Result of FASTA (ccds) for
pFN21AA0872
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0872, 547 aa
1>>>pF1KA0872 547 - 547 aa - 547 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4664+/-0.000821; mu= 5.7391+/- 0.050
mean_var=177.8392+/-35.290, 0's: 0 Z-trim(114.5): 12 B-trim: 0 in 0/53
Lambda= 0.096175
statistics sampled from 15041 (15049) to 15041 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.462), width: 16
Scan time: 4.190
The best scores are: opt bits E(32554)
CCDS10925.1 MON1B gene_id:22879|Hs108|chr16 ( 547) 3632 515.9 4.9e-146
CCDS67082.1 MON1B gene_id:22879|Hs108|chr16 ( 401) 2564 367.6 1.6e-101
CCDS67083.1 MON1B gene_id:22879|Hs108|chr16 ( 438) 2562 367.4 2e-101
CCDS2808.2 MON1A gene_id:84315|Hs108|chr3 ( 652) 946 143.2 8.8e-34
CCDS46830.1 MON1A gene_id:84315|Hs108|chr3 ( 490) 473 77.5 4e-14
>>CCDS10925.1 MON1B gene_id:22879|Hs108|chr16 (547 aa)
initn: 3632 init1: 3632 opt: 3632 Z-score: 2735.2 bits: 515.9 E(32554): 4.9e-146
Smith-Waterman score: 3632; 100.0% identity (100.0% similar) in 547 aa overlap (1-547:1-547)
10 20 30 40 50 60
pF1KA0 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
490 500 510 520 530 540
pF1KA0 NGLFTGL
:::::::
CCDS10 NGLFTGL
>>CCDS67082.1 MON1B gene_id:22879|Hs108|chr16 (401 aa)
initn: 2564 init1: 2564 opt: 2564 Z-score: 1936.3 bits: 367.6 E(32554): 1.6e-101
Smith-Waterman score: 2564; 99.2% identity (99.7% similar) in 392 aa overlap (156-547:10-401)
130 140 150 160 170 180
pF1KA0 YGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQ
. .:::::::::::::::::::::::::::
CCDS67 MVSGQLRFGVKTEDHKLVFLQQGPLLLVAMSRTSQSAAQ
10 20 30
190 200 210 220 230 240
pF1KA0 LRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 LRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLL
40 50 60 70 80 90
250 260 270 280 290 300
pF1KA0 GAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 GAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQ
100 110 120 130 140 150
310 320 330 340 350 360
pF1KA0 LLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAFHAMAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 LLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAFHAMAA
160 170 180 190 200 210
370 380 390 400 410 420
pF1KA0 CRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 CRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHR
220 230 240 250 260 270
430 440 450 460 470 480
pF1KA0 QLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 QLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSK
280 290 300 310 320 330
490 500 510 520 530 540
pF1KA0 FELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 FELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFT
340 350 360 370 380 390
pF1KA0 GL
::
CCDS67 GL
400
>>CCDS67083.1 MON1B gene_id:22879|Hs108|chr16 (438 aa)
initn: 2886 init1: 2562 opt: 2562 Z-score: 1934.3 bits: 367.4 E(32554): 2e-101
Smith-Waterman score: 2672; 80.1% identity (80.1% similar) in 547 aa overlap (1-547:1-438)
10 20 30 40 50 60
pF1KA0 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEET-----------
10 20 30 40
70 80 90 100 110 120
pF1KA0 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
CCDS67 ------------------------------------------------------------
130 140 150 160 170 180
pF1KA0 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
::::::::::::::::::::::
CCDS67 --------------------------------------EDHKLVFLQQGPLLLVAMSRTS
50 60 70
190 200 210 220 230 240
pF1KA0 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
80 90 100 110 120 130
250 260 270 280 290 300
pF1KA0 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
140 150 160 170 180 190
310 320 330 340 350 360
pF1KA0 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
200 210 220 230 240 250
370 380 390 400 410 420
pF1KA0 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
260 270 280 290 300 310
430 440 450 460 470 480
pF1KA0 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
320 330 340 350 360 370
490 500 510 520 530 540
pF1KA0 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
380 390 400 410 420 430
pF1KA0 NGLFTGL
:::::::
CCDS67 NGLFTGL
>>CCDS2808.2 MON1A gene_id:84315|Hs108|chr3 (652 aa)
initn: 1262 init1: 548 opt: 946 Z-score: 719.9 bits: 143.2 E(32554): 8.8e-34
Smith-Waterman score: 1390; 46.3% identity (70.6% similar) in 521 aa overlap (16-527:155-652)
10 20 30 40
pF1KA0 MEVGGDTAAPAPGGAEDL---EDTQFPSEEAREGGGVHAVPPDPE
::: :: .. .:: ... :: :
CCDS28 RAESPTPGMAQGMEPGAGQEGAMFVHARSYEDLTESEDGAASGDSHKEG--TRGPPPLPT
130 140 150 160 170 180
50 60 70 80 90 100
pF1KA0 D-EGLEETGSKDKDQPPSPSPPPQSEALSSTSRLW-SPAAPENSPTCSPESSSGGQGGDP
: . . . :. . : . . : : : ..:. : : . . :. : : ::
CCDS28 DMRQISQDFSELSTQLTGVARDLQEEMLPGSSEDWLEPPGAVGRPATEPPRE-GTTEGDE
190 200 210 220 230 240
110 120 130 140 150
pF1KA0 SD--EEWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYA
: : :: ..::::::::::::.:::::: ::::.:::::.:::::... .:::.:.:
CCDS28 EDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHA
250 260 270 280 290 300
160 170 180 190 200 210
pF1KA0 EDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDL
. .:.::....::.:::..:: ::: .: ::: .. ::.: :: :....:: .::::::
CCDS28 DGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDL
310 320 330 340 350 360
220 230 240 250 260 270
pF1KA0 RRLLAGSERTLDRLLDSMEQDPGALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVL
::::.:::: : ::. : .:: ..:.::.::.::: .::...: :.. : .:..:.:
CCDS28 RRLLSGSERITDNLLQLMARDP-SFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSIL
370 380 390 400 410 420
280 290 300 310 320 330
pF1KA0 AVGGRLITAAQERNVLAECRLDPADLQLLLDWVGAPA-FAAGEAWAPVCLPRFNPDGFFY
. ..:.. ..... . : : ::.::.. ... . : ::::.:::::.:: :::.
