Result of FASTA (omim) for
pFN21AB8292
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8292, 449 aa
1>>>pF1KB8292 449 - 449 aa - 449 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8774+/-0.000576; mu= 6.6539+/- 0.035
mean_var=328.7573+/-71.289, 0's: 0 Z-trim(115.4): 1975 B-trim: 1348 in 1/57
Lambda= 0.070735
statistics sampled from 23518 (25871) to 23518 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.303), width: 16
Scan time: 6.260
The best scores are: opt bits E(85289)
NP_001230633 (OMIM: 602126) zinc finger and BTB do ( 449) 3025 323.3 8.3e-88
NP_001137295 (OMIM: 602126) zinc finger and BTB do ( 449) 3025 323.3 8.3e-88
NP_003400 (OMIM: 602126) zinc finger and BTB domai ( 449) 3025 323.3 8.3e-88
NP_001230631 (OMIM: 602126) zinc finger and BTB do ( 449) 3025 323.3 8.3e-88
NP_872439 (OMIM: 616181) zinc finger protein 713 [ ( 443) 532 68.9 3.1e-11
NP_001177720 (OMIM: 613864) zinc finger protein 31 ( 563) 530 68.8 4.1e-11
NP_065984 (OMIM: 613864) zinc finger protein 317 i ( 595) 530 68.9 4.3e-11
XP_005259469 (OMIM: 604749) PREDICTED: zinc finger ( 734) 531 69.1 4.5e-11
NP_004225 (OMIM: 604749) zinc finger protein 235 [ ( 738) 531 69.1 4.5e-11
NP_001308284 (OMIM: 611024) zinc finger protein 66 ( 553) 520 67.8 8.3e-11
NP_001308285 (OMIM: 611024) zinc finger protein 66 ( 610) 520 67.8 8.8e-11
XP_011525511 (OMIM: 611024) PREDICTED: zinc finger ( 610) 520 67.8 8.8e-11
XP_011525510 (OMIM: 611024) PREDICTED: zinc finger ( 610) 520 67.8 8.8e-11
NP_071386 (OMIM: 611024) zinc finger protein 667 i ( 610) 520 67.8 8.8e-11
NP_001247415 (OMIM: 604086) zinc finger protein 15 ( 538) 519 67.7 8.8e-11
NP_001247416 (OMIM: 604086) zinc finger protein 15 ( 538) 519 67.7 8.8e-11
NP_932355 (OMIM: 604086) zinc finger protein 155 i ( 538) 519 67.7 8.8e-11
XP_005259272 (OMIM: 604086) PREDICTED: zinc finger ( 538) 519 67.7 8.8e-11
NP_003436 (OMIM: 604086) zinc finger protein 155 i ( 538) 519 67.7 8.8e-11
NP_001247417 (OMIM: 604086) zinc finger protein 15 ( 549) 519 67.7 8.9e-11
XP_016882737 (OMIM: 604086) PREDICTED: zinc finger ( 549) 519 67.7 8.9e-11
XP_011525580 (OMIM: 604086) PREDICTED: zinc finger ( 549) 519 67.7 8.9e-11
XP_011525581 (OMIM: 604086) PREDICTED: zinc finger ( 549) 519 67.7 8.9e-11
NP_001165697 (OMIM: 613903) zinc finger protein 54 ( 628) 511 66.9 1.7e-10
NP_689819 (OMIM: 613903) zinc finger protein 540 i ( 660) 511 67.0 1.7e-10
NP_001165696 (OMIM: 613903) zinc finger protein 54 ( 660) 511 67.0 1.7e-10
XP_016882236 (OMIM: 165260) PREDICTED: zinc finger ( 327) 504 65.8 1.9e-10
XP_011525220 (OMIM: 165260) PREDICTED: zinc finger ( 327) 504 65.8 1.9e-10
XP_011525219 (OMIM: 165260) PREDICTED: zinc finger ( 491) 504 66.1 2.4e-10
NP_862829 (OMIM: 165260) zinc finger and SCAN doma ( 491) 504 66.1 2.4e-10
NP_001308045 (OMIM: 165260) zinc finger and SCAN d ( 491) 504 66.1 2.4e-10
XP_006723255 (OMIM: 165260) PREDICTED: zinc finger ( 491) 504 66.1 2.4e-10
NP_066358 (OMIM: 194556) zinc finger protein 14 [H ( 642) 506 66.5 2.4e-10
XP_006716719 (OMIM: 194531) PREDICTED: zinc finger ( 590) 505 66.3 2.5e-10
XP_006716717 (OMIM: 194531) PREDICTED: zinc finger ( 590) 505 66.3 2.5e-10
XP_011515599 (OMIM: 194531) PREDICTED: zinc finger ( 590) 505 66.3 2.5e-10
