Result of FASTA (omim) for
pFN21AB7097
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7097, 194 aa
1>>>pF1KB7097 194 - 194 aa - 194 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4275+/-0.000404; mu= 18.1501+/- 0.025
mean_var=84.8266+/-20.552, 0's: 0 Z-trim(112.1): 112 B-trim: 1293 in 1/49
Lambda= 0.139254
statistics sampled from 20708 (20862) to 20708 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.245), width: 16
Scan time: 5.440
The best scores are: opt bits E(85289)
NP_003691 (OMIM: 608494) olfactory receptor 2D2 [H ( 308) 653 141.2 1.6e-33
NP_036501 (OMIM: 608497) olfactory receptor 2F1 [H ( 317) 631 136.8 3.5e-32
XP_011514322 (OMIM: 608497) PREDICTED: olfactory r ( 317) 631 136.8 3.5e-32
XP_011514321 (OMIM: 608497) PREDICTED: olfactory r ( 317) 631 136.8 3.5e-32
NP_009091 (OMIM: 600578) olfactory receptor 2H2 [H ( 312) 622 135.0 1.2e-31
NP_001005216 (OMIM: 615016,615082) olfactory recep ( 311) 604 131.3 1.5e-30
NP_835462 (OMIM: 608493) olfactory receptor 10A5 [ ( 317) 603 131.1 1.7e-30
NP_001001957 (OMIM: 616729) olfactory receptor 2W3 ( 314) 597 129.9 4e-30
XP_011513214 (OMIM: 600578) PREDICTED: olfactory r ( 300) 592 128.9 7.8e-30
NP_001005191 (OMIM: 611538) olfactory receptor 7D4 ( 312) 583 127.1 2.8e-29
XP_011520809 (OMIM: 603232) PREDICTED: olfactory r ( 312) 578 126.1 5.6e-29
NP_036492 (OMIM: 603232) olfactory receptor 1F1 [H ( 312) 578 126.1 5.6e-29
XP_011520808 (OMIM: 603232) PREDICTED: olfactory r ( 322) 578 126.1 5.7e-29
NP_003687 (OMIM: 608495) olfactory receptor 6A2 [H ( 327) 571 124.7 1.5e-28
NP_001005487 (OMIM: 611677) olfactory receptor 13G ( 307) 566 123.7 2.9e-28
NP_002539 (OMIM: 164342) olfactory receptor 1D2 [H ( 312) 543 119.1 7.3e-27
NP_001004703 (OMIM: 614273) olfactory receptor 4C4 ( 309) 535 117.5 2.2e-26
NP_003688 (OMIM: 608492) olfactory receptor 5F1 [H ( 314) 521 114.7 1.6e-25
NP_006628 (OMIM: 608496) olfactory receptor 5I1 [H ( 314) 519 114.3 2.1e-25
NP_001004729 (OMIM: 615702) olfactory receptor 5AN ( 311) 513 113.1 4.8e-25
NP_689643 (OMIM: 611267) olfactory receptor 51E1 [ ( 318) 334 77.1 3.2e-14
NP_110401 (OMIM: 611268) olfactory receptor 51E2 [ ( 320) 323 74.9 1.5e-13
>>NP_003691 (OMIM: 608494) olfactory receptor 2D2 [Homo (308 aa)
initn: 671 init1: 541 opt: 653 Z-score: 722.7 bits: 141.2 E(85289): 1.6e-33
Smith-Waterman score: 653; 54.3% identity (78.5% similar) in 186 aa overlap (1-186:118-301)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
::::::::::.:::: :::::::. ::
NP_003 RKKVIAFTLCAARLLFFLIFGCTQCALLAVMSYDRYVAICNPLRYPNIMTWKVCVQLATG
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
::: : :...: ...:::::. : : ::::: ..: :: .:: ....:: . ::
NP_003 SWTSGILVSVVDTTFILRLPYRGSNSIAHFFCEAPALLILASTDTHASEMAIFLMGVVIL
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
. :. :.::::..:........: : ::::::.::: :: ::.::::. ::.:::
NP_003 LIPVFLILVSYGRIIVTVVKMKSTVGSLKAFSTCGSHLMVVILFYGSAIITYMTPKSS--
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
..:.: . .::. .::::::::.::: .::.:::.
