Result of FASTA (ccds) for
pFN21AB3715
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3715, 208 aa
1>>>pF1KB3715 208 - 208 aa - 208 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0184+/-0.000905; mu= 15.2589+/- 0.055
mean_var=79.4804+/-15.745, 0's: 0 Z-trim(106.8): 213 B-trim: 0 in 0/53
Lambda= 0.143861
statistics sampled from 8944 (9178) to 8944 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.282), width: 16
Scan time: 1.600
The best scores are: opt bits E(32554)
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 1348 289.1 1.3e-78
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 1257 270.2 6.4e-73
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 1246 267.9 3.1e-72
CCDS46408.1 RAB6C gene_id:84084|Hs108|chr2 ( 254) 1130 243.9 6.3e-65
CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2 ( 254) 1124 242.7 1.5e-64
CCDS58155.1 RAB6A gene_id:5870|Hs108|chr11 ( 175) 1037 224.5 3.1e-59
CCDS35322.2 RAB41 gene_id:347517|Hs108|chrX ( 221) 829 181.4 3.7e-46
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 559 125.4 2.7e-29
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 556 124.7 4.1e-29
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 556 124.8 4.5e-29
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 522 117.7 5.4e-27
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 504 113.9 7.2e-26
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 490 111.0 5.3e-25
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 490 111.1 5.5e-25
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 489 110.9 6.5e-25
CCDS75442.1 RAB44 gene_id:401258|Hs108|chr6 (1021) 496 112.9 7.1e-25
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 486 110.2 9e-25
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 485 110.0 1.1e-24
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 485 110.0 1.1e-24
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 483 109.6 1.5e-24
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 482 109.4 1.7e-24
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 478 108.5 2.8e-24
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 474 107.7 5.2e-24
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 473 107.5 6.3e-24
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 468 106.5 1.3e-23
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 468 106.5 1.3e-23
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 467 106.2 1.4e-23
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 464 105.6 2.2e-23
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 461 105.1 3.7e-23
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 460 104.8 3.8e-23
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 461 105.1 4e-23
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 460 104.8 4.2e-23
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 458 104.4 5.3e-23
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 453 103.4 1.1e-22
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 452 103.2 1.3e-22
CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 ( 212) 451 102.9 1.5e-22
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 449 102.6 2e-22
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 442 101.0 5e-22
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 439 100.4 8e-22
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 436 99.9 1.4e-21
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 434 99.4 1.7e-21
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 434 99.4 1.7e-21
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 432 99.0 2.3e-21
CCDS44803.1 CRACR2A gene_id:84766|Hs108|chr12 ( 731) 437 100.5 2.7e-21
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 430 98.6 3e-21
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 427 97.9 4.5e-21
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 426 97.8 5.5e-21
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 423 97.1 8.4e-21
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 420 96.5 1.3e-20
CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 ( 217) 417 95.9 2e-20
>>CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 (208 aa)
initn: 1348 init1: 1348 opt: 1348 Z-score: 1524.7 bits: 289.1 E(32554): 1.3e-78
Smith-Waterman score: 1348; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
130 140 150 160 170 180
190 200
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
::::::::::::::::::::::::::::
CCDS30 QEKSKEGMIDIKLDKPQEPPASEGGCSC
190 200
>>CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 (208 aa)
initn: 1257 init1: 1257 opt: 1257 Z-score: 1422.7 bits: 270.2 E(32554): 6.4e-73
Smith-Waterman score: 1257; 90.9% identity (99.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
:::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::
CCDS82 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
:::::::::::::::..:::::..::::.:::::::::.::::::::::::.::::::..
CCDS82 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
130 140 150 160 170 180
190 200
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
:..:.: ::::::.:::: :.:::::::
CCDS82 QDRSREDMIDIKLEKPQEQPVSEGGCSC
190 200
>>CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 (208 aa)
initn: 1246 init1: 1246 opt: 1246 Z-score: 1410.3 bits: 267.9 E(32554): 3.1e-72
Smith-Waterman score: 1246; 89.4% identity (99.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
:.::::::::::::::::::::::::..:::::::::.::::::.:::::::::::::::
CCDS82 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
:::::::::::::::..:::::..::::.:::::::::.::::::::::::.::::::..