NP_001269726 (OMIM: 194531) zinc finger protein 7 ( 590) 505 66.3 2.5e-10
XP_011513163 (OMIM: 602277) PREDICTED: zinc finger ( 675) 506 66.5 2.5e-10
NP_001305822 (OMIM: 602277) zinc finger protein 18 ( 675) 506 66.5 2.5e-10
XP_016881641 (OMIM: 604750) PREDICTED: zinc finger ( 502) 503 66.0 2.6e-10
XP_016881642 (OMIM: 604750) PREDICTED: zinc finger ( 502) 503 66.0 2.6e-10
NP_001305821 (OMIM: 602277) zinc finger protein 18 ( 751) 506 66.6 2.7e-10
NP_009080 (OMIM: 602277) zinc finger protein 184 i ( 751) 506 66.6 2.7e-10
NP_001305820 (OMIM: 602277) zinc finger protein 18 ( 751) 506 66.6 2.7e-10
XP_011515597 (OMIM: 194531) PREDICTED: zinc finger ( 685) 505 66.4 2.7e-10
XP_011515598 (OMIM: 194531) PREDICTED: zinc finger ( 685) 505 66.4 2.7e-10
XP_011515595 (OMIM: 194531) PREDICTED: zinc finger ( 686) 505 66.4 2.7e-10
NP_003407 (OMIM: 194531) zinc finger protein 7 iso ( 686) 505 66.4 2.7e-10
XP_011515596 (OMIM: 194531) PREDICTED: zinc finger ( 686) 505 66.4 2.7e-10
XP_011513317 (OMIM: 603978) PREDICTED: zinc finger ( 611) 504 66.2 2.7e-10
>>NP_001230633 (OMIM: 602126) zinc finger and BTB domain (449 aa)
initn: 3025 init1: 3025 opt: 3025 Z-score: 1697.5 bits: 323.3 E(85289): 8.3e-88
Smith-Waterman score: 3025; 100.0% identity (100.0% similar) in 449 aa overlap (1-449:1-449)
10 20 30 40 50 60
pF1KB8 MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
370 380 390 400 410 420
430 440
pF1KB8 SAIQSETEQLQAAAMAAEAEQQLETIACS
:::::::::::::::::::::::::::::
NP_001 SAIQSETEQLQAAAMAAEAEQQLETIACS
430 440
>>NP_001137295 (OMIM: 602126) zinc finger and BTB domain (449 aa)
initn: 3025 init1: 3025 opt: 3025 Z-score: 1697.5 bits: 323.3 E(85289): 8.3e-88
Smith-Waterman score: 3025; 100.0% identity (100.0% similar) in 449 aa overlap (1-449:1-449)
10 20 30 40 50 60
pF1KB8 MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
370 380 390 400 410 420
430 440
pF1KB8 SAIQSETEQLQAAAMAAEAEQQLETIACS
:::::::::::::::::::::::::::::
NP_001 SAIQSETEQLQAAAMAAEAEQQLETIACS
430 440
>>NP_003400 (OMIM: 602126) zinc finger and BTB domain-co (449 aa)
initn: 3025 init1: 3025 opt: 3025 Z-score: 1697.5 bits: 323.3 E(85289): 8.3e-88
Smith-Waterman score: 3025; 100.0% identity (100.0% similar) in 449 aa overlap (1-449:1-449)
10 20 30 40 50 60
pF1KB8 MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
370 380 390 400 410 420
430 440
pF1KB8 SAIQSETEQLQAAAMAAEAEQQLETIACS
:::::::::::::::::::::::::::::
NP_003 SAIQSETEQLQAAAMAAEAEQQLETIACS
430 440
>>NP_001230631 (OMIM: 602126) zinc finger and BTB domain (449 aa)
initn: 3025 init1: 3025 opt: 3025 Z-score: 1697.5 bits: 323.3 E(85289): 8.3e-88
Smith-Waterman score: 3025; 100.0% identity (100.0% similar) in 449 aa overlap (1-449:1-449)
10 20 30 40 50 60
pF1KB8 MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
370 380 390 400 410 420
430 440
pF1KB8 SAIQSETEQLQAAAMAAEAEQQLETIACS
:::::::::::::::::::::::::::::
NP_001 SAIQSETEQLQAAAMAAEAEQQLETIACS
430 440
>>NP_872439 (OMIM: 616181) zinc finger protein 713 [Homo (443 aa)
initn: 1104 init1: 493 opt: 532 Z-score: 322.6 bits: 68.9 E(85289): 3.1e-11
Smith-Waterman score: 532; 37.8% identity (73.5% similar) in 196 aa overlap (224-416:232-424)
200 210 220 230 240 250
pF1KB8 TLRVQEAILKELGSEEVRKVNCYGQEVESMETP-ESKDLGSQTPQALTFNDGM--SEVKD
::: : .. :. : . ..: . .: .
