Result of FASTA (omim) for
pFN21AB9448
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9448, 487 aa
1>>>pF1KB9448 487 - 487 aa - 487 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5049+/-0.000363; mu= 12.7719+/- 0.023
mean_var=97.9942+/-19.362, 0's: 0 Z-trim(115.0): 44 B-trim: 0 in 0/56
Lambda= 0.129561
statistics sampled from 25081 (25125) to 25081 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.295), width: 16
Scan time: 10.510
The best scores are: opt bits E(85289)
XP_016859659 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
XP_005246639 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
NP_001308242 (OMIM: 600800) NGFI-A-binding protein ( 487) 3199 608.5 1.4e-173
XP_005246640 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
XP_011509521 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
XP_016859665 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
NP_001308241 (OMIM: 600800) NGFI-A-binding protein ( 487) 3199 608.5 1.4e-173
NP_005957 (OMIM: 600800) NGFI-A-binding protein 1 ( 487) 3199 608.5 1.4e-173
XP_016859662 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
XP_016859661 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
XP_016859660 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
XP_016859663 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
NP_001308243 (OMIM: 600800) NGFI-A-binding protein ( 486) 3180 604.9 1.6e-172
XP_005246643 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
XP_016859664 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 457) 2195 420.8 4e-117
XP_005246644 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 457) 2195 420.8 4e-117
NP_001308244 (OMIM: 600800) NGFI-A-binding protein ( 457) 2195 420.8 4e-117
NP_001317234 (OMIM: 602381) NGFI-A-binding protein ( 461) 617 125.9 2.5e-28
NP_005958 (OMIM: 602381) NGFI-A-binding protein 2 ( 525) 617 125.9 2.8e-28
>>XP_016859659 (OMIM: 600800) PREDICTED: NGFI-A-binding (487 aa)
initn: 3199 init1: 3199 opt: 3199 Z-score: 3237.5 bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
430 440 450 460 470 480
pF1KB9 TEPEDSR
:::::::
XP_016 TEPEDSR
>>XP_005246639 (OMIM: 600800) PREDICTED: NGFI-A-binding (487 aa)
initn: 3199 init1: 3199 opt: 3199 Z-score: 3237.5 bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
430 440 450 460 470 480
pF1KB9 TEPEDSR
:::::::
XP_005 TEPEDSR
>>NP_001308242 (OMIM: 600800) NGFI-A-binding protein 1 i (487 aa)
initn: 3199 init1: 3199 opt: 3199 Z-score: 3237.5 bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
430 440 450 460 470 480
pF1KB9 TEPEDSR
:::::::
NP_001 TEPEDSR
>>XP_005246640 (OMIM: 600800) PREDICTED: NGFI-A-binding (487 aa)
initn: 3199 init1: 3199 opt: 3199 Z-score: 3237.5 bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
430 440 450 460 470 480
pF1KB9 TEPEDSR
:::::::
XP_005 TEPEDSR
>>XP_011509521 (OMIM: 600800) PREDICTED: NGFI-A-binding (487 aa)
initn: 3199 init1: 3199 opt: 3199 Z-score: 3237.5 bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
430 440 450 460 470 480
pF1KB9 TEPEDSR
:::::::
XP_011 TEPEDSR
>>XP_016859665 (OMIM: 600800) PREDICTED: NGFI-A-binding (487 aa)
initn: 3199 init1: 3199 opt: 3199 Z-score: 3237.5 bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
430 440 450 460 470 480
pF1KB9 TEPEDSR
:::::::
XP_016 TEPEDSR
>>NP_001308241 (OMIM: 600800) NGFI-A-binding protein 1 i (487 aa)
initn: 3199 init1: 3199 opt: 3199 Z-score: 3237.5 bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
430 440 450 460 470 480
pF1KB9 TEPEDSR
:::::::
NP_001 TEPEDSR
>>NP_005957 (OMIM: 600800) NGFI-A-binding protein 1 isof (487 aa)
initn: 3199 init1: 3199 opt: 3199 Z-score: 3237.5 bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
430 440 450 460 470 480
pF1KB9 TEPEDSR
:::::::
NP_005 TEPEDSR
>>XP_016859662 (OMIM: 600800) PREDICTED: NGFI-A-binding (486 aa)
initn: 2382 init1: 2382 opt: 3180 Z-score: 3218.4 bits: 604.9 E(85289): 1.6e-172
Smith-Waterman score: 3180; 99.8% identity (99.8% similar) in 487 aa overlap (1-487:1-486)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSQ-PEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
420 430 440 450 460 470
pF1KB9 TEPEDSR
:::::::
XP_016 TEPEDSR
480
>>XP_016859661 (OMIM: 600800) PREDICTED: NGFI-A-binding (486 aa)
initn: 2382 init1: 2382 opt: 3180 Z-score: 3218.4 bits: 604.9 E(85289): 1.6e-172
Smith-Waterman score: 3180; 99.8% identity (99.8% similar) in 487 aa overlap (1-487:1-486)
10 20 30 40 50 60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSQ-PEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
370 380 390 400 410
430 440 450 460 470 480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
420 430 440 450 460 470
pF1KB9 TEPEDSR
:::::::
XP_016 TEPEDSR
480
487 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 23:26:18 2016 done: Thu Nov 3 23:26:19 2016
Total Scan time: 10.510 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]