Result of FASTA (omim) for
pFN21AB7730
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7730, 480 aa
1>>>pF1KB7730 480 - 480 aa - 480 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.4072+/-0.000344; mu= -4.4418+/- 0.021
mean_var=287.3304+/-60.261, 0's: 0 Z-trim(123.8): 45 B-trim: 0 in 0/57
Lambda= 0.075663
statistics sampled from 44102 (44147) to 44102 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.518), width: 16
Scan time: 9.860
The best scores are: opt bits E(85289)
NP_116027 (OMIM: 137295,614038,614172,614286) endo ( 480) 3401 384.3 4e-106
NP_001139133 (OMIM: 137295,614038,614172,614286) e ( 480) 3401 384.3 4e-106
NP_001139134 (OMIM: 137295,614038,614172,614286) e ( 466) 2446 280.1 9.4e-75
NP_001002295 (OMIM: 131320,146255) trans-acting T- ( 444) 1362 161.7 3.8e-39
XP_005252500 (OMIM: 131320,146255) PREDICTED: tran ( 444) 1362 161.7 3.8e-39
XP_005252499 (OMIM: 131320,146255) PREDICTED: tran ( 444) 1362 161.7 3.8e-39
NP_002042 (OMIM: 131320,146255) trans-acting T-cel ( 443) 1347 160.1 1.2e-38
XP_016868801 (OMIM: 187500,600576,607941,614429,61 ( 443) 855 106.4 1.7e-22
XP_006716311 (OMIM: 187500,600576,607941,614429,61 ( 443) 855 106.4 1.7e-22
XP_011542120 (OMIM: 187500,600576,607941,614429,61 ( 443) 855 106.4 1.7e-22
XP_005272443 (OMIM: 187500,600576,607941,614429,61 ( 443) 855 106.4 1.7e-22
XP_005272442 (OMIM: 187500,600576,607941,614429,61 ( 443) 855 106.4 1.7e-22
XP_011542119 (OMIM: 187500,600576,607941,614429,61 ( 443) 855 106.4 1.7e-22
NP_001295022 (OMIM: 187500,600576,607941,614429,61 ( 443) 855 106.4 1.7e-22
NP_002043 (OMIM: 187500,600576,607941,614429,61443 ( 442) 846 105.4 3.4e-22
NP_002040 (OMIM: 190685,300367,300835,305371,31405 ( 413) 830 103.6 1.1e-21
XP_011542199 (OMIM: 190685,300367,300835,305371,31 ( 418) 810 101.4 5e-21
XP_011542200 (OMIM: 190685,300367,300835,305371,31 ( 335) 804 100.7 6.6e-21
NP_005248 (OMIM: 187500,217095,600001,601656,61447 ( 595) 768 97.0 1.6e-19
NP_001295023 (OMIM: 187500,600576,607941,614429,61 ( 236) 730 92.5 1.3e-18
XP_006723762 (OMIM: 611496) PREDICTED: transcripti ( 397) 722 91.8 3.7e-18
NP_536721 (OMIM: 611496) transcription factor GATA ( 397) 722 91.8 3.7e-18
>>NP_116027 (OMIM: 137295,614038,614172,614286) endothel (480 aa)
initn: 3401 init1: 3401 opt: 3401 Z-score: 2026.2 bits: 384.3 E(85289): 4e-106
Smith-Waterman score: 3401; 100.0% identity (100.0% similar) in 480 aa overlap (1-480:1-480)
10 20 30 40 50 60
pF1KB7 MEVAPEQPRWMAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 MEVAPEQPRWMAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 ANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFPPTPPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 FSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFPPTPPKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 VSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 ATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 ATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 TATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 TATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 RRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECFEELSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 RRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECFEELSKC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 MQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 MQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
430 440 450 460 470 480
>>NP_001139133 (OMIM: 137295,614038,614172,614286) endot (480 aa)
initn: 3401 init1: 3401 opt: 3401 Z-score: 2026.2 bits: 384.3 E(85289): 4e-106
Smith-Waterman score: 3401; 100.0% identity (100.0% similar) in 480 aa overlap (1-480:1-480)
10 20 30 40 50 60
pF1KB7 MEVAPEQPRWMAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEVAPEQPRWMAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFPPTPPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFPPTPPKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 ATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 TATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 RRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECFEELSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECFEELSKC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 MQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
430 440 450 460 470 480
>>NP_001139134 (OMIM: 137295,614038,614172,614286) endot (466 aa)
initn: 2573 init1: 2417 opt: 2446 Z-score: 1463.0 bits: 280.1 E(85289): 9.4e-75
Smith-Waterman score: 3258; 97.1% identity (97.1% similar) in 480 aa overlap (1-480:1-466)
10 20 30 40 50 60