NP_872 SIKIPLNSDTQGNSIKHNSDLIYYQGNYVRETPYEYSECGKIFNQHILLTDHIHTAEKPS
210 220 230 240 250 260
260 270 280 290 300 310
pF1KB8 EQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMC
: ... ..: . ..:: :. . :. ::: ::.. .: .:...::...::.:. :
NP_872 ECGKAFSHTSSLSQPQMLLTGE--KPYKCDECGKRFSQRIHLIQHQRIHTGEKPFICNGC
270 280 290 300 310
320 330 340 350 360 370
pF1KB8 TKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAF
:.: .. . .::.:::: :::.:. :::.: : .: .:.:.:..:.:. : .: :::
NP_872 GKAFRQHSSFTQHLRIHTGEKPYKCNQCGKAFSRITSLTEHHRLHTGEKPYECGFCGKAF
320 330 340 350 360 370
380 390 400 410 420 430
pF1KB8 KHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSAIQSETEQL
....::..::: : ::::. :. : :::.... :..:.. .:...:
NP_872 SQRTHLNQHERTHTGEKPYKCNECGKAFSQSAHLNQHRK-IHTREKLCEYKCEQTVRHSP
380 390 400 410 420 430
440
pF1KB8 QAAAMAAEAEQQLETIACS
NP_872 SFSST
440
>>NP_001177720 (OMIM: 613864) zinc finger protein 317 is (563 aa)
initn: 1941 init1: 489 opt: 530 Z-score: 320.4 bits: 68.8 E(85289): 4.1e-11
Smith-Waterman score: 530; 40.9% identity (68.5% similar) in 181 aa overlap (237-415:179-356)
210 220 230 240 250 260
pF1KB8 SEEVRKVNCYGQEVESMETPESKDLGSQTPQALTFNDG--MSEVKDEQTPGWTTAASDMK
: ... :: : : .. : ..::.:: .
NP_001 LTQPMGRHAGKRPYHRRDYGVAFKGRPHLTQHMSMYDGRKMHECHQCQK-AFTTSASLTR
150 160 170 180 190 200
270 280 290 300 310 320
pF1KB8 FEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHL
. . :. . :. :::.:.: . ::.: . : ..:: : .: ..: : . :: :.
NP_001 HRRIHTGE--KPYECSDCGKAFNDPSALRSHARTHLKEKPFDCSQCGNAFRTLSALKIHM
210 220 230 240 250 260
330 340 350 360 370 380
pF1KB8 KIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHR
..::: .::.:. :::.. :. : :.:.:..:::. :: : :::.: ::::.: : :
NP_001 RVHTGERPYKCDQCGKAYGRSCHLIAHKRTHTGERPYECHDCGKAFQHPSHLKEHVRNHT
270 280 290 300 310 320
390 400 410 420 430 440
pF1KB8 GEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSAIQSETEQLQAAAMAAEAEQQLE
::::..: .: ::: :... :..: :.
