Result of FASTA (omim) for
pFN21AB5463
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5463, 288 aa
1>>>pF1KB5463 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5749+/-0.000537; mu= 6.1762+/- 0.033
mean_var=179.7399+/-35.041, 0's: 0 Z-trim(113.3): 63 B-trim: 37 in 1/53
Lambda= 0.095665
statistics sampled from 22477 (22537) to 22477 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.264), width: 16
Scan time: 5.210
The best scores are: opt bits E(85289)
NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Ho ( 288) 1803 261.2 1.7e-69
NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo ( 288) 1543 225.3 1.1e-58
XP_016878382 (OMIM: 601485,616172) PREDICTED: synt ( 282) 1483 217.0 3.3e-56
NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2 ( 251) 1413 207.3 2.5e-53
XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A ( 329) 1413 207.4 3e-53
XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3 ( 287) 1227 181.7 1.5e-45
XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 1203 178.3 1.4e-44
XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 1203 178.3 1.4e-44
NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Hom ( 287) 1200 177.9 1.9e-44
NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Hom ( 288) 1188 176.3 6.1e-44
XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2 ( 319) 1177 174.8 1.9e-43
XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 1165 173.1 5.9e-43
XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 1165 173.1 5.9e-43
XP_005253614 (OMIM: 132350) PREDICTED: syntaxin-2 ( 277) 1143 170.1 4.4e-42
NP_004168 (OMIM: 600876) syntaxin-3 isoform 1 [Hom ( 289) 1141 169.8 5.5e-42
XP_005274252 (OMIM: 600876) PREDICTED: syntaxin-3 ( 289) 1141 169.8 5.5e-42
XP_016874471 (OMIM: 132350) PREDICTED: syntaxin-2 ( 309) 1120 166.9 4.3e-41
XP_016873679 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1117 166.5 5.3e-41
XP_016873680 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1117 166.5 5.3e-41
XP_016873677 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1117 166.5 5.3e-41
XP_016873678 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1117 166.5 5.3e-41
XP_016874470 (OMIM: 132350) PREDICTED: syntaxin-2 ( 317) 1116 166.4 6.4e-41
XP_016874472 (OMIM: 132350) PREDICTED: syntaxin-2 ( 260) 1109 165.3 1.1e-40
NP_001171511 (OMIM: 600876) syntaxin-3 isoform 2 [ ( 277) 1103 164.5 2e-40
XP_016873683 (OMIM: 600876) PREDICTED: syntaxin-3 ( 269) 1079 161.2 2e-39
XP_005274257 (OMIM: 600876) PREDICTED: syntaxin-3 ( 252) 934 141.2 2e-33
XP_016873684 (OMIM: 600876) PREDICTED: syntaxin-3 ( 244) 910 137.8 1.9e-32
XP_016874474 (OMIM: 132350) PREDICTED: syntaxin-2 ( 213) 838 127.9 1.7e-29
XP_016874473 (OMIM: 132350) PREDICTED: syntaxin-2 ( 214) 826 126.2 5.4e-29
XP_011543523 (OMIM: 600876) PREDICTED: syntaxin-3 ( 192) 822 125.6 7.3e-29
NP_004595 (OMIM: 186591) syntaxin-4 isoform 3 [Hom ( 297) 785 120.7 3.4e-27
XP_005255578 (OMIM: 186591) PREDICTED: syntaxin-4 ( 293) 715 111.0 2.8e-24
NP_001259025 (OMIM: 186591) syntaxin-4 isoform 2 [ ( 295) 715 111.0 2.8e-24
XP_016874477 (OMIM: 132350) PREDICTED: syntaxin-2 ( 167) 651 102.0 8.4e-22
XP_016874475 (OMIM: 132350) PREDICTED: syntaxin-2 ( 200) 633 99.5 5.3e-21
XP_016874476 (OMIM: 132350) PREDICTED: syntaxin-2 ( 199) 628 98.8 8.6e-21
NP_001259024 (OMIM: 186591) syntaxin-4 isoform 1 [ ( 219) 628 98.9 9.2e-21
XP_016873685 (OMIM: 600876) PREDICTED: syntaxin-3 ( 155) 615 97.0 2.5e-20
XP_011534519 (OMIM: 603552,605014) PREDICTED: synt ( 287) 500 81.3 2.3e-15
NP_003755 (OMIM: 603552,605014) syntaxin-11 [Homo ( 287) 500 81.3 2.3e-15
XP_011534516 (OMIM: 603552,605014) PREDICTED: synt ( 287) 500 81.3 2.3e-15
XP_011534520 (OMIM: 603552,605014) PREDICTED: synt ( 287) 500 81.3 2.3e-15
XP_016866889 (OMIM: 603552,605014) PREDICTED: synt ( 287) 500 81.3 2.3e-15
XP_011534515 (OMIM: 603552,605014) PREDICTED: synt ( 313) 500 81.4 2.5e-15
XP_011544227 (OMIM: 186591) PREDICTED: syntaxin-4 ( 154) 468 76.7 3.2e-14
XP_016874478 (OMIM: 132350) PREDICTED: syntaxin-2 ( 159) 345 59.7 4.2e-09
NP_001313508 (OMIM: 603217) syntaxin-7 isoform a [ ( 261) 299 53.5 4.9e-07
NP_001313507 (OMIM: 603217) syntaxin-7 isoform a [ ( 261) 299 53.5 4.9e-07
