Result of FASTA (omim) for
pFN21AB7282
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7282, 705 aa
1>>>pF1KB7282 705 - 705 aa - 705 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.3703+/-0.000409; mu= 1.5671+/- 0.026
mean_var=217.2560+/-44.750, 0's: 0 Z-trim(118.6): 56 B-trim: 548 in 2/58
Lambda= 0.087014
statistics sampled from 31687 (31746) to 31687 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.709), E-opt: 0.2 (0.372), width: 16
Scan time: 12.040
The best scores are: opt bits E(85289)
NP_115880 (OMIM: 603958) transcription factor RFX4 ( 641) 3348 433.5 1.2e-120
NP_998759 (OMIM: 603958) transcription factor RFX4 ( 735) 3348 433.6 1.3e-120
NP_001193620 (OMIM: 603958) transcription factor R ( 744) 3348 433.6 1.4e-120
XP_011533891 (OMIM: 612659,615710) PREDICTED: DNA- ( 892) 1114 153.2 4.2e-36
NP_775831 (OMIM: 612659,615710) DNA-binding protei ( 928) 623 91.6 1.5e-17
XP_016865966 (OMIM: 612659,615710) PREDICTED: DNA- ( 802) 582 86.4 4.8e-16
XP_006716910 (OMIM: 601337) PREDICTED: transcripti ( 492) 549 82.1 5.7e-15
XP_016870491 (OMIM: 601337) PREDICTED: transcripti ( 501) 549 82.1 5.8e-15
XP_016870490 (OMIM: 601337) PREDICTED: transcripti ( 724) 376 60.5 2.7e-08
XP_011516302 (OMIM: 601337) PREDICTED: transcripti ( 745) 376 60.5 2.8e-08
XP_016882597 (OMIM: 142765) PREDICTED: DNA-binding ( 653) 374 60.2 3e-08
NP_602309 (OMIM: 142765) DNA-binding protein RFX2 ( 698) 374 60.2 3.1e-08
NP_002909 (OMIM: 600006) MHC class II regulatory f ( 979) 370 59.8 5.8e-08
XP_011526472 (OMIM: 600006) PREDICTED: MHC class I ( 980) 370 59.8 5.8e-08
XP_011526471 (OMIM: 600006) PREDICTED: MHC class I ( 980) 370 59.8 5.8e-08
XP_011526469 (OMIM: 600006) PREDICTED: MHC class I (1089) 370 59.8 6.4e-08
XP_011526468 (OMIM: 600006) PREDICTED: MHC class I (1089) 370 59.8 6.4e-08
XP_011526467 (OMIM: 600006) PREDICTED: MHC class I (1089) 370 59.8 6.4e-08
NP_001269046 (OMIM: 601337) transcription factor R ( 413) 347 56.7 2.1e-07
XP_016882596 (OMIM: 142765) PREDICTED: DNA-binding ( 678) 348 56.9 2.9e-07
XP_011526474 (OMIM: 142765) PREDICTED: DNA-binding ( 687) 348 56.9 3e-07
XP_011526473 (OMIM: 142765) PREDICTED: DNA-binding ( 723) 348 57.0 3.1e-07
NP_000626 (OMIM: 142765) DNA-binding protein RFX2 ( 723) 348 57.0 3.1e-07
XP_011516303 (OMIM: 601337) PREDICTED: transcripti ( 687) 347 56.8 3.2e-07
NP_002910 (OMIM: 601337) transcription factor RFX3 ( 707) 347 56.8 3.3e-07
XP_011526470 (OMIM: 600006) PREDICTED: MHC class I ( 991) 350 57.3 3.4e-07
NP_001269045 (OMIM: 601337) transcription factor R ( 749) 347 56.8 3.5e-07
NP_602304 (OMIM: 601337) transcription factor RFX3 ( 749) 347 56.8 3.5e-07
XP_016870489 (OMIM: 601337) PREDICTED: transcripti ( 770) 347 56.9 3.6e-07
XP_006716908 (OMIM: 601337) PREDICTED: transcripti ( 770) 347 56.9 3.6e-07
XP_006716907 (OMIM: 601337) PREDICTED: transcripti ( 770) 347 56.9 3.6e-07
XP_011516300 (OMIM: 601337) PREDICTED: transcripti ( 770) 347 56.9 3.6e-07
XP_011516301 (OMIM: 601337) PREDICTED: transcripti ( 770) 347 56.9 3.6e-07
XP_006716906 (OMIM: 601337) PREDICTED: transcripti ( 770) 347 56.9 3.6e-07
XP_006716903 (OMIM: 601337) PREDICTED: transcripti ( 780) 347 56.9 3.6e-07
>>NP_115880 (OMIM: 603958) transcription factor RFX4 iso (641 aa)
initn: 3339 init1: 3339 opt: 3348 Z-score: 2287.0 bits: 433.5 E(85289): 1.2e-120
Smith-Waterman score: 3839; 91.4% identity (93.3% similar) in 641 aa overlap (98-705:1-641)
70 80 90 100 110 120
pF1KB7 NYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFG--KIIRQQFPQLTTRRLGTRGQS
.: :.:: ... . :. .: .:. .