NP_001 GEKPYACTQCGKAFRWKSNFNLHKKNHMVEKTYECKECGKSFGDLVSRRKHMRIHIVKKP
330 340 350 360 370 380
pF1KB8 TIACS
NP_001 VECRQCGKTFRNQSILKTHMNSHTGEKPYGCDLCGKAFSASSNLTAHRKIHTQERRYECA
390 400 410 420 430 440
>--
initn: 1110 init1: 393 opt: 416 Z-score: 257.5 bits: 57.2 E(85289): 1.3e-07
Smith-Waterman score: 416; 38.5% identity (67.8% similar) in 143 aa overlap (274-416:383-524)
250 260 270 280 290 300
pF1KB8 GMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADR
.. . :. ::::: ... :. : . ::...
NP_001 MVEKTYECKECGKSFGDLVSRRKHMRIHIVKKPVECRQCGKTFRNQSILKTHMNSHTGEK
360 370 380 390 400 410
310 320 330 340 350 360
pF1KB8 PFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFAC
:. :..: :.:.....: : :::: . : : .::: : . ..: :: .. :
NP_001 PYGCDLCGKAFSASSNLTAHRKIHTQERRYECAACGKVFGDYLSRRRHMSVHLVKKRVEC
420 430 440 450 460 470
370 380 390 400 410 420
pF1KB8 HMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSAI
..: :::...: :: : : : ::::. : : :::. .:.:. :. .:. .:
NP_001 RQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRR-IHTGEKPYECLVC
480 490 500 510 520 530
430 440
pF1KB8 QSETEQLQAAAMAAEAEQQLETIACS
NP_001 GKAFSDHSSLRSHVKTHRGEKLFVSSVWKRLQ
540 550 560
>>NP_065984 (OMIM: 613864) zinc finger protein 317 isofo (595 aa)
initn: 1941 init1: 489 opt: 530 Z-score: 320.2 bits: 68.9 E(85289): 4.3e-11
Smith-Waterman score: 537; 31.4% identity (61.0% similar) in 315 aa overlap (125-415:77-388)
100 110 120 130 140 150
pF1KB8 TAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSKYCLKINRP--I
::.. .. .: .. .. ....: :
NP_065 HTPSVGSQESVTFQDVAVDFTEKEWPLLDSSQRKLYKDVMLENYSNLTSLGYQVGKPSLI
50 60 70 80 90 100
160 170 180 190 200
pF1KB8 GDAADTQDDDVEEIGDQDDSPSD-DTVEGTPPS--QED--GKSPTTTLRVQEAILKELGS
. . .. .:: : .. . .: .: : : .:: :: . . ...: : : ..
NP_065 SHLEQEEEPRTEERGAHQGACADWETPSKTKWSLLMEDIFGKETPSGVTMERAGLGEKST
110 120 130 140 150 160
210 220 230 240 250
pF1KB8 EEVRKVNCYGQE---VESM-----ETP-ESKDLG------SQTPQALTFNDG--MSEVKD
: .. . .:.. .. : . : . .: : . : ... :: : : ..
NP_065 EYAHLFEVFGMDPHLTQPMGRHAGKRPYHRRDYGVAFKGRPHLTQHMSMYDGRKMHECHQ
170 180 190 200 210 220
260 270 280 290 300 310
pF1KB8 EQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMC
: ..::.:: . . . : .. :. :::.:.: . ::.: . : ..:: : .:
NP_065 CQK-AFTTSASLTRHRRIHTG--EKPYECSDCGKAFNDPSALRSHARTHLKEKPFDCSQC
230 240 250 260 270 280
320 330 340 350 360 370
pF1KB8 TKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAF
..: : . :: :...::: .::.:. :::.. :. : :.:.:..:::. :: : :::
NP_065 GNAFRTLSALKIHMRVHTGERPYKCDQCGKAYGRSCHLIAHKRTHTGERPYECHDCGKAF
290 300 310 320 330 340
380 390 400 410 420 430
pF1KB8 KHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSAIQSETEQL
.: ::::.: : : ::::..: .: ::: :... :..: :.
