB8 KDIPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN
..:::::.::.
NP_001 SNIPNMFVDSSCALKYSDIRTGRESSLPSKEALEPSGENVIQNKESTG
310 320 330 340
>>NP_001003791 (OMIM: 611225,611605) erlin-2 isoform 2 [ (152 aa)
initn: 940 init1: 923 opt: 923 Z-score: 850.8 bits: 164.7 E(85289): 1.2e-40
Smith-Waterman score: 923; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141)
10 20 30 40 50 60
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR
:::::::::::::::::::::
NP_001 HHELNQFCSVHTLQEVYIELFGLENDFSQESS
130 140 150
>>XP_016868489 (OMIM: 611225,611605) PREDICTED: erlin-2 (152 aa)
initn: 940 init1: 923 opt: 923 Z-score: 850.8 bits: 164.7 E(85289): 1.2e-40
Smith-Waterman score: 923; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141)
10 20 30 40 50 60
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR
:::::::::::::::::::::
XP_016 HHELNQFCSVHTLQEVYIELFGLENDFSQESS
130 140 150
>>NP_001003790 (OMIM: 611225,611605) erlin-2 isoform 2 [ (152 aa)
initn: 940 init1: 923 opt: 923 Z-score: 850.8 bits: 164.7 E(85289): 1.2e-40
Smith-Waterman score: 923; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141)
10 20 30 40 50 60
pF1KB8 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIR
:::::::::::::::::::::
NP_001 HHELNQFCSVHTLQEVYIELFGLENDFSQESS
130 140 150
339 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 13:18:38 2016 done: Fri Nov 4 13:18:39 2016
Total Scan time: 7.390 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]