NP_003 KQQEKSVSVFYAIVTPMLNPLIYSLRNKDVKAALRKVATRNFP
270 280 290 300
>>NP_036501 (OMIM: 608497) olfactory receptor 2F1 [Homo (317 aa)
initn: 655 init1: 620 opt: 631 Z-score: 698.7 bits: 136.8 E(85289): 3.5e-32
Smith-Waterman score: 631; 50.0% identity (77.1% similar) in 192 aa overlap (1-192:118-309)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
:.::::::.: ::: :: .: ::::
NP_036 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
::. : . . :.... ..::.: . :.:. ::.:.:.::::.:: :.:.:... . .:
NP_036 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
. :.::::.:: .:...::.::: :::.::: ::.::: ::.: .: :: :. :.:
NP_036 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQPHSSPS
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
:.:.. .::. ..:::::.::.::: ::::: .. : : :
NP_036 VLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
270 280 290 300 310
>>XP_011514322 (OMIM: 608497) PREDICTED: olfactory recep (317 aa)
initn: 655 init1: 620 opt: 631 Z-score: 698.7 bits: 136.8 E(85289): 3.5e-32
Smith-Waterman score: 631; 50.0% identity (77.1% similar) in 192 aa overlap (1-192:118-309)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
:.::::::.: ::: :: .: ::::
XP_011 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
::. : . . :.... ..::.: . :.:. ::.:.:.::::.:: :.:.:... . .:
XP_011 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
. :.::::.:: .:...::.::: :::.::: ::.::: ::.: .: :: :. :.:
XP_011 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQPHSSPS
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
:.:.. .::. ..:::::.::.::: ::::: .. : : :
XP_011 VLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
270 280 290 300 310
>>XP_011514321 (OMIM: 608497) PREDICTED: olfactory recep (317 aa)
initn: 655 init1: 620 opt: 631 Z-score: 698.7 bits: 136.8 E(85289): 3.5e-32
Smith-Waterman score: 631; 50.0% identity (77.1% similar) in 192 aa overlap (1-192:118-309)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
:.::::::.: ::: :: .: ::::
XP_011 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
::. : . . :.... ..::.: . :.:. ::.:.:.::::.:: :.:.:... . .:
XP_011 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
. :.::::.:: .:...::.::: :::.::: ::.::: ::.: .: :: :. :.:
XP_011 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQPHSSPS
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
:.:.. .::. ..:::::.::.::: ::::: .. : : :
XP_011 VLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
270 280 290 300 310
>>NP_009091 (OMIM: 600578) olfactory receptor 2H2 [Homo (312 aa)
initn: 622 init1: 622 opt: 622 Z-score: 689.0 bits: 135.0 E(85289): 1.2e-31
Smith-Waterman score: 622; 49.2% identity (76.4% similar) in 191 aa overlap (1-191:116-306)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
:..:::::.:.::.: :. ..: :: .
NP_009 PKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASV
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
.:. : . ..:.. :.:::: :... : ::. ...::.: :: :.. . .: .:::
NP_009 AWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSCEDTSYNEIQVAVASVFIL
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
: :: :.::::. : :.:::.:..::::::.:::::: :: ::..:.:..:. ::. .
NP_009 VVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
.:. : . :::. .: ::::::.::: :: :.:: : ::
NP_009 QERGKFFGLFYAVGTPSLNPLIYTLRNKEVTRAFRRLLGKEMGLTQS
270 280 290 300 310
>>NP_001005216 (OMIM: 615016,615082) olfactory receptor (311 aa)
initn: 619 init1: 598 opt: 604 Z-score: 669.5 bits: 131.3 E(85289): 1.5e-30
Smith-Waterman score: 604; 45.5% identity (77.2% similar) in 189 aa overlap (1-188:121-308)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
::::::.:.:.::.: ..: . : ::..
NP_001 PEKTISYAGCMIQLYFVLALGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCHLLAVA
100 110 120 130 140 150
40 50 60 70 80
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQV-VIFAACMFI
::. : . .: :. . .:.:: :...:::::. ..:::.:.:: .:.. ..... .:.
NP_001 SWVSGFTNSALHSSFTFWVPLCGHRQVDHFFCEVPALLRLSCVDTHVNELTLMITSSIFV
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB7 LVGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRH
:. :: :.:.::. :. ::::.:: : .:.:.::..:: .:.::: :. ::. : : .
NP_001 LI-PLILILTSYGAIVRAILRMQSTTGLQKVFGTCGAHLMAVSLFFIPAMCMYLQPPSGN
220 230 240 250 260
150 160 170 180 190
pF1KB7 PEEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
..: : . :::. .: ::::::.::: :.::..: .
NP_001 SQDQGKFIALFYTVVTPSLNPLIYTLRNKVVRGAVKRLMGWE
270 280 290 300 310
>>NP_835462 (OMIM: 608493) olfactory receptor 10A5 [Homo (317 aa)
initn: 641 init1: 595 opt: 603 Z-score: 668.3 bits: 131.1 E(85289): 1.7e-30
Smith-Waterman score: 603; 48.4% identity (76.3% similar) in 190 aa overlap (1-190:119-308)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
:.:::::::: ::.: .::. .. :: .