NP_065 QHPSHLKEHVRNHTGEKPYACTQCGKAFRWKSNFNLHKKNHMVEKTYECKECGKSFGDLV
350 360 370 380 390 400
440
pF1KB8 QAAAMAAEAEQQLETIACS
NP_065 SRRKHMRIHIVKKPVECRQCGKTFRNQSILKTHMNSHTGEKPYGCDLCGKAFSASSNLTA
410 420 430 440 450 460
>--
initn: 1110 init1: 393 opt: 416 Z-score: 257.3 bits: 57.2 E(85289): 1.4e-07
Smith-Waterman score: 416; 38.5% identity (67.8% similar) in 143 aa overlap (274-416:415-556)
250 260 270 280 290 300
pF1KB8 GMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADR
.. . :. ::::: ... :. : . ::...
NP_065 MVEKTYECKECGKSFGDLVSRRKHMRIHIVKKPVECRQCGKTFRNQSILKTHMNSHTGEK
390 400 410 420 430 440
310 320 330 340 350 360
pF1KB8 PFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFAC
:. :..: :.:.....: : :::: . : : .::: : . ..: :: .. :
NP_065 PYGCDLCGKAFSASSNLTAHRKIHTQERRYECAACGKVFGDYLSRRRHMSVHLVKKRVEC
450 460 470 480 490 500
370 380 390 400 410 420
pF1KB8 HMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSAI
..: :::...: :: : : : ::::. : : :::. .:.:. :. .:. .:
NP_065 RQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRR-IHTGEKPYECLVC
510 520 530 540 550 560
430 440
pF1KB8 QSETEQLQAAAMAAEAEQQLETIACS
NP_065 GKAFSDHSSLRSHVKTHRGEKLFVSSVWKRLQ
570 580 590
>>XP_005259469 (OMIM: 604749) PREDICTED: zinc finger pro (734 aa)
initn: 3624 init1: 505 opt: 531 Z-score: 319.8 bits: 69.1 E(85289): 4.5e-11
Smith-Waterman score: 548; 34.6% identity (60.5% similar) in 286 aa overlap (139-416:198-453)
110 120 130 140 150 160
pF1KB8 MSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDA----ADTQDDDVE
: :.: : : : : . .::..
XP_005 QEFPTGKVPNSWSKIYLNETQNYQRSCKQTQMKNKLC--IFAPYVDIFSCISHHHDDNIV
170 180 190 200 210 220
170 180 190 200 210 220
pF1KB8 EIGDQDDSPSD---DTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVE
. :. : :: ::.. .: .:.. .. : . :.: . : .
XP_005 HKRDKVHSNSDCGKDTLKVSPLTQRSIHTGQKTYQ---------GNECEEAFN----DSS
230 240 250 260 270
230 240 250 260 270 280
pF1KB8 SMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLY-GHHREQIACQ
:.: .. ::...: : . :: :. .: . . . :..: :.
XP_005 SLELHKQVHLGKKSPACSTHE------KD------TSYSSGIPVQQSVRTGKKRYW--CH
280 290 300 310
290 300 310 320 330 340
pF1KB8 ACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGK
::: ::. . :. :...::...:..:. : :.:. ..:: :: :::: ::: :. :::
XP_005 ECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGK
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB8 SFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAK
.: :. ::. : :::..:.:. :..: :.: ..:::. ::: : ::::. ::.: : :.
XP_005 GFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSC
380 390 400 410 420 430
410 420 430 440
pF1KB8 ASDLKRHENNMHSERKQVTPSAIQSETEQLQAAAMAAEAEQQLETIACS
.:.:. :. .:.:.:
XP_005 SSNLHTHQR-VHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASS
440 450 460 470 480 490
>--
initn: 2543 init1: 482 opt: 506 Z-score: 306.0 bits: 66.5 E(85289): 2.6e-10
Smith-Waterman score: 509; 36.9% identity (68.4% similar) in 187 aa overlap (269-448:470-656)
240 250 260 270 280 290
pF1KB8 LTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHR-----EQIACQACGKTFSDEGRLR
:..:.: . :. ::: ::. . ..
