(Circular) (Six-base) MAPSORT of: pFN21AA0249.seq Check: 421 from: 1 to: 7393 pFN21AA0249 7393 bp With 182 enzymes: SgfI * January 16, 2009 15:22 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 2023 2023 Size: 7393 AatII G_ACGT'C Cuts at: 278 331 414 600 1536 5203 278 Size: 53 83 186 936 3667 2468 Fragments arranged by size: 3667 2468 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 3150 4736 1937 Size: 1213 1586 4594 Fragments arranged by size: 4594 1586 1213 Acc65I G'GTAC_C Cuts at: 4714 4714 Size: 7393 AclI AA'CG_TT Cuts at: 1563 5520 5893 1563 Size: 3957 373 3063 Fragments arranged by size: 3957 3063 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 2301 2355 3264 3971 4689 5456 6840 7108 Size: 669 54 909 707 718 767 1384 268 Cuts at: 7108 1632 Size: 1917 Fragments arranged by size: 1917 1384 909 767 718 707 669 268 54 AflII C'TTAA_G Cuts at: 820 1017 820 Size: 197 7196 AflIII A'CryG_T Cuts at: 1203 2419 2543 6292 7269 1203 Size: 1216 124 3749 977 1327 Fragments arranged by size: 3749 1327 1216 977 124 AgeI A'CCGG_T Cuts at: 6224 6224 Size: 7393 AhdI GACnn_n'nnGTC Cuts at: 2721 3157 6122 2721 Size: 436 2965 3992 Fragments arranged by size: 3992 2965 436 AleI CACnn'nnGTG Cuts at: 1166 1166 Size: 7393 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 4292 1184 Size: 3108 4285 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 4568 4600 4568 Size: 32 7361 AlwNI CAG_nnn'CTG Cuts at: 3389 5136 6708 3389 Size: 1747 1572 4074 Fragments arranged by size: 4074 1747 1572 ApaI G_GGCC'C Cuts at: 2584 4289 2584 Size: 1705 5688 ApaLI G'TGCA_C Cuts at: 5450 6606 5450 Size: 1156 6237 ApoI r'AATT_y Cuts at: 1493 3450 3464 3494 4609 4702 4928 5080 7189 Size: 1957 14 30 1115 93 226 152 2109 Cuts at: 7189 1493 Size: 1697 Fragments arranged by size: 2109 1957 1697 1115 226 152 93 30 14 AseI AT'TA_AT Cuts at: 160 1032 4517 5947 160 Size: 872 3485 1430 1606 Fragments arranged by size: 3485 1606 1430 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 7393 AvaI C'yCGr_G Cuts at: 1870 1943 3302 3817 4281 4718 1870 Size: 73 1359 515 464 437 4545 Fragments arranged by size: 4545 1359 515 464 437 73 AvrII C'CTAG_G Cuts at: 2858 2858 Size: 7393 BamHI G'GATC_C Cuts at: 4723 5090 4723 Size: 367 7026 BanI G'GyrC_C Cuts at: 618 943 1160 1787 3118 3368 3745 3791 4007 Size: 325 217 627 1331 250 377 46 216 Cuts at: 4007 4714 6169 618 Size: 707 1455 1842 Fragments arranged by size: 1842 1455 1331 707 627 377 325 250 217 216 46 BanII G_rGCy'C Cuts at: 1391 2564 2584 2998 3285 3843 3882 4289 4572 Size: 1173 20 414 287 558 39 407 283 Cuts at: 4572 4712 1391 Size: 140 4072 Fragments arranged by size: 4072 1173 558 414 407 287 283 140 39 20 BbeI G_GCGC'C Cuts at: 3122 3122 Size: 7393 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 2544 2964 928 Size: 971 645 420 5357 Fragments arranged by size: 5357 971 645 420 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 5584 5618 1903 Size: 34 3647 34 3678 Fragments arranged by size: 3678 3647 34 34 BciVI GTATCCnnnnn_n' Cuts at: 5285 6495 5285 Size: 1210 6183 BclI T'GATC_A Cuts at: 1548 1548 Size: 7393 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 3800 6004 136 Size: 107 122 71 631 605 2128 2204 1525 Fragments arranged by size: 2204 2128 1525 631 605 122 107 71 BglII A'GATC_T Cuts at: 7388 7388 Size: 7393 BlpI GC'TnA_GC Cuts at: 4810 4810 Size: 7393 Bme1580I