Result of FASTA (ccds) for
pFN21AB4862
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4862, 485 aa
1>>>pF1KB4862 485 - 485 aa - 485 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7177+/-0.000841; mu= 16.2605+/- 0.051
mean_var=79.4634+/-15.851, 0's: 0 Z-trim(107.8): 72 B-trim: 10 in 1/51
Lambda= 0.143877
statistics sampled from 9698 (9775) to 9698 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.3), width: 16
Scan time: 2.570
The best scores are: opt bits E(32554)
CCDS44767.1 ETS1 gene_id:2113|Hs108|chr11 ( 485) 3384 712.1 3.3e-205
CCDS8475.1 ETS1 gene_id:2113|Hs108|chr11 ( 441) 2861 603.5 1.5e-172
CCDS13659.1 ETS2 gene_id:2114|Hs108|chr21 ( 469) 1513 323.7 2.6e-88
CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11 ( 354) 1499 320.8 1.5e-87
CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11 ( 225) 1373 294.5 7.9e-80
CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11 ( 259) 465 106.1 4.8e-23
CCDS13575.1 GABPA gene_id:2551|Hs108|chr21 ( 454) 468 106.8 5e-23
CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11 ( 386) 465 106.2 6.7e-23
CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11 ( 419) 465 106.2 7.2e-23
CCDS44768.1 FLI1 gene_id:2313|Hs108|chr11 ( 452) 465 106.2 7.7e-23
CCDS58789.1 ERG gene_id:2078|Hs108|chr21 ( 363) 445 102.0 1.1e-21
CCDS46649.1 ERG gene_id:2078|Hs108|chr21 ( 387) 445 102.0 1.2e-21
CCDS82674.1 ERG gene_id:2078|Hs108|chr21 ( 455) 445 102.0 1.4e-21
CCDS13657.1 ERG gene_id:2078|Hs108|chr21 ( 462) 445 102.1 1.4e-21
CCDS13658.1 ERG gene_id:2078|Hs108|chr21 ( 479) 445 102.1 1.4e-21
CCDS46648.1 ERG gene_id:2078|Hs108|chr21 ( 486) 445 102.1 1.4e-21
CCDS2428.1 FEV gene_id:54738|Hs108|chr2 ( 238) 438 100.4 2.2e-21
CCDS55084.1 ETV1 gene_id:2115|Hs108|chr7 ( 374) 430 98.9 1e-20
CCDS55083.1 ETV1 gene_id:2115|Hs108|chr7 ( 419) 430 98.9 1.1e-20
CCDS55085.1 ETV1 gene_id:2115|Hs108|chr7 ( 437) 430 98.9 1.1e-20
CCDS55087.1 ETV1 gene_id:2115|Hs108|chr7 ( 454) 430 98.9 1.2e-20
CCDS55086.1 ETV1 gene_id:2115|Hs108|chr7 ( 459) 430 98.9 1.2e-20
CCDS55088.1 ETV1 gene_id:2115|Hs108|chr7 ( 477) 430 98.9 1.2e-20
CCDS33906.1 ETV5 gene_id:2119|Hs108|chr3 ( 510) 421 97.1 4.7e-20
CCDS59292.1 ETV4 gene_id:2118|Hs108|chr17 ( 207) 409 94.4 1.3e-19
CCDS58553.1 ETV4 gene_id:2118|Hs108|chr17 ( 445) 409 94.6 2.4e-19
CCDS11465.1 ETV4 gene_id:2118|Hs108|chr17 ( 484) 409 94.6 2.6e-19
CCDS77281.1 ETV2 gene_id:2116|Hs108|chr19 ( 155) 396 91.6 6.5e-19
CCDS74341.1 ETV2 gene_id:2116|Hs108|chr19 ( 249) 394 91.3 1.3e-18
CCDS32995.2 ETV2 gene_id:2116|Hs108|chr19 ( 342) 394 91.4 1.7e-18
CCDS12600.1 ERF gene_id:2077|Hs108|chr19 ( 548) 377 88.0 2.8e-17
CCDS59165.1 ELK1 gene_id:2002|Hs108|chrX ( 95) 353 82.6 2.1e-16
CCDS1164.1 ETV3 gene_id:2117|Hs108|chr1 ( 143) 355 83.1 2.2e-16
CCDS30893.1 ETV3L gene_id:440695|Hs108|chr1 ( 361) 356 83.5 4.1e-16
CCDS44250.1 ETV3 gene_id:2117|Hs108|chr1 ( 512) 355 83.4 6.3e-16
CCDS14283.1 ELK1 gene_id:2002|Hs108|chrX ( 428) 353 82.9 7.3e-16
CCDS9060.1 ELK3 gene_id:2004|Hs108|chr12 ( 407) 340 80.2 4.5e-15
CCDS1457.1 ELK4 gene_id:2005|Hs108|chr1 ( 405) 328 77.7 2.5e-14
CCDS1456.1 ELK4 gene_id:2005|Hs108|chr1 ( 431) 328 77.8 2.7e-14
CCDS45043.1 ELF1 gene_id:1997|Hs108|chr13 ( 595) 304 72.9 1.1e-12
CCDS9374.1 ELF1 gene_id:1997|Hs108|chr13 ( 619) 300 72.0 2e-12
CCDS64062.1 ELF2 gene_id:1998|Hs108|chr4 ( 521) 294 70.7 4.2e-12
CCDS3745.1 ELF2 gene_id:1998|Hs108|chr4 ( 533) 294 70.7 4.2e-12