pF1KB7 MEVAPEQPRWMAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEVAPEQPRWMAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFPPTPPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFPPTPPKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 ATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 TATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLW
::::::::::::::::::::::::::::::::::::::: :::::::
NP_001 TATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRL--------------TTTTTLW
310 320 330 340
370 380 390 400 410 420
pF1KB7 RRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECFEELSKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECFEELSKC
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB7 MQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
410 420 430 440 450 460
>>NP_001002295 (OMIM: 131320,146255) trans-acting T-cell (444 aa)
initn: 1622 init1: 930 opt: 1362 Z-score: 823.8 bits: 161.7 E(85289): 3.8e-39
Smith-Waterman score: 1938; 62.6% identity (78.0% similar) in 486 aa overlap (1-480:1-444)
10 20 30 40 50
pF1KB7 MEVAPEQPRWMAH--PAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGN-
:::. .::::..: :::::.::::.:::::.:.::. :: :.::::.:: .:.:::
NP_001 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFN-IDGQGNH
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 --PYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHH-N
:::.: ..: .. : :.: :.:.::: :::. .::::::::: : :: .
NP_001 VPPYYGNSVRATVQ-RYPPTHH---GSQVCRPPLLHG-SLPWLDGGKALGS----HHTAS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 PWTVSPFSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFP
::..:::::: .: :.:: :::::: :...: .:. :.. ::: ::
NP_001 PWNLSPFSKTSIHH---GSPG-PLSVYPPASSSSLSGG------------HASPHLFTFP
120 130 140 150
180 190 200 210 220 230
pF1KB7 PTPPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLA
:::::.:::::: . .:.:. ::: : ..:. .:::: : .:::.::. :
NP_001 PTPPKDVSPDPSLS---TPGSA---GSA-RQDEKECLKYQVPLPDSMKLESSHSRGSMTA
160 170 180 190 200
240 250 260 270 280 290
pF1KB7 TMGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRE
:.. .::::: ::: ::: .:::::: :...::: ..: :.: :::: .::::
NP_001 LGGASSSTHHPITTYPPYVP----EYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTEGRE
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB7 CVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQT
:::::::.::::::::::::::::::::::::::::::::::::::::::::: ::::::
NP_001 CVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQT
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB7 TTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECF
:::::::::::::::::::::::::::.:::::::::::::::::::.:::: :: . .
NP_001 TTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSL
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB7 EELSKCMQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSS
:.. : .: :. :::. ::. ..:. :::::.:.: ::::.:: :::::: ::::
NP_001 EDFPK-----NSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSSLSFGPHHPSS
390 400 410 420 430
480
pF1KB7 MVTAMG
::::::
NP_001 MVTAMG
440
>>XP_005252500 (OMIM: 131320,146255) PREDICTED: trans-ac (444 aa)
initn: 1622 init1: 930 opt: 1362 Z-score: 823.8 bits: 161.7 E(85289): 3.8e-39
Smith-Waterman score: 1938; 62.6% identity (78.0% similar) in 486 aa overlap (1-480:1-444)
10 20 30 40 50
pF1KB7 MEVAPEQPRWMAH--PAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGN-
:::. .::::..: :::::.::::.:::::.:.::. :: :.::::.:: .:.:::
XP_005 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFN-IDGQGNH
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 --PYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHH-N
:::.: ..: .. : :.: :.:.::: :::. .::::::::: : :: .
XP_005 VPPYYGNSVRATVQ-RYPPTHH---GSQVCRPPLLHG-SLPWLDGGKALGS----HHTAS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 PWTVSPFSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFP
::..:::::: .: :.:: :::::: :...: .:. :.. ::: ::
XP_005 PWNLSPFSKTSIHH---GSPG-PLSVYPPASSSSLSGG------------HASPHLFTFP
120 130 140 150
180 190 200 210 220 230
pF1KB7 PTPPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLA
:::::.:::::: . .:.:. ::: : ..:. .:::: : .:::.::. :
XP_005 PTPPKDVSPDPSLS---TPGSA---GSA-RQDEKECLKYQVPLPDSMKLESSHSRGSMTA
160 170 180 190 200
240 250 260 270 280 290
pF1KB7 TMGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRE
:.. .::::: ::: ::: .:::::: :...::: ..: :.: :::: .::::
XP_005 LGGASSSTHHPITTYPPYVP----EYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTEGRE
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB7 CVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQT
:::::::.::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_005 CVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQT
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB7 TTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECF
:::::::::::::::::::::::::::.:::::::::::::::::::.:::: :: . .