NP_115 MNWAAFGGSEFFIPEGIQIDSRCPLSRNIT
10 20 30
130 140 150 160 170 180
pF1KB7 K-YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNV
. ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 EWYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNV
40 50 60 70 80 90
190 200 210
pF1KB7 KDLNLPASLPEEKVSTFIMMYRTHCQRIL------------------------------G
::::::::::::::::::::::::::::: :
NP_115 KDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLG
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB7 SSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPEN
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB7 LRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 LRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLY
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB7 TMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 TMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVA
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB7 QQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 QQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAM
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB7 KGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 KGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTT
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB7 GAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 GAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSY
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB7 NYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 NYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTP
520 530 540 550 560 570
640 650 660 670 680 690
pF1KB7 RLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 RLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAY
580 590 600 610 620 630
700
pF1KB7 INGEASTGWAK
:::::::::::
NP_115 INGEASTGWAK
640
>>NP_998759 (OMIM: 603958) transcription factor RFX4 iso (735 aa)
initn: 3339 init1: 3339 opt: 3348 Z-score: 2286.1 bits: 433.6 E(85289): 1.3e-120
Smith-Waterman score: 4694; 95.9% identity (95.9% similar) in 735 aa overlap (1-705:1-735)
10 20 30 40 50 60
pF1KB7 MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPE
130 140 150 160 170 180
190 200 210
pF1KB7 FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRIL---------------------------
:::::::::::::::::::::::::::::::::
NP_998 FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 ---GSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 LPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 LPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 QTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 QTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSL
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB7 MRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 MRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTG
490 500 510 520 530 540
520 530 540 550 560 570
pF1KB7 LSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 LSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGY
550 560 570 580 590 600
580 590 600 610 620 630
pF1KB7 TGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 TGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLM
610 620 630 640 650 660
640 650 660 670 680 690
pF1KB7 SSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 SSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFP
670 680 690 700 710 720
700
pF1KB7 GFAYINGEASTGWAK
:::::::::::::::
NP_998 GFAYINGEASTGWAK
730
>>NP_001193620 (OMIM: 603958) transcription factor RFX4 (744 aa)
initn: 3339 init1: 3339 opt: 3348 Z-score: 2286.0 bits: 433.6 E(85289): 1.4e-120
Smith-Waterman score: 4601; 95.9% identity (95.9% similar) in 723 aa overlap (13-705:22-744)
10 20 30 40 50
pF1KB7 MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNR
:::::::::::::::::::::::::::::::::::::::
NP_001 MIKRRAHPGAGGDRTRPRRRRSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 ASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 PQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPR
130 140 150 160 170 180
180 190 200 210
pF1KB7 SKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRIL------------------
::::::::::::::::::::::::::::::::::::::::::
NP_001 SKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHF
190 200 210 220 230 240
220 230 240 250 260
pF1KB7 ------------GSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLD
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLD
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB7 EWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWR
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB7 NVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVK
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB7 VAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL
430 440 450 460 470 480
450 460 470 480 490 500
pF1KB7 HCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPV
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB7 SNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV
550 560 570 580 590 600
570 580 590 600 610 620
pF1KB7 YPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSP
610 620 630 640 650 660
630 640 650 660 670 680
pF1KB7 TSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNS
670 680 690 700 710 720
690 700
pF1KB7 EYEHMQHFPGFAYINGEASTGWAK
::::::::::::::::::::::::
NP_001 EYEHMQHFPGFAYINGEASTGWAK
730 740
>>XP_011533891 (OMIM: 612659,615710) PREDICTED: DNA-bind (892 aa)
initn: 1167 init1: 452 opt: 1114 Z-score: 769.2 bits: 153.2 E(85289): 4.2e-36
Smith-Waterman score: 1150; 35.6% identity (61.5% similar) in 654 aa overlap (25-631:85-727)
10 20 30 40 50
pF1KB7 MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRA--
::.. ..: : ..... .:..