G_kGCm'C Cuts at: 1790 2584 4271 4289 5454 6610 1790 Size: 794 1687 18 1165 1156 2573 Fragments arranged by size: 2573 1687 1165 1156 794 18 BmgBI CAC'GTC Cuts at: 1318 2422 2799 1318 Size: 1104 377 5912 Fragments arranged by size: 5912 1104 377 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 2904 3322 3574 Size: 416 53 83 399 24 1487 418 252 Cuts at: 3574 3991 4261 5124 6082 442 Size: 417 270 863 958 1753 Fragments arranged by size: 1753 1487 958 863 418 417 416 399 270 252 83 53 24 BmtI G_CTAG'C Cuts at: 1056 1056 Size: 7393 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 3139 3397 3829 4654 3139 Size: 258 432 825 5878 Fragments arranged by size: 5878 825 432 258 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 2765 6053 1239 Size: 1526 3288 2579 Fragments arranged by size: 3288 2579 1526 Bpu10I CC'TnA_GC Cuts at: 3109 3590 3884 3109 Size: 481 294 6618 Fragments arranged by size: 6618 481 294 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 3074 5518 6383 6681 3074 Size: 2444 865 298 3786 Fragments arranged by size: 3786 2444 865 298 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 2693 4650 6056 882 Size: 617 1194 1957 1406 2219 Fragments arranged by size: 2219 1957 1406 1194 617 BsaAI yAC'GTr Cuts at: 493 1204 5184 493 Size: 711 3980 2702 Fragments arranged by size: 3980 2702 711 BsaBI GATnn'nnATC Cuts at: 7387 7387 Size: 7393 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 3119 5200 5582 6217 Size: 53 83 186 936 1586 2081 382 635 Cuts at: 6217 275 Size: 1451 Fragments arranged by size: 2081 1586 1451 936 635 382 186 83 53 BsaWI w'CCGG_w Cuts at: 5826 6224 6498 6645 7056 5826 Size: 398 274 147 411 6163 Fragments arranged by size: 6163 411 398 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 2783 2813 3939 3969 4098 Size: 30 165 30 1380 30 1126 30 129 Cuts at: 4098 4128 4568 4598 1178 Size: 30 440 30 3973 Fragments arranged by size: 3973 1380 1126 440 165 129 30 30 30 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 2288 3039 3805 3919 1186 Size: 1102 751 766 114 4660 Fragments arranged by size: 4660 1102 766 751 114 BseYI C'CCAG_C Cuts at: 2027 2167 4123 4304 6596 7092 2027 Size: 140 1956 181 2292 496 2328 Fragments arranged by size: 2328 2292 1956 496 181 140 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 2241 4041 4232 1163 Size: 573 505 1800 191 4324 Fragments arranged by size: 4324 1800 573 505 191 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 3789 3804 4843 5604 6632 1540 Size: 275 186 1788 15 1039 761 1028 2301 Fragments arranged by size: 2301 1788 1039 1028 761 275 186 15 BsiHKAI G_wGCw'C Cuts at: 2564 3843 4572 5454 5539 6610 2564 Size: 1279 729 882 85 1071 3347 Fragments arranged by size: 3347 1279 1071 882 729 85 BsmI GAATG_Cn' Cuts at: 4904 4997 4904 Size: 93 7300 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2564 2584 2998 3285 3843 3882 4271 Size: 399 774 20 414 287 558 39 389 Cuts at: 4271 4289 4572 4712 5454 5539 6610 1391 Size: 18 283 140 742 85 1071 2174 Fragments arranged by size: 2174 1071 774 742 558 414 399 389 287 283 140 85 39 20 18 BspEI T'CCGG_A Cuts at: 7056 7056 Size: 7393 BspHI T'CATG_A Cuts at: 5282 7012 5282 Size: 1730 5663 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 2023 2764 3771 4254 4748 844 Size: 1179 741 1007 483 494 3489 Fragments arranged by size: 3489 1179 1007 741 494 483 BsrBI CCG'CTC