XP_005 TTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSL
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB7 EELSKCMQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSS
:.. : .: :. :::. ::. ..:. :::::.:.: ::::.:: :::::: ::::
XP_005 EDFPK-----NSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSSLSFGPHHPSS
390 400 410 420 430
480
pF1KB7 MVTAMG
::::::
XP_005 MVTAMG
440
>>XP_005252499 (OMIM: 131320,146255) PREDICTED: trans-ac (444 aa)
initn: 1622 init1: 930 opt: 1362 Z-score: 823.8 bits: 161.7 E(85289): 3.8e-39
Smith-Waterman score: 1938; 62.6% identity (78.0% similar) in 486 aa overlap (1-480:1-444)
10 20 30 40 50
pF1KB7 MEVAPEQPRWMAH--PAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGN-
:::. .::::..: :::::.::::.:::::.:.::. :: :.::::.:: .:.:::
XP_005 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFN-IDGQGNH
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 --PYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHH-N
:::.: ..: .. : :.: :.:.::: :::. .::::::::: : :: .
XP_005 VPPYYGNSVRATVQ-RYPPTHH---GSQVCRPPLLHG-SLPWLDGGKALGS----HHTAS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 PWTVSPFSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFP
::..:::::: .: :.:: :::::: :...: .:. :.. ::: ::
XP_005 PWNLSPFSKTSIHH---GSPG-PLSVYPPASSSSLSGG------------HASPHLFTFP
120 130 140 150
180 190 200 210 220 230
pF1KB7 PTPPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLA
:::::.:::::: . .:.:. ::: : ..:. .:::: : .:::.::. :
XP_005 PTPPKDVSPDPSLS---TPGSA---GSA-RQDEKECLKYQVPLPDSMKLESSHSRGSMTA
160 170 180 190 200
240 250 260 270 280 290
pF1KB7 TMGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRE
:.. .::::: ::: ::: .:::::: :...::: ..: :.: :::: .::::
XP_005 LGGASSSTHHPITTYPPYVP----EYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTEGRE
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB7 CVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQT
:::::::.::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_005 CVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQT
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB7 TTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECF
:::::::::::::::::::::::::::.:::::::::::::::::::.:::: :: . .
XP_005 TTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSL
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB7 EELSKCMQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSS
:.. : .: :. :::. ::. ..:. :::::.:.: ::::.:: :::::: ::::
XP_005 EDFPK-----NSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSSLSFGPHHPSS
390 400 410 420 430
480
pF1KB7 MVTAMG
::::::
XP_005 MVTAMG
440
>>NP_002042 (OMIM: 131320,146255) trans-acting T-cell-sp (443 aa)
initn: 1482 init1: 819 opt: 1347 Z-score: 815.0 bits: 160.1 E(85289): 1.2e-38
Smith-Waterman score: 1923; 62.6% identity (77.8% similar) in 486 aa overlap (1-480:1-443)
10 20 30 40 50
pF1KB7 MEVAPEQPRWMAH--PAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGN-
:::. .::::..: :::::.::::.:::::.:.::. :: :.::::.:: .:.:::
NP_002 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFN-IDGQGNH
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 --PYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHH-N
:::.: ..: .. : :.: :.:.::: :::. .::::::::: : :: .