CCDS28 LARNQLVALVRRKDQF----LHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH
430 440 450 460 470
340 350 360 370 380 390
pF1KA0 AYVARLDA-MPVCLLLLGTQREAFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSAS
:... :. .::::..:.:: : :.. ::: .. .. :: :: ::
CCDS28 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALR--------
480 490 500 510 520
400 410 420 430 440 450
pF1KA0 APAYSVQAVGAPGLRHFLYKPLDIPDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLH
.: ::: :: : ::::::: .. :::::.::::. :::..:: ::. ::
CCDS28 TPYYSVAQVGIPDLRHFLYK-------SKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLH
530 540 550 560 570 580
460 470 480 490 500 510
pF1KA0 ARLHSTSRPLRLIYHVAEKETLLAWVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEE
.: :..::::. ::... .:.::::::. :::: : ::: :::.:. .. ::.::..:::
CCDS28 SRAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEE
590 600 610 620 630 640
520 530 540
pF1KA0 DRLFIRYPPKYSTPPATSTDQAAHNGLFTGL
::::: : :
CCDS28 DRLFILTPLTY
650
>>CCDS46830.1 MON1A gene_id:84315|Hs108|chr3 (490 aa)
initn: 964 init1: 400 opt: 473 Z-score: 367.1 bits: 77.5 E(32554): 4e-14
Smith-Waterman score: 1073; 47.4% identity (73.6% similar) in 371 aa overlap (159-527:140-490)
130 140 150 160 170 180
pF1KA0 VEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQLRG
. .:.::....::.:::..:: ::: .:
CCDS46 CLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKVVFVRRSPLVLVAVARTRQSAQELAQ
110 120 130 140 150 160
190 200 210 220 230 240
pF1KA0 ELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLLGAV
::: .. ::.: :: :....:: .::::::::::.:::: : ::. : .:: ..:.::.
CCDS46 ELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSGSERITDNLLQLMARDP-SFLMGAA
170 180 190 200 210 220
250 260 270 280 290 300
pF1KA0 RCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQLLL
::.::: .::...: :.. : .:..:.: . ..:.. ..... . : : ::.::.
CCDS46 RCLPLAAAVRDTVSASLQQARARSLVFSILLARNQLVALVRRKDQF----LHPIDLHLLF
230 240 250 260 270 280
310 320 330 340 350 360
pF1KA0 DWVGAPA-FAAGEAWAPVCLPRFNPDGFFYAYVARLDA-MPVCLLLLGTQREAFHAMAAC
. ... . : ::::.:::::.:: :::.:... :. .::::..:.:: : :.. :
CCDS46 NLISSSSSFREGEAWTPVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVSDC
290 300 310 320 330 340
370 380 390 400 410 420
pF1KA0 RRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHRQ
:: .. .. :: :: :: .: ::: :: : ::::::: ..
CCDS46 RRRFQERLRKRGAHLALREALR--------TPYYSVAQVGIPDLRHFLYKS-------KS
350 360 370 380
430 440 450 460 470 480
pF1KA0 LPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSKF
:::::.::::. :::..:: ::. ::.: :..::::. ::... .:.::::::. :
CCDS46 SGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYYTGPNENLLAWVTGAF
390 400 410 420 430 440
490 500 510 520 530 540
pF1KA0 ELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFTG
::: : ::: :::.:. .. ::.::..:::::::: : :
CCDS46 ELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY
450 460 470 480 490
pF1KA0 L
547 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:05:42 2016 done: Fri Nov 4 01:05:42 2016
Total Scan time: 4.190 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]