NP_003560 (OMIM: 603217) syntaxin-7 isoform a [Hom ( 261) 299 53.5 4.9e-07
NP_803173 (OMIM: 606892) syntaxin-12 [Homo sapiens ( 276) 291 52.5 1.1e-06
>>NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Homo s (288 aa)
initn: 1803 init1: 1803 opt: 1803 Z-score: 1368.6 bits: 261.2 E(85289): 1.7e-69
Smith-Waterman score: 1803; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
190 200 210 220 230 240
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
250 260 270 280
>>NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo sapi (288 aa)
initn: 1461 init1: 1461 opt: 1543 Z-score: 1174.7 bits: 225.3 E(85289): 1.1e-58
Smith-Waterman score: 1543; 84.2% identity (96.8% similar) in 285 aa overlap (1-285:1-284)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
:::::::::.::::::...: : ::::.:::::::::::::: :.:..:.::.::..:::
NP_443 MKDRTQELRSAKDSDDEEEV-VHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
:::.::::::::.:::.: .::::::::::::::.:::::::::::::::::::::::::
NP_443 ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
:::::::::::.::::::: ::.::: ::::::::::::::.::::::::::. :::..
NP_443 STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
: :::...::::.::::::.::::::.:::::::::.::::::::::::::::::::::.
NP_443 IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
180 190 200 210 220 230
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
:::::::::::::::::::::::::::::::::.::.:.::..::
NP_443 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
240 250 260 270 280
>>XP_016878382 (OMIM: 601485,616172) PREDICTED: syntaxin (282 aa)
initn: 1461 init1: 1461 opt: 1483 Z-score: 1130.1 bits: 217.0 E(85289): 3.3e-56
Smith-Waterman score: 1483; 84.0% identity (96.7% similar) in 275 aa overlap (11-285:5-278)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
::::::...: : ::::.:::::::::::::: :.:..:.::.::..:::
XP_016 MEPRAKDSDDEEEV-VHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
:::.::::::::.:::.: .::::::::::::::.:::::::::::::::::::::::::
XP_016 ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
:::::::::::.::::::: ::.::: ::::::::::::::.::::::::::. :::..
XP_016 STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
: :::...::::.::::::.::::::.:::::::::.::::::::::::::::::::::.
XP_016 IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
180 190 200 210 220 230
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
:::::::::::::::::::::::::::::::::.::.:.::..::
XP_016 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
240 250 260 270 280
>>NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2 [Hom (251 aa)
initn: 1413 init1: 1413 opt: 1413 Z-score: 1078.5 bits: 207.3 E(85289): 2.5e-53
Smith-Waterman score: 1413; 100.0% identity (100.0% similar) in 226 aa overlap (1-226:1-226)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQTMWRGPCLTPRRPS
190 200 210 220 230 240
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
NP_001 STRARRAGRKS
250
>>XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A iso (329 aa)
initn: 1413 init1: 1413 opt: 1413 Z-score: 1077.0 bits: 207.4 E(85289): 3e-53
Smith-Waterman score: 1413; 100.0% identity (100.0% similar) in 226 aa overlap (1-226:1-226)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQVSAGPPCPPLQPTP
190 200 210 220 230 240
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
XP_016 APRAALTSPFLPDTLPCRGGTKFSGNQSPAVETAARALPTRRSLSSAWLCLSFKDPRPCM
250 260 270 280 290 300
>>XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3 isof (287 aa)
initn: 521 init1: 521 opt: 1227 Z-score: 939.0 bits: 181.7 E(85289): 1.5e-45
Smith-Waterman score: 1227; 65.9% identity (88.3% similar) in 290 aa overlap (1-288:1-287)
10 20 30 40 50
pF1KB5 MKDRTQELRTAKDSDDDDD--VAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKH
:::: ..:.. . ..::: : ...: :::::: ..:: : ::::.:.:::.:. .
XP_005 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 SAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKT
: ::..: :. :::..::.: ..::: ::.::.::::.:. ::..: ::::::::::.
XP_005 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDE--VRSSADLRIRKS
70 80 90 100 110
120 130 140 150 160 170
pF1KB5 QHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFA
:::.:::::::::..:: .: :.::: ::::::::::::. ::.::::.::::::::::.