NP_002 VPPYYGNSVRATVQ-RYPPTHH---GSQVCRPPLLHG-SLPWLDGGKALGS----HHTAS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 PWTVSPFSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFP
::..:::::: .: :.:: :::::: :...: .:. :.. ::: ::
NP_002 PWNLSPFSKTSIHH---GSPG-PLSVYPPASSSSLSGG------------HASPHLFTFP
120 130 140 150
180 190 200 210 220 230
pF1KB7 PTPPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLA
:::::.:::::: . .:.:. ::: : ..:. .:::: : .:::.::. :
NP_002 PTPPKDVSPDPSLS---TPGSA---GSA-RQDEKECLKYQVPLPDSMKLESSHSRGSMTA
160 170 180 190 200
240 250 260 270 280 290
pF1KB7 TMGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGRE
:.. .::::: ::: ::: .:::::: :...::: ..: :.: :::: : :::
NP_002 LGGASSSTHHPITTYPPYVP----EYSSGLFPPSSLLGGSPTGFGCKSRPKARS-STGRE
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB7 CVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQT
:::::::.::::::::::::::::::::::::::::::::::::::::::::: ::::::
NP_002 CVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQT
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB7 TTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECF
:::::::::::::::::::::::::::.:::::::::::::::::::.:::: :: . .
NP_002 TTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSL
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB7 EELSKCMQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSS
:.. : .: :. :::. ::. ..:. :::::.:.: ::::.:: :::::: ::::
NP_002 EDFPK-----NSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSSLSFGPHHPSS
390 400 410 420 430
480
pF1KB7 MVTAMG
::::::
NP_002 MVTAMG
440
>>XP_016868801 (OMIM: 187500,600576,607941,614429,614430 (443 aa)
initn: 802 init1: 704 opt: 855 Z-score: 524.7 bits: 106.4 E(85289): 1.7e-22
Smith-Waterman score: 855; 43.4% identity (64.0% similar) in 403 aa overlap (93-472:15-399)
70 80 90 100 110 120
pF1KB7 PAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSPFS
:: . :: .:. .:. .: : :
XP_016 MYQSLAMAANHGPPPG-AYEAGGPGAFMHGAGAASSPVYV-P--
10 20 30 40
130 140 150 160 170
pF1KB7 KTPLHPSAAGG-----PGGPLSVYPGAGGGSGGGSGSSVASLT----PTAAHSGSHLFGF
:: ::.. : :: :. ::.:::.::..:... : : ...:. ..
XP_016 -TPRVPSSVLGLSYLQGGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAY
50 60 70 80 90
180 190 200 210 220 230
pF1KB7 PPTPPKEVSPD---PSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLR
: :: ::: :.:::. . :...:.. : . .. : ..: . . . : :
XP_016 TP-PP--VSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGL--AGREQYG---R
100 110 120 130 140 150
240 250 260 270 280
pF1KB7 PGLATMGTQPATHHPIPTYPSYVPAAAHD---YSSGLFH--PGGFLGGPASSFTPKQRSK
:.: ..: . . :.. ::: . ..: ..: :: ..::. :. .
XP_016 AGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSPVLHSLPG--RANPAARH-PNLVDM
160 170 180 190 200
290 300 310 320 330 340
pF1KB7 ARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRA
. ::::::::::: .::::::::::::::::::::::::: :::::::.:::::.::.
XP_016 FDDFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRV
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB7 GTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSK
: ::::::::::::::::.:.:::::::::.:::.: :::.:.:::::::.:: .: .:
XP_016 GLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNK
270 280 290 300 310 320
410 420 430 440 450 460
pF1KB7 KSKKGAECFEELSKCMQEKSSPFSAAALAG--HMAPVGHLPPFS-HSGHILPTPTPIHPS
.. .: : . :: : :. .. .: :. : .: : :: . .
XP_016 SKTPAAPSGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHS-SSVSQTFSV
330 340 350 360 370 380
470 480
pF1KB7 SSLSFGH-P--HPSSMVTAMG
:..: :: : ::
XP_016 SAMS-GHGPSIHPVLSALKLSPQGYASPVSQSPQTSSKQDSWNSLVLADSHGDIITA
390 400 410 420 430 440
>>XP_006716311 (OMIM: 187500,600576,607941,614429,614430 (443 aa)
initn: 802 init1: 704 opt: 855 Z-score: 524.7 bits: 106.4 E(85289): 1.7e-22
Smith-Waterman score: 855; 43.4% identity (64.0% similar) in 403 aa overlap (93-472:15-399)
70 80 90 100 110 120
pF1KB7 PAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSPFS
:: . :: .:. .:. .: : :
XP_006 MYQSLAMAANHGPPPG-AYEAGGPGAFMHGAGAASSPVYV-P--
10 20 30 40
130 140 150 160 170
pF1KB7 KTPLHPSAAGG-----PGGPLSVYPGAGGGSGGGSGSSVASLT----PTAAHSGSHLFGF
:: ::.. : :: :. ::.:::.::..:... : : ...:. ..