NP_835 QDTTISFLGCATQMYFFFFFGVAECFLLATMAYDRYVAICSPLHYPVIMNQRTRAKLAAA
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
:: : .: :... .. .:::: ..:::::. ::.:.:::: : .. ... ....
NP_835 SWFPGFPVATVQTTWLFSFPFCGTNKVNHFFCDSPPVLKLVCADTALFEIYAIVGTILVV
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
. : :.: ::..: ::::.: :..:..:::::::::: ::.::. :. . :. ::: .
NP_835 MIPCLLILCSYTRIAAAILKIPSAKGKHKAFSTCSSHLLVVSLFYISSSLTYFWPKSNNS
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
:..:.: : :. .:::::.::.::: :::.:: :.. :
NP_835 PESKKLLSLSYTVVTPMLNPIIYSLRNSEVKNALSRTFHKVLALRNCIP
270 280 290 300 310
>>NP_001001957 (OMIM: 616729) olfactory receptor 2W3 [Ho (314 aa)
initn: 630 init1: 589 opt: 597 Z-score: 661.8 bits: 129.9 E(85289): 4e-30
Smith-Waterman score: 597; 46.3% identity (77.1% similar) in 188 aa overlap (1-188:118-305)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
:.::: ::::.::.:..::. ..: :. .
NP_001 CDKTISYMGCAIQLFLFLGLGGVECLLLAVMAYDRCVAICKPLHYMVIMNPRLCRGLVSV
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
.: :: ... . :::: :: .:..::. :. ...:.::..: . ..:. . ..
NP_001 TWGCGVANSLAMSPVTLRLPRCGHHEVDHFLREMPALIRMACVSTVAIEGTVFVLAVGVV
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
..:: ..:.:::.:. :.:.:.:. ::.:::.::.::: ::.::.:. : ::: : .
NP_001 LSPLVFILLSYSYIVRAVLQIRSASGRQKAFGTCGSHLTVVSLFYGNIIYMYMQPGASSS
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
..: :.:::. .:.::::::.::: :::::: : :
NP_001 QDQGMFLMLFYNIVTPLLNPLIYTLRNREVKGALGRLLLGKRELGKE
270 280 290 300 310
>>XP_011513214 (OMIM: 600578) PREDICTED: olfactory recep (300 aa)
initn: 621 init1: 580 opt: 592 Z-score: 656.6 bits: 128.9 E(85289): 7.8e-30
Smith-Waterman score: 592; 48.6% identity (76.8% similar) in 181 aa overlap (1-181:116-296)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
:..:::::.:.::.: :. ..: :: .
XP_011 PKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASV
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
.:. : . ..:.. :.:::: :... : ::. ...::.: :: :.. . .: .:::
XP_011 AWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSCEDTSYNEIQVAVASVFIL
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
: :: :.::::. : :.:::.:..::::::.:::::: :: ::..:.:..:. ::. .
XP_011 VVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
.:. : . :::. .: ::::::.::: : :
XP_011 QERGKFFGLFYAVGTPSLNPLIYTLRNKEQKRRGS
270 280 290 300
>>NP_001005191 (OMIM: 611538) olfactory receptor 7D4 [Ho (312 aa)
initn: 599 init1: 575 opt: 583 Z-score: 646.7 bits: 127.1 E(85289): 2.8e-29
Smith-Waterman score: 583; 44.2% identity (76.3% similar) in 190 aa overlap (1-190:118-307)
10 20 30
pF1KB7 MSYDRYVAICHPLRYFIIMTWKVCITLAIT
:.:::.:::::::.: .::. .: :...
NP_001 RSKDISYMGCLTQVYFLMMFAGMDTFLLAVMAYDRFVAICHPLHYTVIMNPCLCGLLVLA
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
:: ...::. :. :: : :: ::::: .::..::..: ::..:...: ..
NP_001 SWFIIFWFSLVHILLMKRLTFSTGTEIPHFFCEPAQVLKVACSNTLLNNIVLYVATALLG
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
: :. .: :::.:..... ..: .:. ::::::.::::::.::.:... .:.. :
NP_001 VFPVAGILFSYSQIVSSLMGMSSTKGKYKAFSTCGSHLCVVSLFYGTGLGVYLSSAVTHS
210 220 230 240 250 260
160 170 180 190
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
..... ..:. .:::::.::.::: .:::::.: : .
NP_001 SQSSSTASVMYAMVTPMLNPFIYSLRNKDVKGALERLLSRADSCP
270 280 290 300 310
194 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:41:06 2016 done: Fri Nov 4 04:41:06 2016
Total Scan time: 5.440 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]