CCDS3744.1 ELF2 gene_id:1998|Hs108|chr4 ( 581) 294 70.8 4.6e-12
CCDS82954.1 ELF2 gene_id:1998|Hs108|chr4 ( 593) 294 70.8 4.6e-12
CCDS14617.1 ELF4 gene_id:2000|Hs108|chrX ( 663) 294 70.8 5.1e-12
CCDS64063.1 ELF2 gene_id:1998|Hs108|chr4 ( 504) 283 68.4 2e-11
>>CCDS44767.1 ETS1 gene_id:2113|Hs108|chr11 (485 aa)
initn: 3384 init1: 3384 opt: 3384 Z-score: 3797.7 bits: 712.1 E(32554): 3.3e-205
Smith-Waterman score: 3384; 100.0% identity (100.0% similar) in 485 aa overlap (1-485:1-485)
10 20 30 40 50 60
pF1KB4 MSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWDEMATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWDEMATQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 EVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQWTETH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQWTETH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 VRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKED
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 VKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 LSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 SYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 DKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 KRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVK
430 440 450 460 470 480
pF1KB4 PDADE
:::::
CCDS44 PDADE
>>CCDS8475.1 ETS1 gene_id:2113|Hs108|chr11 (441 aa)
initn: 2861 init1: 2861 opt: 2861 Z-score: 3211.6 bits: 603.5 E(32554): 1.5e-172
Smith-Waterman score: 2861; 100.0% identity (100.0% similar) in 414 aa overlap (72-485:28-441)
50 60 70 80 90 100
pF1KB4 SNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFT
::::::::::::::::::::::::::::::
CCDS84 MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFT
10 20 30 40 50
110 120 130 140 150 160
pF1KB4 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA
60 70 80 90 100 110
170 180 190 200 210 220
pF1KB4 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE
120 130 140 150 160 170
230 240 250 260 270 280
pF1KB4 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC
180 190 200 210 220 230
290 300 310 320 330 340
pF1KB4 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN
240 250 260 270 280 290
350 360 370 380 390 400
pF1KB4 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT
300 310 320 330 340 350
410 420 430 440 450 460
pF1KB4 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD
360 370 380 390 400 410
470 480
pF1KB4 LQSLLGYTPEELHAMLDVKPDADE
::::::::::::::::::::::::
CCDS84 LQSLLGYTPEELHAMLDVKPDADE
420 430 440
>>CCDS13659.1 ETS2 gene_id:2114|Hs108|chr21 (469 aa)
initn: 1464 init1: 877 opt: 1513 Z-score: 1699.0 bits: 323.7 E(32554): 2.6e-88
Smith-Waterman score: 1519; 54.7% identity (76.5% similar) in 439 aa overlap (55-485:45-469)
30 40 50 60 70 80
pF1KB4 QGPSNTYEDPRMNCGFQSNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPS
.:.. :::::::. : ..:::::
CCDS13 VANSYRGTLKRQPAFDTFDGSLFAVFPSLNEEQTLQEVPTGLDSISHDSANCELPLLTPC
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB4 SKEMMSQALKATFSGFTKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCM
:: .:::::::::::: :::.::::::.: :.: .: .:..::.::::: .:..:.: :
CCDS13 SKAVMSQALKATFSGFKKEQRRLGIPKNPWLWSEQQVCQWLLWATNEFSLVNVNLQRFGM
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB4 NGAALCALGKDCFLELAPDFVGDILWEHLEILQKEDVKP----YQVNGVNPAYPESRYTS
:: :: :::. :::::::::::::::::: . ::. . :. :. . :. . .
