Result of FASTA (omim) for
pFN21AB7188
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7188, 462 aa
1>>>pF1KB7188 462 - 462 aa - 462 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3264+/-0.000323; mu= 13.8840+/- 0.020
mean_var=108.0652+/-21.763, 0's: 0 Z-trim(118.2): 9 B-trim: 0 in 0/54
Lambda= 0.123376
statistics sampled from 31003 (31012) to 31003 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.364), width: 16
Scan time: 9.450
The best scores are: opt bits E(85289)
NP_000184 (OMIM: 142945,147250,269160,600725,61163 ( 462) 3084 559.5 6.6e-159
XP_011514782 (OMIM: 142945,147250,269160,600725,61 ( 375) 2422 441.7 1.7e-123
XP_011514781 (OMIM: 142945,147250,269160,600725,61 ( 375) 2422 441.7 1.7e-123
NP_002172 (OMIM: 112500,600726,607778) indian hedg ( 411) 1342 249.4 1.3e-65
NP_066382 (OMIM: 233420,605423,607080) desert hedg ( 396) 1206 225.2 2.5e-58
XP_016874869 (OMIM: 233420,605423,607080) PREDICTE ( 349) 823 157.0 7.4e-38
XP_016874870 (OMIM: 233420,605423,607080) PREDICTE ( 282) 746 143.2 8.4e-34
NP_001297391 (OMIM: 142945,147250,269160,600725,61 ( 179) 602 117.5 3.1e-26
>>NP_000184 (OMIM: 142945,147250,269160,600725,611638) s (462 aa)
initn: 3084 init1: 3084 opt: 3084 Z-score: 2973.9 bits: 559.5 E(85289): 6.6e-159
Smith-Waterman score: 3084; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB7 MLLLARCLLLVLVSSLLVCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MLLLARCLLLVLVSSLLVCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 RYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 FLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGPPSGGALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGPPSGGALG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PRALFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PRALFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 ASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVALTAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVALTAPGA
370 380 390 400 410 420
430 440 450 460
pF1KB7 ADAPGAGATAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
::::::::::::::::::::::::::::::::::::::::::
NP_000 ADAPGAGATAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
430 440 450 460
>>XP_011514782 (OMIM: 142945,147250,269160,600725,611638 (375 aa)
initn: 2422 init1: 2422 opt: 2422 Z-score: 2338.3 bits: 441.7 E(85289): 1.7e-123
Smith-Waterman score: 2422; 99.5% identity (100.0% similar) in 364 aa overlap (99-462:12-375)
70 80 90 100 110 120
pF1KB7 NSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGVKLRVTEGW
..::::::::::::::::::::::::::::
XP_011 MLSLFPSPGPGSSRCKDKLNALAISVMNQWPGVKLRVTEGW
10 20 30 40
130 140 150 160 170 180
pF1KB7 DEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAE
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB7 NSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDGA
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB7 KKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGPPSGGALGPRALFASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGPPSGGALGPRALFASR
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB7 VRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVLASCYAVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVLASCYAVIE
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB7 EHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVALTAPGAADAPGAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVALTAPGAADAPGAGA
290 300 310 320 330 340
430 440 450 460
pF1KB7 TAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
::::::::::::::::::::::::::::::::::
XP_011 TAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
350 360 370
>>XP_011514781 (OMIM: 142945,147250,269160,600725,611638 (375 aa)
initn: 2422 init1: 2422 opt: 2422 Z-score: 2338.3 bits: 441.7 E(85289): 1.7e-123
Smith-Waterman score: 2422; 99.5% identity (100.0% similar) in 364 aa overlap (99-462:12-375)
70 80 90 100 110 120
pF1KB7 NSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGVKLRVTEGW
..::::::::::::::::::::::::::::
XP_011 MLSLFPSPGPGSSRCKDKLNALAISVMNQWPGVKLRVTEGW
10 20 30 40
130 140 150 160 170 180
pF1KB7 DEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAE
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB7 NSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDGA
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB7 KKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGPPSGGALGPRALFASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGPPSGGALGPRALFASR
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB7 VRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVLASCYAVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVLASCYAVIE
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB7 EHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVALTAPGAADAPGAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVALTAPGAADAPGAGA
290 300 310 320 330 340
430 440 450 460
pF1KB7 TAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
::::::::::::::::::::::::::::::::::
XP_011 TAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
350 360 370
>>NP_002172 (OMIM: 112500,600726,607778) indian hedgehog (411 aa)
initn: 1657 init1: 1275 opt: 1342 Z-score: 1298.9 bits: 249.4 E(85289): 1.3e-65
Smith-Waterman score: 1583; 58.9% identity (74.2% similar) in 453 aa overlap (7-458:13-407)
10 20 30 40 50
pF1KB7 MLLLARCLLLVLVSSLLVCSGLACGPGRGFG-KRRHPKKLTPLAYKQFIPNVAE
::.:.:. :.: .. .::::: : .:: :.::.::::::: ::: :
NP_002 MSPARLRPRLHFCLVLLLL--LVVPAAWGCGPGRVVGSRRRPPRKLVPLAYKQFSPNVPE
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 KTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISV
:::::::::::::.:.:::::::::::::::::::::::::::::::::::.::.:::::
NP_002 KTLGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDRLNSLAISV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV
::::::::::::::::::::::::::::::::::::::::::.:::.:::::::::::::
NP_002 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 YYESKAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRL
:::::::.:::::.:.:.:::.:::::..: :.::.:. .. . ::::::: ..:
NP_002 YYESKAHVHCSVKSEHSAAAKTGGCFPAGAQVRLESGARVALSAVRPGDRVLAMGEDGSP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 LYSDFLTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGP
.:: : ::::. ..: ::::..: .:: :: :::::.: :. : :: :
NP_002 TFSDVLIFLDREPHRLRAFQVIETQDPPRRLALTPAHLLFTA---DNHT-EPAARF----
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 PSGGALGPRALFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGT
:: :::.:.::: : .:: : : :: : .:. .. : ::::::: .::
NP_002 --------RATFASHVQPGQYV-LVAGVPG---LQPARVAAVS-THVALGAYAPLTKHGT
300 310 320 330
360 370 380 390 400 410
pF1KB7 ILINRVLASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRV
.... :.:::.:.. .: :. :: :.:: :.:
NP_002 LVVEDVVASCFAAVADHHLAQLAFWPLRLFHSL---------------------------
340 350 360 370
420 430 440 450 460
pF1KB7 ALTAPGAADAPGAGATAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
: :. .:: :.::: ::::..: ::. ..:::::.
NP_002 ---AWGSW-TPGE----GVHWYPQLLYRLGRLLLEEGSFHPLGMSGAGS
380 390 400 410
>>NP_066382 (OMIM: 233420,605423,607080) desert hedgehog (396 aa)
initn: 1421 init1: 1126 opt: 1206 Z-score: 1168.3 bits: 225.2 E(85289): 2.5e-58
Smith-Waterman score: 1474; 54.4% identity (72.9% similar) in 450 aa overlap (1-447:1-395)
10 20 30 40 50
pF1KB7 MLLLARCLLLVLVSSLLVCSGLACGPGRG-FGKRRHPKK-LTPLAYKQFIPNVAEKTLGA
: ::. : : .. ::. . .:::::: :.::. .: :.:: ::::.:.: :.::::
NP_066 MALLTNLLPLCCLA-LLALPAQSCGPGRGPVGRRRYARKQLVPLLYKQFVPGVPERTLGA
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 SGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWP
:: ::...:.::::..:.::::::::::::::.:::::::.:::...:::::.:::.::
NP_066 SGPAEGRVARGSERFRDLVPNYNPDIIFKDEENSGADRLMTERCKERVNALAIAVMNMWP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 GVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESK
::.:::::::::::::...::::::::.:::::::::.:::.:::::::::::::::::.
NP_066 GVRLRVTEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWVYYESR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 AHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDF
:.: ::::.::.:...::::::.:::.: .: : ...: :: ::::: .::.. .
NP_066 NHVHVSVKADNSLAVRAGGCFPGNATVRLWSGERKGLRELHRGDWVLAADASGRVVPTPV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 LTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGP-PSGG
: ::::: . : ..::. : ..:::: ::.:.: :: :. :
NP_066 LLFLDRDLQRRASFVAVETEWPPRKLLLTPWHLVFAA---------------RGPAPAPG
240 250 260 270 280
300 310 320 330 340 350
pF1KB7 ALGPRALFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILIN
..: .:: :.: :. : . : : :: : :. :::.:..:::::.::.:.:
NP_066 DFAP--VFARRLRAGDSVLA----PGGDALRPARVARVA-REEAVGVFAPLTAHGTLLVN
290 300 310 320 330
360 370 380 390 400 410
pF1KB7 RVLASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVALTA
::::::::.: :.::::::::.:: ::: : :
NP_066 DVLASCYAVLESHQWAHRAFAPLRLLHALGALL---------------------------
340 350 360 370