XP_011 GEQGGGEKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAADQYLSQKKTITQIV
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB7 -SKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQF
.: ..: ::::::::: . ::::.:: :: ::::::.:. .:. ::.::: :::.:
XP_011 KDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKF
120 130 140 150 160 170
120 130 140 150 160 170
pF1KB7 PQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETG-KKEVSKQTVAYSP
: ::::::::::.::::::::..:::: :: .:: :: . : . :.::. . :
XP_011 PLLTTRRLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEVDTLIMMY--
180 190 200 210 220 230
180 190 200 210 220
pF1KB7 RSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRT----HCQRILGSSTVVNIVGVCD
... .: :. . :. :... :.. . : .: . ....: :::
XP_011 KTHCQCILD---NAINGNF------EEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCD
240 250 260 270 280
230 240 250 260 270 280
pF1KB7 SILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRF
:::::... ::.:...: .:.:: ::.:::. ..:. .:..::: : . :. . :::
XP_011 SILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRRF
290 300 310 320 330 340
290 300 310 320 330 340
pF1KB7 SQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKL
. :.::::. :: : .: .. . .. .:. : . :::::: .:.: :. : : . .
XP_011 VSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISGSTDTESGI
350 360 370 380 390 400
350 360 370 380 390 400
pF1KB7 ITQ-----LYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMW
:. ..::. ::.... .:..::::::.:.. :.:.. . :::: ::.::: :
XP_011 YTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLKKRAQDFLLKW
410 420 430 440 450 460
410 420 430 440 450
pF1KB7 SCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELM----RAMKG-
: ::.::....::..: ::::::::....:.:.: .:. ... .::. . ::.
XP_011 SFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQFNNDKEQELQNLLDKYMKNS
470 480 490 500 510 520
460 470 480 490 500
pF1KB7 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVE---VPPPSS------PVSN--PS
..: : : . . . : . .:. . :: .: ::: :. . :.
XP_011 DASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYLPLPSSQPGGLGPALHQFPA
530 540 550 560 570 580
510 520 530 540 550
pF1KB7 PEYTGLSTTGAMQSYTWS---LTYTVTTAAGSPAENSQQLPCM-RNTHV------PSSSV
. .. :: :. . .: .. : .: . .: : : : ::
XP_011 GNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQGPMAGRPPSVGPVLSAPSHCS
590 600 610 620 630 640
560 570 580 590 600
pF1KB7 THRIPVYPH--REEHG-YTGSYNYGSYGNQHPHPMQSQYPA-LPHDTAIS---GPLHYAP
:. :.:: . .: :. : :: . .:: .. :: : .. :
XP_011 TYPEPIYPTLPQANHDFYSTSSNYQTVFRAQPHSTSGLYPHHTEHGRCMAWTEQQLSRDF
650 660 670 680 690 700
610 620 630 640 650 660
pF1KB7 YHRSSAQYPFNS-PTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGN
. : : :.:: : : . : :..
XP_011 FSGSCAGSPYNSRPPSSYGPSLQAQDSHNMQFLNTGSFNFLSNTGAASCQGATLPPNSPN
710 720 730 740 750 760
>>NP_775831 (OMIM: 612659,615710) DNA-binding protein RF (928 aa)
initn: 983 init1: 605 opt: 623 Z-score: 435.9 bits: 91.6 E(85289): 1.5e-17
Smith-Waterman score: 1261; 36.8% identity (61.1% similar) in 679 aa overlap (25-631:85-763)
10 20 30 40 50
pF1KB7 MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRA--
::.. ..: : ..... .:..