Cuts at: 1394 1823 5280 1394 Size: 429 3457 3507 Fragments arranged by size: 3507 3457 429 BsrDI GCAATG_nn' Cuts at: 65 1248 5888 6062 65 Size: 1183 4640 174 1396 Fragments arranged by size: 4640 1396 1183 174 BsrFI r'CCGG_y Cuts at: 1700 1810 3136 3784 3788 3799 6037 6224 1700 Size: 110 1326 648 4 11 2238 187 2869 Fragments arranged by size: 2869 2238 1326 648 187 110 11 4 BsrGI T'GTAC_A Cuts at: 96 96 Size: 7393 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 7393 BssSI C'ACGA_G Cuts at: 2592 4209 4571 5453 6465 2592 Size: 1617 362 882 1012 3520 Fragments arranged by size: 3520 1617 1012 882 362 BstAPI GCAn_nnn'nTGC Cuts at: 794 2528 3375 794 Size: 1734 847 4812 Fragments arranged by size: 4812 1734 847 BstBI TT'CG_AA Cuts at: 6197 6197 Size: 7393 BstEII G'GTnAC_C Cuts at: 1184 1184 Size: 7393 BstXI CCAn_nnnn'nTGG Cuts at: 2998 3859 4222 2998 Size: 861 363 6169 Fragments arranged by size: 6169 861 363 BstYI r'GATC_y Cuts at: 1972 2180 2227 2597 4723 5090 5475 5492 6944 Size: 208 47 370 2126 367 385 17 1452 Cuts at: 6944 7030 7042 7388 1972 Size: 86 12 346 1977 Fragments arranged by size: 2126 1977 1452 385 370 367 346 208 86 47 17 12 Bsu36I CC'TnA_GG Cuts at: 3621 3621 Size: 7393 BtgI C'CryG_G Cuts at: 513 1065 2952 3342 3393 3889 4237 513 Size: 552 1887 390 51 496 348 3669 Fragments arranged by size: 3669 1887 552 496 390 348 51 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 487 Size: 683 56 6654 Fragments arranged by size: 6654 683 56 BtsI GCAGTG_nn' Cuts at: 2224 2229 3302 4909 5703 5723 2224 Size: 5 1073 1607 794 20 3894 Fragments arranged by size: 3894 1607 1073 794 20 5 ClaI AT'CG_AT Cuts at: 1554 1554 Size: 7393 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 3009 3044 529 Size: 35 2445 35 4878 Fragments arranged by size: 4878 2445 35 35 DraI TTT'AAA Cuts at: 2350 4697 2350 Size: 2347 5046 DraIII CAC_nnn'GTG Cuts at: 3375 3375 Size: 7393 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 6400 809 Size: 507 5084 1802 Fragments arranged by size: 5084 1802 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 3786 3801 4224 Size: 54 1425 50 275 18 1956 15 423 Cuts at: 4224 4840 5729 7358 8 Size: 616 889 1629 43 Fragments arranged by size: 1956 1629 1425 889 616 423 275 54 50 43 18 15 EagI C'GGCC_G Cuts at: 1537 1812 3786 3801 4840 1537 Size: 275 1974 15 1039 4090 Fragments arranged by size: 4090 1974 1039 275 15 EarI CTCTTCn'nnn_ Cuts at: 1353 2505 2651 3605 5323 1353 Size: 1152 146 954 1718 3423 Fragments arranged by size: 3423 1718 1152 954 146 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 2820 3911 4309 5980 6354 6500 Size: 1064 138 1231 1091 398 1671 374 146 Cuts at: 6500 387 Size: 1280 Fragments arranged by size: 1671 1280 1231 1091 1064 398 374 146 138 EcoICRI GAG'CTC Cuts at: 2562 3841 4570 2562 Size: 1279 729 5385 Fragments arranged by size: 5385 1279 729 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 2301 2355 2765 3264 3971 4689 5456 Size: 393 669 54 410 499 707 718 767 Cuts at: 5456 6053 6840 7108 1239 Size: 597 787 268 1524 Fragments arranged by size: 1524 787 767 718 707 669 597 499 410 393 268 54 EcoO109I rG'GnC_Cy Cuts at: 2580 3200 3430 4285 4286 2580 Size: 620 230 855 1 5687 Fragments arranged by size: 5687 855 620 230 1 EcoRI G'AATT_C Cuts at: 4609 4702 5080 4609 Size: 93 378 6922 Fragments arranged by size: 6922 378 93 EcoRV GAT'ATC Cuts