420 430 440 450 460
pF1KB7 PGAADAPGAGATAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
::.: : .:.::::.:::... ::
NP_066 PGGAVQP-----TGMHWYSRLLYRLAEELLG
380 390
>>XP_016874869 (OMIM: 233420,605423,607080) PREDICTED: d (349 aa)
initn: 1050 init1: 807 opt: 823 Z-score: 800.6 bits: 157.0 E(85289): 7.4e-38
Smith-Waterman score: 1091; 52.5% identity (70.3% similar) in 354 aa overlap (95-447:50-348)
70 80 90 100 110 120
pF1KB7 KISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGVKLRV
:: ..::::...:::::.:::.::::.:::
XP_016 SLPQVQASSRSFFSSSPLSPCRGLPRSAQGDR-YSQRCKERVNALAIAVMNMWPGVRLRV
20 30 40 50 60 70
130 140 150 160 170 180
pF1KB7 TEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCS
::::::::::...::::::::.:::::::::.:::.:::::::::::::::::. :.: :
XP_016 TEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWVYYESRNHVHVS
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB7 VKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDR
:::.::.:...::::::.:::.: .: : ...: :: ::::: .::.. . : ::::
XP_016 VKADNSLAVRAGGCFPGNATVRLWSGERKGLRELHRGDWVLAADASGRVVPTPVLLFLDR
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB7 DDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSATGEPEASSGSGP-PSGGALGPRA
: . : ..::. : ..:::: ::.:.: :: :. : ..:
XP_016 DLQRRASFVAVETEWPPRKLLLTPWHLVFAA---------------RGPAPAPGDFAP--
200 210 220 230 240
310 320 330 340 350 360
pF1KB7 LFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVLASC
.:: :.: :. : . : : :: : :. :::.:..:::::.::.:.: :::::
XP_016 VFARRLRAGDSVLA----PGGDALRPARVARVA-REEAVGVFAPLTAHGTLLVNDVLASC
250 260 270 280 290
370 380 390 400 410 420
pF1KB7 YAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVALTAPGAADA
:::.: :.::::::::.:: ::: : : ::.:
XP_016 YAVLESHQWAHRAFAPLRLLHALGALL---------------------------PGGAVQ
300 310 320
430 440 450 460
pF1KB7 PGAGATAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
: .:.::::.:::... ::
XP_016 P-----TGMHWYSRLLYRLAEELLG
330 340
>>XP_016874870 (OMIM: 233420,605423,607080) PREDICTED: d (282 aa)
initn: 976 init1: 733 opt: 746 Z-score: 727.8 bits: 143.2 E(85289): 8.4e-34
Smith-Waterman score: 1014; 51.9% identity (69.0% similar) in 335 aa overlap (114-447:1-281)
90 100 110 120 130 140
pF1KB7 IIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEG
::.::::.:::::::::::::...::::::
XP_016 MNMWPGVRLRVTEGWDEDGHHAQDSLHYEG
10 20 30
150 160 170 180 190 200
pF1KB7 RAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFPGSA
::.:::::::::.:::.:::::::::::::::::. :.: ::::.::.:...::::::.:
XP_016 RALDITTSDRDRNKYGLLARLAVEAGFDWVYYESRNHVHVSVKADNSLAVRAGGCFPGNA
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB7 TVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDGAKKVFYVIETREPRER
::.: .: : ...: :: ::::: .::.. . : ::::: . : ..::. : ..
XP_016 TVRLWSGERKGLRELHRGDWVLAADASGRVVPTPVLLFLDRDLQRRASFVAVETEWPPRK
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB7 LLLTAAHLLFVAPHNDSATGEPEASSGSGP-PSGGALGPRALFASRVRPGQRVYVVAERD
:::: ::.:.: :: :. : ..: .:: :.: :. : .
XP_016 LLLTPWHLVFAA---------------RGPAPAPGDFAP--VFARRLRAGDSVLA----P
160 170 180
330 340 350 360 370 380
pF1KB7 GDRRLLPAAVHSVTLSEEAAGAYAPLTAQGTILINRVLASCYAVIEEHSWAHRAFAPFRL
: : :: : :. :::.:..:::::.::.:.: ::::::::.: :.::::::::.::
XP_016 GGDALRPARVARVA-REEAVGVFAPLTAHGTLLVNDVLASCYAVLESHQWAHRAFAPLRL
190 200 210 220 230 240
390 400 410 420 430 440
pF1KB7 AHALLAALAPARTDRGGDSGGGDRGGGGGRVALTAPGAADAPGAGATAGIHWYSQLLYQI
::: : : ::.: : .:.::::.:::..
XP_016 LHALGALL---------------------------PGGAVQP-----TGMHWYSRLLYRL
250 260 270
450 460
pF1KB7 GTWLLDSEALHPLGMAVKSS
. ::
XP_016 AEELLG
280
>>NP_001297391 (OMIM: 142945,147250,269160,600725,611638 (179 aa)
initn: 621 init1: 602 opt: 602 Z-score: 592.1 bits: 117.5 E(85289): 3.1e-26
Smith-Waterman score: 602; 97.8% identity (100.0% similar) in 89 aa overlap (99-187:12-100)
70 80 90 100 110 120
pF1KB7 NSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGVKLRVTEGW
..::::::::::::::::::::::::::::
NP_001 MLSLFPSPGPGSSRCKDKLNALAISVMNQWPGVKLRVTEGW
10 20 30 40
130 140 150 160 170 180
pF1KB7 DEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAG
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB7 NSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDGA
NP_001 KERKPLLRDTRYRASRGCSPAPPGRGADFSFRVDGAKSLCKMYAWWLLPASLMTKCISIP
110 120 130 140 150 160
462 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 05:43:45 2016 done: Fri Nov 4 05:43:47 2016
Total Scan time: 9.450 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]