XP_005 SNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQ
440 450 460 470 480 490
300 310 320 330 340 350
pF1KB8 KHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHER
.:...::...:: :..: :::. ..... : ..::: :::.:::::: : . .:..:.:
XP_005 SHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQR
500 510 520 530 540 550
360 370 380 390 400 410
pF1KB8 VHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHS
::..:.:. :. : :.:.. :.:. :. : ::::: : .: : :..:: :. :. .
XP_005 VHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTG
560 570 580 590 600 610
420 430 440
pF1KB8 ER--KQVTPSAIQSETEQLQAAAMAAEAEQQLETIACS
:. : : . :. .::. . .:. .. :
XP_005 EKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPY
620 630 640 650 660 670
XP_005 TCQQCGKGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRVHTGGNL
680 690 700 710 720 730
>>NP_004225 (OMIM: 604749) zinc finger protein 235 [Homo (738 aa)
initn: 3624 init1: 505 opt: 531 Z-score: 319.8 bits: 69.1 E(85289): 4.5e-11
Smith-Waterman score: 548; 34.6% identity (60.5% similar) in 286 aa overlap (139-416:202-457)
110 120 130 140 150 160
pF1KB8 MSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSKYCLKINRPIGDA----ADTQDDDVE
: :.: : : : : . .::..
NP_004 QEFPTGKVPNSWSKIYLNETQNYQRSCKQTQMKNKLC--IFAPYVDIFSCISHHHDDNIV
180 190 200 210 220
170 180 190 200 210 220
pF1KB8 EIGDQDDSPSD---DTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQEVE
. :. : :: ::.. .: .:.. .. : . :.: . : .
NP_004 HKRDKVHSNSDCGKDTLKVSPLTQRSIHTGQKTYQ---------GNECEEAFN----DSS
230 240 250 260 270
230 240 250 260 270 280
pF1KB8 SMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLY-GHHREQIACQ
:.: .. ::...: : . :: :. .: . . . :..: :.
NP_004 SLELHKQVHLGKKSPACSTHE------KD------TSYSSGIPVQQSVRTGKKRYW--CH
280 290 300 310 320
290 300 310 320 330 340
pF1KB8 ACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGK
::: ::. . :. :...::...:..:. : :.:. ..:: :: :::: ::: :. :::
NP_004 ECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGK
330 340 350 360 370 380
350 360 370 380 390 400
pF1KB8 SFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAK
.: :. ::. : :::..:.:. :..: :.: ..:::. ::: : ::::. ::.: : :.
NP_004 GFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSC
390 400 410 420 430 440
410 420 430 440
pF1KB8 ASDLKRHENNMHSERKQVTPSAIQSETEQLQAAAMAAEAEQQLETIACS
.:.:. :. .:.:.:
NP_004 SSNLHTHQR-VHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASS
450 460 470 480 490 500
>--
initn: 2543 init1: 482 opt: 506 Z-score: 306.0 bits: 66.5 E(85289): 2.6e-10
Smith-Waterman score: 509; 36.9% identity (68.4% similar) in 187 aa overlap (269-448:474-660)
240 250 260 270 280 290
pF1KB8 LTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHR-----EQIACQACGKTFSDEGRLR
:..:.: . :. ::: ::. . ..
NP_004 SNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQ
450 460 470 480 490 500
300 310 320 330 340 350
pF1KB8 KHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHER
.:...::...:: :..: :::. ..... : ..::: :::.:::::: : . .:..:.:
NP_004 SHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQR
510 520 530 540 550 560
360 370 380 390 400 410
pF1KB8 VHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHS
::..:.:. :. : :.:.. :.:. :. : ::::: : .: : :..:: :. :. .
NP_004 VHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTG
570 580 590 600 610 620
420 430 440
pF1KB8 ER--KQVTPSAIQSETEQLQAAAMAAEAEQQLETIACS
:. : : . :. .::. . .:. .. :
NP_004 EKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPY
630 640 650 660 670 680
NP_004 TCQQCGKGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRVHTGGNL
690 700 710 720 730
>>NP_001308284 (OMIM: 611024) zinc finger protein 667 is (553 aa)
initn: 1862 init1: 497 opt: 520 Z-score: 315.0 bits: 67.8 E(85289): 8.3e-11
Smith-Waterman score: 520; 47.8% identity (76.8% similar) in 138 aa overlap (279-416:416-552)
250 260 270 280 290 300
pF1KB8 KDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCE
:. :::.:: . : .:...:: :::. :.