at: 4384 4384 Size: 7393 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 4432 4432 Size: 7393 FseI GG_CCGG'CC Cuts at: 3803 3803 Size: 7393 FspI TGC'GCA Cuts at: 5899 5899 Size: 7393 HaeII r_GCGC'y Cuts at: 1678 3122 6540 1678 Size: 1444 3418 2531 Fragments arranged by size: 3418 2531 1444 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 2692 2707 2724 2739 3008 Size: 32 135 32 1120 15 17 15 269 Cuts at: 3008 3040 3143 3175 3302 3334 3535 3567 3722 Size: 32 103 32 127 32 201 32 155 Cuts at: 3722 3752 3754 3784 3815 3847 4098 4130 4647 Size: 30 2 30 31 32 251 32 517 Cuts at: 4647 4673 4679 4705 6034 6066 6108 6140 1373 Size: 26 6 26 1329 32 42 32 2626 Fragments arranged by size: 2626 1329 1120 517 269 251 201 155 135 127 103 42 32 32 32 32 32 32 32 32 32 32 31 30 30 26 26 17 15 15 6 2 HincII GTy'rAC Cuts at: 669 1657 1938 4737 4983 669 Size: 988 281 2799 246 3079 Fragments arranged by size: 3079 2799 988 281 246 HindIII A'AGCT_T Cuts at: 748 2259 2297 748 Size: 1511 38 5844 Fragments arranged by size: 5844 1511 38 HpaI GTT'AAC Cuts at: 4983 4983 Size: 7393 KasI G'GCGC_C Cuts at: 3118 3118 Size: 7393 KpnI G_GTAC'C Cuts at: 4718 4718 Size: 7393 MfeI C'AATT_G Cuts at: 4992 4992 Size: 7393 MluI A'CGCG_T Cuts at: 7269 7269 Size: 7393 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 4074 4450 6507 6691 1305 Size: 2769 376 2057 184 2007 Fragments arranged by size: 2769 2057 2007 376 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 10 Size: 54 1425 343 5571 Fragments arranged by size: 5571 1425 343 54 MslI CAynn'nnrTG Cuts at: 518 1166 3857 4220 5351 5710 5869 518 Size: 648 2691 363 1131 359 159 2042 Fragments arranged by size: 2691 2042 1131 648 363 359 159 MspA1I CmG'CkG Cuts at: 1606 2023 3356 3715 4123 4809 5486 6634 6879 Size: 417 1333 359 408 686 677 1148 245 Cuts at: 6879 1606 Size: 2120 Fragments arranged by size: 2120 1333 1148 686 677 417 408 359 245 NaeI GCC'GGC Cuts at: 3786 3801 3786 Size: 15 7378 NarI GG'CG_CC Cuts at: 3119 3119 Size: 7393 NcoI C'CATG_G Cuts at: 513 1065 2952 3393 513 Size: 552 1887 441 4513 Fragments arranged by size: 4513 1887 552 441 NdeI CA'TA_TG Cuts at: 387 387 Size: 7393 NgoMIV G'CCGG_C Cuts at: 3784 3799 3784 Size: 15 7378 NheI G'CTAG_C Cuts at: 1052 1052 Size: 7393 NotI GC'GGCC_GC Cuts at: 4840 4840 Size: 7393 NspI r_CATG'y Cuts at: 1132 1229 2547 4583 4751 6296 1132 Size: 97 1318 2036 168 1545 2229 Fragments arranged by size: 2229 2036 1545 1318 168 97 PasI CC'CwG_GG Cuts at: 1348 2998 1348 Size: 1650 5743 PciI A'CATG_T Cuts at: 2543 6292 2543 Size: 3749 3644 PflMI CCAn_nnn'nTGG Cuts at: 1108 3297 1108 Size: 2189 5204 PmeI GTTT'AAAC Cuts at: 4697 4697 Size: 7393 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 4568 4600 5462 5494 6975 7007 4568 Size: 32 862 32 1481 32 4954 Fragments arranged by size: 4954 1481 862 32 32 32 PpuMI rG'GwC_Cy Cuts at: 3200 3200 Size: 7393 PshAI GACnn'nnGTC Cuts at: 1613 1613 Size: 7393 PsiI TTA'TAA Cuts at: 4963 4963 Size: 7393 PspOMI G'GGCC_C Cuts at: 2580 4285 2580 Size: 1705 5688 PspXI vC'TCGA_Gb Cuts at: 3817 3817 Size: 7393 PstI C_TGCA'G Cuts at: 830 2536 3361 4745 830 Size: 1706 825 1384 3478 Fragments arranged by size: 3478 1706 1384 825 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 7393 PvuII CAG'CTG Cuts at: 2023 3356 3715 4123 2023 Size: 1333 359 408 5293 Fragments arranged by size: 5293 1333 408 