CCDS13 NGQMLCNLGKERFLELAPDFVGDILWEHLEQMIKENQEKTEDQYEENSHLTSVPH--WIN
140 150 160 170 180 190
210 220 230 240 250
pF1KB4 DYFISYGIEHAQCVPPSEFSEPSFITESY-QTLHPISSEELLSLKYEND-YPSVILRDPL
. ...: :.: : .. .. . ... : :. .:: . : . .:. :
CCDS13 SNTLGFGTEQA----PYGMQTQNYPKGGLLDSMCPASTPSVLSSEQEFQMFPKSRL----
200 210 220 230 240
260 270 280 290 300 310
pF1KB4 QTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFES-IESYDSCDRLTQSWSSQSS
.... : ...:. .:. . .. : .:: :. .:..: : : :::.::::
CCDS13 --SSVSVTYCSVSQDF-PGSNLNLLTNNSGTPKDHDSPENGADSFESSDSLLQSWNSQSS
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB4 FNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRAD-LNKDKPVIPAAALAGYTGS
. ..:::::..::. .: .: .:: .::::...:.: ... :::::::.:::.:::
CCDS13 LLDVQRVPSFESFE-DDCSQSLCLNKPTMSFKDYIQERSDPVEQGKPVIPAAVLAGFTGS
310 320 330 340 350 360
380 390 400 410 420 430
pF1KB4 GPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRG
:::::::::::::.:::::::::::::::::::.::::::::::::::::::::::::::
CCDS13 GPIQLWQFLLELLSDKSCQSFISWTGDGWEFKLADPDEVARRWGKRKNKPKMNYEKLSRG
370 380 390 400 410 420
440 450 460 470 480
pF1KB4 LRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
:::::::::::::.:::::::::::::.:::.:::::::.: :.::...