XP_005 QHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 SGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVE
:::: ::.:::::::::: ::..:..::.::.::::::::.:::::.::::.: :: ::
XP_005 SGII-DSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVM
180 190 200 210 220 230
240 250 260 270 280
pF1KB5 HAVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
:.::.::.: ..:::::::::.::.:::::.:::.::.:..:::.:.:::
XP_005 HTVDHVEKARDETKKAVKYQSQARKKKIMIMICCIILAIILASTIGSIFA
240 250 260 270 280
>>XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3 isof (279 aa)
initn: 848 init1: 521 opt: 1203 Z-score: 921.3 bits: 178.3 E(85289): 1.4e-44
Smith-Waterman score: 1203; 66.2% identity (88.3% similar) in 281 aa overlap (8-288:2-279)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
.. ..:: : : ...: :::::: ..:: : ::::.:.:::.:. .:
XP_016 MMKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSI
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
::..: :. :::..::.: ..::: ::.::.::::.:. ::..: ::::::::::.::
XP_016 ILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDE--VRSSADLRIRKSQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
:.:::::::::..:: .: :.::: ::::::::::::. ::.::::.::::::::::.::
XP_016 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
:: ::.:::::::::: ::..:..::.::.::::::::.:::::.::::.: :: :: :.
XP_016 II-DSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHT
180 190 200 210 220 230
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
::.::.: ..:::::::::.::.:::::.:::.::.:..:::.:.:::
XP_016 VDHVEKARDETKKAVKYQSQARKKKIMIMICCIILAIILASTIGSIFA
240 250 260 270
>>XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3 isof (279 aa)
initn: 848 init1: 521 opt: 1203 Z-score: 921.3 bits: 178.3 E(85289): 1.4e-44
Smith-Waterman score: 1203; 66.2% identity (88.3% similar) in 281 aa overlap (8-288:2-279)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
.. ..:: : : ...: :::::: ..:: : ::::.:.:::.:. .:
XP_016 MMKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSI
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
::..: :. :::..::.: ..::: ::.::.::::.:. ::..: ::::::::::.::
XP_016 ILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDE--VRSSADLRIRKSQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
:.:::::::::..:: .: :.::: ::::::::::::. ::.::::.::::::::::.::
XP_016 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
:: ::.:::::::::: ::..:..::.::.::::::::.:::::.::::.: :: :: :.
XP_016 II-DSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHT
180 190 200 210 220 230
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
::.::.: ..:::::::::.::.:::::.:::.::.:..:::.:.:::
XP_016 VDHVEKARDETKKAVKYQSQARKKKIMIMICCIILAIILASTIGSIFA
240 250 260 270
>>NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Homo sa (287 aa)
initn: 1348 init1: 1172 opt: 1200 Z-score: 918.9 bits: 177.9 E(85289): 1.9e-44
Smith-Waterman score: 1200; 65.9% identity (89.9% similar) in 287 aa overlap (1-283:1-286)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
:.:: .: :: ..:: :..:.:..:.:::.::.::::::. ::::.. :::::..::
NP_001 MRDRLPDL-TACRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSIDKITQYVEEVKKNHSI
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
::..:::. : :::::.: ..:::::::.:.:::.::::..:.:. ::.:.:::::.:::
NP_001 ILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRTSVDLRIRRTQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
:.:::::::.:.::: .:. .::: ::::::::::::::::..:::.:::::.:.::.:
NP_001 SVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLESGKPSIFTSD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
:: ::.:..:::.:::.::..:.:::.::::::.:::::::.::.:::::. :: :: .:
NP_001 IISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNA
180 190 200 210 220 230
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICC----VILGIVIASTVGGIFA
.::::.: .::::.::::::::: ..:::: :::::..:.:.
NP_001 TDYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGIILATTLS
240 250 260 270 280
>>NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Homo sa (288 aa)
initn: 1286 init1: 1170 opt: 1188 Z-score: 909.9 bits: 176.3 E(85289): 6.1e-44
Smith-Waterman score: 1188; 65.5% identity (89.1% similar) in 284 aa overlap (1-284:1-283)
10 20 30 40 50 60
pF1KB5 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
:.:: .: :: ..:: :..:.:..:.:::.::.::::::. ::::.. :::::..::
NP_919 MRDRLPDL-TACRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSIDKITQYVEEVKKNHSI
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
::..:::. : :::::.: ..:::::::.:.:::.::::..:.:. ::.:.:::::.:::
NP_919 ILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRTSVDLRIRRTQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
:.:::::::.:.::: .:. .::: ::::::::::::::::..:::.:::::.:.::.:
NP_919 SVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLESGKPSIFTSD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
:: ::.:..:::.:::.::..:.:::.::::::.:::::::.::.:::::. :: :: .:
NP_919 IISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNA
180 190 200 210 220 230
250 260 270 280
pF1KB5 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
.::::.: .::::.:::::::::: .:: :.: .:: .:
NP_919 TDYVEHAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALIIGLSVGK
240 250 260 270 280
288 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:47:18 2016 done: Fri Nov 4 03:47:18 2016
Total Scan time: 5.210 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]