NP_775 GEQGGGEKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAADQYLSQKKTITQIV
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB7 -SKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQF
.: ..: ::::::::: . ::::.:: :: ::::::.:. .:. ::.::: :::.:
NP_775 KDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKF
120 130 140 150 160 170
120 130 140 150 160 170
pF1KB7 PQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPR
: ::::::::::.::::::::..:::: :: .:: :: . : . :. . : ::
NP_775 PLLTTRRLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLS
180 190 200 210 220 230
180 190 200 210
pF1KB7 SKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILGSS---------------
:: ::::::::... : . . ..::.:.::::.:::: :: ..
NP_775 SKTGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHF
240 250 260 270 280 290
220 230 240 250 260
pF1KB7 ---------------TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLD
....: ::::::::... ::.:...: .:.:: ::.:::. .
NP_775 WQGMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWE
300 310 320 330 340 350
270 280 290 300 310 320
pF1KB7 EWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWR
.:. .:..::: : . :. . ::: . :.::::. :: : .: .. . .. .:. : .
NP_775 QWVVSSLENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIE
360 370 380 390 400 410
330 340 350 360 370
pF1KB7 NVDLNSITKQTLYTMEDSRDEHRKLITQ-----LYQEFDHLLEEQSPIESYIEWLDTMVD
:::::: .:.: :. : : . . :. ..::. ::.... .:..::::::.:.
NP_775 RVDLNSIGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVE
420 430 440 450 460 470
380 390 400 410 420 430
pF1KB7 RCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLY
. :.:.. . :::: ::.::: :: ::.::....::..: ::::::::....:.:.:
NP_775 QRVIKTSKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILL
480 490 500 510 520 530
440 450 460 470 480 490
pF1KB7 LLESLHCQERANELM----RAMKG-EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATS
.:. ... .::. . ::. ..: : : . . . : . .:. .
NP_775 AMETQFNNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESH
540 550 560 570 580 590
500 510 520 530
pF1KB7 VE---VPPPSS------PVSN--PSPEYTGLSTTGAMQSYTWS---LTYTVTTAAGSPAE
:: .: ::: :. . :. . .. :: :. . .: .. : .: .
NP_775 VETTYLPLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGS
600 610 620 630 640 650
540 550 560 570 580
pF1KB7 NSQQLPCM-RNTHV------PSSSVTHRIPVYPH--REEHG-YTGSYNYGSYGNQHPHPM
.: : : : :: :. :.:: . .: :. : :: . .::
NP_775 VINQGPMAGRPPSVGPVLSAPSHCSTYPEPIYPTLPQANHDFYSTSSNYQTVFRAQPHST
660 670 680 690 700 710
590 600 610 620 630 640
pF1KB7 QSQYPA-LPHDTAIS---GPLHYAPYHRSSAQYPFNS-PTSRMEPCLMSSTPRLHPTPVT
.. :: : .. : . : : :.:: : : . : :..
NP_775 SGLYPHHTEHGRCMAWTEQQLSRDFFSGSCAGSPYNSRPPSSYGPSLQAQDSHNMQFLNT
720 730 740 750 760 770
650 660 670 680 690 700
pF1KB7 PRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTG
NP_775 GSFNFLSNTGAASCQGATLPPNSPNGYYGSNINYPESHRLGSMVNQHVSVISSIRSLPPY
780 790 800 810 820 830
>>XP_016865966 (OMIM: 612659,615710) PREDICTED: DNA-bind (802 aa)
initn: 951 init1: 573 opt: 582 Z-score: 409.0 bits: 86.4 E(85289): 4.8e-16
Smith-Waterman score: 1220; 37.6% identity (61.2% similar) in 636 aa overlap (65-631:2-637)
40 50 60 70 80 90
pF1KB7 SLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKND
::::: . ::::.:: :: ::::::.:.