CCDS13 LRYYYDKNIIHKTSGKRYVYRFVCDLQNLLGFTPEELHAILGVQPDTED
430 440 450 460
>>CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11 (354 aa)
initn: 1498 init1: 1498 opt: 1499 Z-score: 1685.1 bits: 320.8 E(32554): 1.5e-87
Smith-Waterman score: 2086; 79.0% identity (79.0% similar) in 414 aa overlap (72-485:28-354)
50 60 70 80 90 100
pF1KB4 SNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFT
::::::::::::::::::::::::::::::
CCDS81 MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFT
10 20 30 40 50
110 120 130 140 150 160
pF1KB4 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA
60 70 80 90 100 110
170 180 190 200 210 220
pF1KB4 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE
120 130 140 150 160 170
230 240 250 260 270 280
pF1KB4 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC
180 190 200 210 220 230
290 300 310 320 330 340
pF1KB4 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN
:::::::
CCDS81 MGRTSRG-----------------------------------------------------
240
350 360 370 380 390 400
pF1KB4 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT
::::::::::::::::::::::::::
CCDS81 ----------------------------------SGPIQLWQFLLELLTDKSCQSFISWT
250 260 270
410 420 430 440 450 460
pF1KB4 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD
280 290 300 310 320 330
470 480
pF1KB4 LQSLLGYTPEELHAMLDVKPDADE
::::::::::::::::::::::::
CCDS81 LQSLLGYTPEELHAMLDVKPDADE
340 350
>>CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11 (225 aa)
initn: 1373 init1: 1373 opt: 1373 Z-score: 1546.6 bits: 294.5 E(32554): 7.9e-80
Smith-Waterman score: 1373; 99.5% identity (99.5% similar) in 200 aa overlap (286-485:26-225)
260 270 280 290 300 310
pF1KB4 DPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQ
: ::::::::::::::::::::::::::::
CCDS53 MKAAVDLKPTLTIIKTEKVDLELFPSPGKLGGQDSFESIESYDSCDRLTQSWSSQ
10 20 30 40 50
320 330 340 350 360 370
pF1KB4 SSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTG
60 70 80 90 100 110
380 390 400 410 420 430
pF1KB4 SGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSR
120 130 140 150 160 170
440 450 460 470 480
pF1KB4 GLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
180 190 200 210 220
>>CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11 (259 aa)
initn: 469 init1: 425 opt: 465 Z-score: 527.1 bits: 106.1 E(32554): 4.8e-23
Smith-Waterman score: 465; 47.8% identity (72.0% similar) in 157 aa overlap (309-458:11-167)
280 290 300 310 320 330
pF1KB4 NMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFD----SED
: : ..::: :... ::::: ...
CCDS59 MDPGSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNN
10 20 30 40
340 350 360 370 380 390
pF1KB4 YPAALPNHKPKGTFKDYVRDRADLNKDKP---VIPAAALAGYTGSGPIQLWQFLLELLTD
. ..: . : : . .. . . : . :... . ::: :::::::::::.:
CCDS59 MNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSD
50 60 70 80 90 100
400 410 420 430 440 450
pF1KB4 KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG
.. : :.: : . :::..::::::::::.::.::.:::.::::.:::::::::. :. :
CCDS59 SANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG
110 120 130 140 150 160
460 470 480
pF1KB4 KRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
:::.:.:
CCDS59 KRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSS
170 180 190 200 210 220
>>CCDS13575.1 GABPA gene_id:2551|Hs108|chr21 (454 aa)
initn: 715 init1: 459 opt: 468 Z-score: 526.9 bits: 106.8 E(32554): 5e-23
Smith-Waterman score: 522; 31.5% identity (51.5% similar) in 400 aa overlap (81-477:152-418)
60 70 80 90 100
pF1KB4 YPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALK--ATFSGFTKEQQRLG
.: : : :. . :.. :. :::.:::
CCDS13 VVIDPDAHHAESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLG
130 140 150 160 170 180
110 120 130 140 150 160
pF1KB4 IPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDI
:: :: ::. .: ::.:...:::. .:. . ..: ::.:... :.. .: :.:
CCDS13 IPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEI
190 200 210 220 230
170 180 190 200 210 220
pF1KB4 LWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITES
:: :::.:.: : ..
CCDS13 LWSHLELLRK-----------------------YVLA-----------------------
240 250
230 240 250 260 270 280
pF1KB4 YQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRG
:.:. .. : : :. .:. .::
CCDS13 -------SQEQQMNEIVTIDQPVQIIPASVQS--------------ATPT----------
260 270 280
290 300 310 320 330 340
pF1KB4 KLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTF
.:. .: :.... ..::.: ...:: . :...