XP_006 -TPRVPSSVLGLSYLQGGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAY
50 60 70 80 90
180 190 200 210 220 230
pF1KB7 PPTPPKEVSPD---PSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLR
: :: ::: :.:::. . :...:.. : . .. : ..: . . . : :
XP_006 TP-PP--VSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGL--AGREQYG---R
100 110 120 130 140 150
240 250 260 270 280
pF1KB7 PGLATMGTQPATHHPIPTYPSYVPAAAHD---YSSGLFH--PGGFLGGPASSFTPKQRSK
:.: ..: . . :.. ::: . ..: ..: :: ..::. :. .
XP_006 AGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSPVLHSLPG--RANPAARH-PNLVDM
160 170 180 190 200
290 300 310 320 330 340
pF1KB7 ARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRA
. ::::::::::: .::::::::::::::::::::::::: :::::::.:::::.::.
XP_006 FDDFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRV
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB7 GTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSK
: ::::::::::::::::.:.:::::::::.:::.: :::.:.:::::::.:: .: .:
XP_006 GLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNK
270 280 290 300 310 320
410 420 430 440 450 460
pF1KB7 KSKKGAECFEELSKCMQEKSSPFSAAALAG--HMAPVGHLPPFS-HSGHILPTPTPIHPS
.. .: : . :: : :. .. .: :. : .: : :: . .
XP_006 SKTPAAPSGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHS-SSVSQTFSV
330 340 350 360 370 380
470 480
pF1KB7 SSLSFGH-P--HPSSMVTAMG
:..: :: : ::
XP_006 SAMS-GHGPSIHPVLSALKLSPQGYASPVSQSPQTSSKQDSWNSLVLADSHGDIITA
390 400 410 420 430 440
>>XP_011542120 (OMIM: 187500,600576,607941,614429,614430 (443 aa)
initn: 802 init1: 704 opt: 855 Z-score: 524.7 bits: 106.4 E(85289): 1.7e-22
Smith-Waterman score: 855; 43.4% identity (64.0% similar) in 403 aa overlap (93-472:15-399)
70 80 90 100 110 120
pF1KB7 PAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSPFS
:: . :: .:. .:. .: : :
XP_011 MYQSLAMAANHGPPPG-AYEAGGPGAFMHGAGAASSPVYV-P--
10 20 30 40
130 140 150 160 170
pF1KB7 KTPLHPSAAGG-----PGGPLSVYPGAGGGSGGGSGSSVASLT----PTAAHSGSHLFGF
:: ::.. : :: :. ::.:::.::..:... : : ...:. ..
XP_011 -TPRVPSSVLGLSYLQGGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAY
50 60 70 80 90
180 190 200 210 220 230
pF1KB7 PPTPPKEVSPD---PSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLR
: :: ::: :.:::. . :...:.. : . .. : ..: . . . : :
XP_011 TP-PP--VSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGL--AGREQYG---R
100 110 120 130 140 150
240 250 260 270 280
pF1KB7 PGLATMGTQPATHHPIPTYPSYVPAAAHD---YSSGLFH--PGGFLGGPASSFTPKQRSK
:.: ..: . . :.. ::: . ..: ..: :: ..::. :. .
XP_011 AGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSPVLHSLPG--RANPAARH-PNLVDM
160 170 180 190 200
290 300 310 320 330 340
pF1KB7 ARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRA
. ::::::::::: .::::::::::::::::::::::::: :::::::.:::::.::.
XP_011 FDDFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRV
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB7 GTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSK
: ::::::::::::::::.:.:::::::::.:::.: :::.:.:::::::.:: .: .:
XP_011 GLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNK
270 280 290 300 310 320
410 420 430 440 450 460
pF1KB7 KSKKGAECFEELSKCMQEKSSPFSAAALAG--HMAPVGHLPPFS-HSGHILPTPTPIHPS
.. .: : . :: : :. .. .: :. : .: : :: . .
XP_011 SKTPAAPSGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHS-SSVSQTFSV
330 340 350 360 370 380
470 480
pF1KB7 SSLSFGH-P--HPSSMVTAMG
:..: :: : ::
XP_011 SAMS-GHGPSIHPVLSALKLSPQGYASPVSQSPQTSSKQDSWNSLVLADSHGDIITA
390 400 410 420 430 440
480 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:17:12 2016 done: Fri Nov 4 09:17:14 2016
Total Scan time: 9.860 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]