359 SacI G_AGCT'C Cuts at: 2564 3843 4572 2564 Size: 1279 729 5385 Fragments arranged by size: 5385 1279 729 SalI G'TCGA_C Cuts at: 1936 4735 1936 Size: 2799 4594 SapI GCTCTTCn'nnn_ Cuts at: 2505 2651 3605 2505 Size: 146 954 6293 Fragments arranged by size: 6293 954 146 SbfI CC_TGCA'GG Cuts at: 4745 4745 Size: 7393 ScaI AGT'ACT Cuts at: 3061 5641 7353 3061 Size: 2580 1712 3101 Fragments arranged by size: 3101 2580 1712 SfcI C'TryA_G Cuts at: 826 1045 2532 3357 4483 4741 5876 6557 6748 Size: 219 1487 825 1126 258 1135 681 191 Cuts at: 6748 826 Size: 1471 Fragments arranged by size: 1487 1471 1135 1126 825 681 258 219 191 SfoI GGC'GCC Cuts at: 3120 3120 Size: 7393 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 7393 SgrAI Cr'CCGG_yG Cuts at: 1700 1700 Size: 7393 SmaI CCC'GGG Cuts at: 1872 4283 4720 1872 Size: 2411 437 4545 Fragments arranged by size: 4545 2411 437 SmlI C'TyrA_G Cuts at: 820 1017 1943 3053 3817 5497 6398 6660 820 Size: 197 926 1110 764 1680 901 262 1553 Fragments arranged by size: 1680 1553 1110 926 901 764 262 197 SnaBI TAC'GTA Cuts at: 493 5184 493 Size: 4691 2702 SpeI A'CTAG_T Cuts at: 152 152 Size: 7393 SphI G_CATG'C Cuts at: 1132 4751 1132 Size: 3619 3774 SspI AAT'ATT Cuts at: 5 52 4491 5317 5 Size: 47 4439 826 2081 Fragments arranged by size: 4439 2081 826 47 StuI AGG'CCT Cuts at: 1517 1517 Size: 7393 StyI C'CwwG_G Cuts at: 513 1065 2823 2858 2952 3393 3726 3777 4506 Size: 552 1758 35 94 441 333 51 729 Cuts at: 4506 4832 513 Size: 326 3074 Fragments arranged by size: 3074 1758 729 552 441 333 326 94 51 35 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 2079 2234 3631 5420 5437 5590 5775 Size: 1255 499 155 1397 1789 17 153 185 Cuts at: 5775 6220 325 Size: 445 1498 Fragments arranged by size: 1789 1498 1397 1255 499 445 185 155 153 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 3059 4197 5639 Size: 274 80 33 51 1443 1082 1138 1442 Cuts at: 5639 7351 96 Size: 1712 138 Fragments arranged by size: 1712 1443 1442 1138 1082 274 138 80 51 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 2783 2815 7353 7385 2783 Size: 32 4538 32 2791 Fragments arranged by size: 4538 2791 32 32 Tth111I GACn'n_nGTC Cuts at: 1316 2963 1316 Size: 1647 5746 XbaI T'CTAG_A Cuts at: 3235 4729 3235 Size: 1494 5899 XcmI CCAnnnn_n'nnnnTGG Cuts at: 2011 2011 Size: 7393 XhoI C'TCGA_G Cuts at: 1943 3817 1943 Size: 1874 5519 XmaI C'CCGG_G Cuts at: 1870 4281 4718 1870 Size: 2411 437 4545 Fragments arranged by size: 4545 2411 437 XmnI GAAnn'nnTTC Cuts at: 2298 5522 2298 Size: 3224 4169 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 5201 276 Size: 53 83 186 936 3667 2468 Fragments arranged by size: 3667 2468 936 186 83 53 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AflII AflIII AgeI AhdI AleI AlfI AloI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI AvrII BamHI BanI BanII BbeI BbsI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtgZI BtsI ClaI CspCI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoO109I EcoRI EcoRV FalI FseI FspI HaeII Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NotI NspI PasI PciI PflMI PmeI PpiI PpuMI PshAI PsiI PspOMI PspXI PstI PvuI PvuII SacI SalI SapI SbfI ScaI SfcI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AfeI AscI BaeI BbvCI BfrBI BsiWI BsmBI BstZ17I EcoNI FspAI NruI NsiI PacI PfoI PmlI PsrI RsrII SacII SanDI SexAI SfiI SrfI SwaI