CCDS13 ---------TIKVINS--------SAKAA--KVQRAPR---ISGEDRSS--PGNR-----
290 300 310
350 360 370 380 390 400
pF1KB4 KDYVRDRADLNKDKPVIPAAALAGYTGS-GPIQLWQFLLELLTDKSCQSFISWTGDGWEF
::. : ::::::::::::::. .. :::.:: ::
CCDS13 -------------------------TGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEF
320 330 340
410 420 430 440 450 460
pF1KB4 KLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLG
::..:. ::..::.::::: ::::::::.:::::: ..: :. :::.::.:::::..:.:
CCDS13 KLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIG
350 360 370 380 390 400
470 480
pF1KB4 YTPEELHAMLDVKPDADE
:. ::. ..
CCDS13 YSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
410 420 430 440 450
>>CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11 (386 aa)
initn: 642 init1: 425 opt: 465 Z-score: 524.6 bits: 106.2 E(32554): 6.7e-23
Smith-Waterman score: 465; 47.8% identity (72.0% similar) in 157 aa overlap (309-458:138-294)
280 290 300 310 320 330
pF1KB4 NMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFD----SED
: : ..::: :... ::::: ...
CCDS59 DFLRATTLYNTEVLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNN
110 120 130 140 150 160
340 350 360 370 380 390
pF1KB4 YPAALPNHKPKGTFKDYVRDRADLNKDKP---VIPAAALAGYTGSGPIQLWQFLLELLTD
. ..: . : : . .. . . : . :... . ::: :::::::::::.:
CCDS59 MNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSD
170 180 190 200 210 220
400 410 420 430 440 450
pF1KB4 KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG
.. : :.: : . :::..::::::::::.::.::.:::.::::.:::::::::. :. :
CCDS59 SANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG
230 240 250 260 270 280
460 470 480
pF1KB4 KRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
:::.:.:
CCDS59 KRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSS
290 300 310 320 330 340
>>CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11 (419 aa)
initn: 642 init1: 425 opt: 465 Z-score: 524.0 bits: 106.2 E(32554): 7.2e-23
Smith-Waterman score: 465; 47.8% identity (72.0% similar) in 157 aa overlap (309-458:171-327)
280 290 300 310 320 330
pF1KB4 NMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFD----SED
: : ..::: :... ::::: ...
CCDS53 DFLRATTLYNTEVLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNN
150 160 170 180 190 200
340 350 360 370 380 390
pF1KB4 YPAALPNHKPKGTFKDYVRDRADLNKDKP---VIPAAALAGYTGSGPIQLWQFLLELLTD
. ..: . : : . .. . . : . :... . ::: :::::::::::.:
CCDS53 MNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSD
210 220 230 240 250 260
400 410 420 430 440 450
pF1KB4 KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG
.. : :.: : . :::..::::::::::.::.::.:::.::::.:::::::::. :. :
CCDS53 SANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG
270 280 290 300 310 320
460 470 480
pF1KB4 KRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
:::.:.:
CCDS53 KRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSS
330 340 350 360 370 380
>>CCDS44768.1 FLI1 gene_id:2313|Hs108|chr11 (452 aa)
initn: 642 init1: 425 opt: 465 Z-score: 523.6 bits: 106.2 E(32554): 7.7e-23
Smith-Waterman score: 465; 47.8% identity (72.0% similar) in 157 aa overlap (309-458:204-360)
280 290 300 310 320 330
pF1KB4 NMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFD----SED
: : ..::: :... ::::: ...
CCDS44 DFLRATTLYNTEVLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNN
180 190 200 210 220 230
340 350 360 370 380 390
pF1KB4 YPAALPNHKPKGTFKDYVRDRADLNKDKP---VIPAAALAGYTGSGPIQLWQFLLELLTD
. ..: . : : . .. . . : . :... . ::: :::::::::::.:
CCDS44 MNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSD
240 250 260 270 280 290
400 410 420 430 440 450
pF1KB4 KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG
.. : :.: : . :::..::::::::::.::.::.:::.::::.:::::::::. :. :
CCDS44 SANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG
300 310 320 330 340 350
460 470 480
pF1KB4 KRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
:::.:.:
CCDS44 KRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSS
360 370 380 390 400 410
485 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:16:03 2016 done: Fri Nov 4 03:16:04 2016
Total Scan time: 2.570 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]