XP_016 MLEENYIVCEGVCLPRCILYAHYLDFCRKEK
10 20 30
100 110 120 130 140 150
pF1KB7 TQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVS
.:. ::.::: :::.:: ::::::::::.::::::::..:::: :: .:: :: . :
XP_016 LEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFS
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB7 ETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILG
. :. . : :: :: ::::::::... : . . ..::.:.::::.:::: ::
XP_016 GSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILD
100 110 120 130 140 150
220 230 240
pF1KB7 SS------------------------------TVVNIVGVCDSILYKAISGVLMPTVLQA
.. ....: ::::::::... ::.:...:
XP_016 NAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB7 LPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASR
.:.:: ::.:::. ..:. .:..::: : . :. . ::: . :.::::. :: : .:
XP_016 MPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIAR
220 230 240 250 260 270
310 320 330 340 350
pF1KB7 TVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQ-----LYQEFDHLLE
.. . .. .:. : . :::::: .:.: :. : : . . :. ..::. ::.
XP_016 PALFDQHVVNSMVSDIERVDLNSIGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLK
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB7 EQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPS
... .:..::::::.:.. :.:.. . :::: ::.::: :: ::.::....::..: :
XP_016 KNATVEAFIEWLDTVVEQRVIKTSKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASS
340 350 360 370 380 390
420 430 440 450 460 470
pF1KB7 FGSFHLIHLMFDDYVLYLLESLHCQERANELM----RAMKG-EGSTAEVREEIILTEAAA
:::::::....:.:.: .:. ... .::. . ::. ..: : :
XP_016 FGSFHLIRMLLDEYILLAMETQFNNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLAN
400 410 420 430 440 450
480 490 500 510 520
pF1KB7 PTPSPVPSFSPAKSATSVE---VPPPSS------PVSN--PSPEYTGLSTTGAMQSYTWS
. . . : . .:. . :: .: ::: :. . :. . .. :: :. .
XP_016 RNKGSMVSSDAVKNESHVETTYLPLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIA
460 470 480 490 500 510
530 540 550 560 570
pF1KB7 ---LTYTVTTAAGSPAENSQQLPCM-RNTHV------PSSSVTHRIPVYPH--REEHG-Y
.: .. : .: . .: : : : :: :. :.:: . .: :
XP_016 GHLMTPPISPAMASRGSVINQGPMAGRPPSVGPVLSAPSHCSTYPEPIYPTLPQANHDFY
520 530 540 550 560 570
580 590 600 610 620
pF1KB7 TGSYNYGSYGNQHPHPMQSQYPA-LPHDTAIS---GPLHYAPYHRSSAQYPFNS-PTSRM
. : :: . .:: .. :: : .. : . : : :.:: : : .
XP_016 STSSNYQTVFRAQPHSTSGLYPHHTEHGRCMAWTEQQLSRDFFSGSCAGSPYNSRPPSSY
580 590 600 610 620 630
630 640 650 660 670 680
pF1KB7 EPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEH
: :..
XP_016 GPSLQAQDSHNMQFLNTGSFNFLSNTGAASCQGATLPPNSPNGYYGSNINYPESHRLGSM
640 650 660 670 680 690
>>XP_006716910 (OMIM: 601337) PREDICTED: transcription f (492 aa)
initn: 596 init1: 299 opt: 549 Z-score: 389.7 bits: 82.1 E(85289): 5.7e-15
Smith-Waterman score: 568; 35.0% identity (66.7% similar) in 303 aa overlap (168-469:108-390)
140 150 160 170 180 190
pF1KB7 SQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKL-GTLLPEFPNVKDLNLPASLPEE
::: . :: . : :..... . ::.
XP_006 LYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIE--SRLPKA
80 90 100 110 120 130
200 210 220 230 240 250
pF1KB7 KVSTFIMMYRTHCQRILGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKF
:. :. :.. .... . :: .:.:. .:.: ::. .:..:::.::.:
XP_006 KLITL-------CKH----ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNF
140 150 160 170 180
260 270 280 290 300 310
pF1KB7 AKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQM
::.:. ::. :....:. . . : :.: ::: :::::: ::.:.:..... ::
XP_006 AKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQM
190 200 210 220 230 240
320 330 340 350 360 370
pF1KB7 LEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVD
: : ::. .. .:. .. . :.. .. .: .: :..:: .:.. :::...