NP_001 FKCNKCSKVFGRQSFLIEHQRIHTGEKPYQCEECGKAFSHRISLTRHKRIHTEDRPYECD
390 400 410 420 430 440
310 320 330 340 350 360
pF1KB8 MCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDK
.: :.:. .::: .: .:::: :::.:..:::.: . .: ::: :..:.:. :. : :
NP_001 QCGKAFSQSAHLAQHERIHTGEKPYTCKTCGKAFSQRTSLILHERSHTGEKPYECNECGK
450 460 470 480 490 500
370 380 390 400 410 420
pF1KB8 AFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSAIQSETE
::. : : :.: : .:::. :..: ::....:.: ::.:. :::.:
NP_001 AFSSGSDLIRHQRSHSSEKPYECSKCGKAYSRSSSLIRHQNT-HSEEKA
510 520 530 540 550
430 440
pF1KB8 QLQAAAMAAEAEQQLETIACS
>--
initn: 679 init1: 250 opt: 309 Z-score: 198.6 bits: 46.3 E(85289): 0.00025
Smith-Waterman score: 309; 32.7% identity (61.9% similar) in 147 aa overlap (271-416:80-222)
250 260 270 280 290
pF1KB8 FNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHH-REQIACQACGKTFSDEGRLRKHEKLH
:: .. . :. :::::: :. :...:
NP_001 ICQKLVSAQQKAPTRKSGCNKNSVLVKPKKGHSGKKPLKCNDCGKTFSRSFSLKLHQNIH
50 60 70 80 90 100
300 310 320 330 340 350
pF1KB8 TADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNER
:...:: : : :.: . . : .::.: : . :. ::.:: . : : :.:....
NP_001 TGEKPFECSNCRKAFRQISSILLHQRIHSGKKSHECNKCGESFNQRTTLILHMRIHDGKE
110 120 130 140 150 160
360 370 380 390 400 410
pF1KB8 PFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVT
. : ::... . .. :.. : . : .: ::: . :.: :.. .:. .:
NP_001 ILD---CGKALSQCQSFNIHQKIHVVGNVCQCRKCGKAFNQMSSLLLHKK-IHNGKKTHK
170 180 190 200 210 220
420 430 440
pF1KB8 PSAIQSETEQLQAAAMAAEAEQQLETIACS
NP_001 YNKCGRGFKKKSVFVVHKRIHAGEKIPENAKALSQSLQQRSHHLENPFKCRKCGKLFNRI
230 240 250 260 270 280
>--
initn: 628 init1: 238 opt: 309 Z-score: 198.6 bits: 46.3 E(85289): 0.00025
Smith-Waterman score: 376; 37.4% identity (65.3% similar) in 147 aa overlap (272-416:267-412)
250 260 270 280 290 300
pF1KB8 NDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQ-IACQACGKTFSDEGRLRKHEKLHT
:: :. . :. ::: :. . : :...::
NP_001 SVFVVHKRIHAGEKIPENAKALSQSLQQRSHHLENPFKCRKCGKLFNRISPLMLHQRIHT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP
...:. :. : : : . : ::.::.: : : :. : : : .: .:..::....
NP_001 SEKPYKCDKCDKFFRRLSTLILHLRIHNGEKLYRCNKCEKVCNRHSSLIQHQKVHTKKKK
300 310 320 330 340 350
370 380 390 400 410
pF1KB8 -FACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVT
: :. : : :. ..:: :. : :::: :..:.:.:.. : : .:. .:. .:
NP_001 LFECKECGKMFSGTANLKIHQNIHSEEKPFKCNKCSKVFGRQSFLIEHQR-IHTGEKPYQ
360 370 380 390 400 410
420 430 440
pF1KB8 PSAIQSETEQLQAAAMAAEAEQQLETIACS
NP_001 CEECGKAFSHRISLTRHKRIHTEDRPYECDQCGKAFSQSAHLAQHERIHTGEKPYTCKTC
420 430 440 450 460 470
449 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:27:02 2016 done: Fri Nov 4 11:27:03 2016
Total Scan time: 6.260 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]