XP_006 LSDLNRVDFANVQEQASWVCQC--DDN--MVQRLETDFKMTLQQQSTLEQWAAWLDNVMM
250 260 270 280 290 300
380 390 400 410 420 430
pF1KB7 RCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLY
. ..: : :. :.:.:::: :: ... ::::.::.:: ::::::::.:..:.:..:
XP_006 Q-ALKPYEGRP-SFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
310 320 330 340 350
440 450 460 470 480 490
pF1KB7 LLESLHCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPP
:.: : ..: :. :: . .. .. :.
XP_006 LVEHRVAQA-TGETPIAVMGETNLVDEKNTPIMELFISKLLNFGDLNAVSPGNLDKDEGS
360 370 380 390 400 410
500 510 520 530 540 550
pF1KB7 PSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVT
XP_006 EVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPSLLNPIHSEHIVTSTQ
420 430 440 450 460 470
>>XP_016870491 (OMIM: 601337) PREDICTED: transcription f (501 aa)
initn: 596 init1: 299 opt: 549 Z-score: 389.6 bits: 82.1 E(85289): 5.8e-15
Smith-Waterman score: 568; 35.0% identity (66.7% similar) in 303 aa overlap (168-469:117-399)
140 150 160 170 180 190
pF1KB7 SQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKL-GTLLPEFPNVKDLNLPASLPEE
::: . :: . : :..... . ::.
XP_016 LYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIE--SRLPKA
90 100 110 120 130 140
200 210 220 230 240 250
pF1KB7 KVSTFIMMYRTHCQRILGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKF
:. :. :.. .... . :: .:.:. .:.: ::. .:..:::.::.:
XP_016 KLITL-------CKH----ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNF
150 160 170 180 190
260 270 280 290 300 310
pF1KB7 AKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQM
::.:. ::. :....:. . . : :.: ::: :::::: ::.:.:..... ::
XP_016 AKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQM
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB7 LEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVD
: : ::. .. .:. .. . :.. .. .: .: :..:: .:.. :::...
XP_016 LSDLNRVDFANVQEQASWVCQC--DDN--MVQRLETDFKMTLQQQSTLEQWAAWLDNVMM
260 270 280 290 300
380 390 400 410 420 430
pF1KB7 RCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLY
. ..: : :. :.:.:::: :: ... ::::.::.:: ::::::::.:..:.:..:
XP_016 Q-ALKPYEGRP-SFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
310 320 330 340 350 360
440 450 460 470 480 490
pF1KB7 LLESLHCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPP
:.: : ..: :. :: . .. .. :.
XP_016 LVEHRVAQA-TGETPIAVMGETNLVDEKNTPIMELFISKLLNFGDLNAVSPGNLDKDEGS
370 380 390 400 410 420
500 510 520 530 540 550
pF1KB7 PSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVT
XP_016 EVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPSLLNPIHSEHIVTSTQ
430 440 450 460 470 480
>>XP_016870490 (OMIM: 601337) PREDICTED: transcription f (724 aa)
initn: 963 init1: 364 opt: 376 Z-score: 269.9 bits: 60.5 E(85289): 2.7e-08
Smith-Waterman score: 841; 35.4% identity (58.8% similar) in 497 aa overlap (48-457:142-631)
20 30 40 50 60 70
pF1KB7 IERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHST---PATLQWLEENYEIAEG
::. : :.: ::::::: .::: :::
XP_016 MVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATLQWLLDNYETAEG
120 130 140 150 160 170
80 90 100 110 120 130
pF1KB7 VCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAV
: .:::.:: ::: :... .:::::::::.::. : : ::::::::.:::::::: :
XP_016 VSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRV
180 190 200 210 220 230
140 150 160
pF1KB7 KESS----------------------QYYDVMYSKKGAA-WVSETGKKE---VSKQTVAY
: .: : : : . :.: . .:.. : . ..:
XP_016 KPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQ
240 250 260 270 280 290
170 180 190 200 210
pF1KB7 SPRSKL----GTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRIL-----------
: . . . :::: .:. .:: . : .... .:: ::. ::
XP_016 SQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLI
300 310 320 330 340 350
220 230
pF1KB7 -----------------GSS--------------------------TVVNIVGVCDSILY
:.. .... . :: .:
XP_016 EKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMY
360 370 380 390 400 410
240 250 260 270 280 290
pF1KB7 KAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQIL
.:. .:.: ::. .:..:::.::.:::.:. ::. :....:. . . : :.: :
XP_016 QALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTL
420 430 440 450 460 470
300 310 320 330 340 350
pF1KB7 RRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQL
:: :::::: ::.:.:..... ::: : ::. .. .:. .. . :.. .. .:
XP_016 RRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ--CDDN--MVQRL
480 490 500 510 520
360 370 380 390 400 410
pF1KB7 YQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIR
.: :..:: .:.. :::... . ..: : :. :.:.:::: :: ... :::
XP_016 ETDFKMTLQQQSTLEQWAAWLDNVMMQ-ALKPYEGRP-SFPKAARQFLLKWSFYSSMVIR
530 540 550 560 570 580
420 430 440 450 460 470
pF1KB7 DMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVREEIILT
:.::.:: ::::::::.:..:.:..::.: . . ..: :. ::
XP_016 DLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAQATGETPIAVMGEFGDLNAVSPGNLD
590 600 610 620 630 640
480 490 500 510 520 530
pF1KB7 EAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTT
XP_016 KDEGSEVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPSLLNPIHSEHI
650 660 670 680 690 700
>>XP_011516302 (OMIM: 601337) PREDICTED: transcription f (745 aa)
initn: 949 init1: 367 opt: 376 Z-score: 269.7 bits: 60.5 E(85289): 2.8e-08
Smith-Waterman score: 845; 34.8% identity (58.7% similar) in 509 aa overlap (48-469:142-643)
20 30 40 50 60 70
pF1KB7 IERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHST---PATLQWLEENYEIAEG
::. : :.: ::::::: .::: :::
XP_011 MVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATLQWLLDNYETAEG
120 130 140 150 160 170
80 90 100 110 120 130
pF1KB7 VCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAV
: .:::.:: ::: :... .:::::::::.::. : : ::::::::.:::::::: :
XP_011 VSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRV
180 190 200 210 220 230
140 150 160
pF1KB7 KESS----------------------QYYDVMYSKKGAA-WVSETGKKE---VSKQTVAY
: .: : : : . :.: . .:.. : . ..:
XP_011 KPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQ
240 250 260 270 280 290
170 180 190 200 210
pF1KB7 SPRSKL----GTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRIL-----------
: . . . :::: .:. .:: . : .... .:: ::. ::
XP_011 SQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLI
300 310 320 330 340 350
220 230
pF1KB7 -----------------GSS--------------------------TVVNIVGVCDSILY
:.. .... . :: .:
XP_011 EKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMY
360 370 380 390 400 410
240 250 260 270 280 290
pF1KB7 KAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQIL
.:. .:.: ::. .:..:::.::.:::.:. ::. :....:. . . : :.: :
XP_011 QALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTL
420 430 440 450 460 470
300 310 320 330 340 350
pF1KB7 RRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQL
:: :::::: ::.:.:..... ::: : ::. .. .:. .. . :.. .. .:
XP_011 RRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ--CDDN--MVQRL
480 490 500 510 520
360 370 380 390 400 410
pF1KB7 YQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIR
.: :..:: .:.. :::... . ..: : :. :.:.:::: :: ... :::
XP_011 ETDFKMTLQQQSTLEQWAAWLDNVMMQ-ALKPYEGRP-SFPKAARQFLLKWSFYSSMVIR
530 540 550 560 570 580
420 430 440 450 460 470
pF1KB7 DMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVREEIILT
:.::.:: ::::::::.:..:.:..::.: . . ..: :. :: . .. .. :.
XP_011 DLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAQATGETPIAVMGETNLVDEKNTPIME
590 600 610 620 630 640
480 490 500 510 520 530
pF1KB7 EAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTT
XP_011 LFISKLLNFGDLNAVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKTELSQAFPVGCM
650 660 670 680 690 700
705 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:34:06 2016 done: Fri Nov 4 06:34:08 2016
Total Scan time: 12.040 Total Display time: 0.190
Function used was FASTA [36.3.4 Apr, 2011]