CCDS82 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
130 140 150 160 170 180
190 200
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
:..:.: ::::::.:::: :.:::::::
CCDS82 QDRSREDMIDIKLEKPQEQPVSEGGCSC
190 200
>>CCDS46408.1 RAB6C gene_id:84084|Hs108|chr2 (254 aa)
initn: 1130 init1: 1130 opt: 1130 Z-score: 1279.1 bits: 243.9 E(32554): 6.3e-65
Smith-Waterman score: 1130; 82.2% identity (93.3% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::::::::::::::::::::::::.:::::::: :::::::::: ::::::::::::::
CCDS46 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
:. :.:::::::::.::::: :::::..:::::::::.::::::.:::::::::::::::
CCDS46 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
: ::::.::::::::...::::..:: :.: :::: ::.::::::::::::.::::::..
CCDS46 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST
130 140 150 160 170 180
190 200
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
:. :.: : ::::.:::: .:::::::
CCDS46 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL
190 200 210 220 230 240
>>CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2 (254 aa)
initn: 1124 init1: 1124 opt: 1124 Z-score: 1272.4 bits: 242.7 E(32554): 1.5e-64
Smith-Waterman score: 1124; 82.7% identity (92.8% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::::::::::::::::::::::::.:::::::: :::::::::: ::::::::::::::
CCDS82 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
:. :.:::::::::.::::: :::::..:::::::::.::::::.::::::::: :::::
CCDS82 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
: :::::::::::::..:::::..:: :.: :::: ::.::::::::::::.::::::..
CCDS82 ITLVGNKTDLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST
130 140 150 160 170 180
190 200
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
:. :.: : ::::.:::: .:::::::
CCDS82 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL
190 200 210 220 230 240
>>CCDS58155.1 RAB6A gene_id:5870|Hs108|chr11 (175 aa)
initn: 1037 init1: 1037 opt: 1037 Z-score: 1176.9 bits: 224.5 E(32554): 3.1e-59
Smith-Waterman score: 1037; 88.0% identity (98.9% similar) in 175 aa overlap (34-208:1-175)
10 20 30 40 50 60
pF1KB3 GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR
::::::::::::::::::::::::::::.:
CCDS58 MYDSFDNTYQATIGIDFLSKTMYLEDRTIR
10 20 30
70 80 90 100 110 120
pF1KB3 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIML
:::::::::::::::::::::::..:::::::::.::::::.::::::::::::::::::
CCDS58 LQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIML
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB3 VGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEK
::::::::::::..:::::..::::.:::::::::.::::::::::::.::::::..:..
CCDS58 VGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDR
100 110 120 130 140 150
190 200
pF1KB3 SKEGMIDIKLDKPQEPPASEGGCSC
:.: ::::::.:::: :.:::::::
CCDS58 SREDMIDIKLEKPQEQPVSEGGCSC
160 170
>>CCDS35322.2 RAB41 gene_id:347517|Hs108|chrX (221 aa)
initn: 822 init1: 762 opt: 829 Z-score: 942.2 bits: 181.4 E(32554): 3.7e-46
Smith-Waterman score: 829; 65.2% identity (85.0% similar) in 207 aa overlap (1-198:11-214)
10 20 30 40
pF1KB3 MSAGGDFG---------NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNT
: ::: :: . : : ::.:::::: ::::.:.::::.:: .
CCDS35 MSAFGHDEAWMEAGG-FGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCA
10 20 30 40 50
50 60 70 80 90 100
pF1KB3 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSF
:::.:::::::::::::. :.::::::::::::.:::::::::::.:::::::::.:::
CCDS35 CQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSF
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB3 QQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGY
..:.::.. ::.:::.::.:::.::: :: .:::.: :.::.....:.::::::::::::
CCDS35 KETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGY
120 130 140 150 160 170
170 180 190 200
pF1KB3 NVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC
:::.::::::::: . .. . ::: ..:.:.. .:
CCDS35 NVKKLFRRVASALLSTRT-SPPPKEGTVEIELESFEESGNRSYC
180 190 200 210 220
>>CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 (215 aa)
initn: 563 init1: 543 opt: 559 Z-score: 639.5 bits: 125.4 E(32554): 2.7e-29
Smith-Waterman score: 559; 42.2% identity (74.3% similar) in 206 aa overlap (4-207:11-214)
10 20 30 40 50
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSK
: . :: . .::::.:::..:::.::. ::. .: . ..::: ::..
CCDS26 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRT
:. :.: ::....::::::::..:: : : : . .:.::::::: .:: ....:. ...
CCDS26 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 ERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASA
. . ...: : :::.:::.:: . ..:... : . :..:.::::::..::...: .:.
CCDS26 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
130 140 150 160 170 180
180 190 200
pF1KB3 LPGME--NVQEKSKEGMIDIKLDKPQEPPASEGGCSC
:: : : .: .: . : .: .: .. ::
CCDS26 LPKNEPQNPGANSARGR-GVDLTEPTQPTRNQC-CSN
190 200 210
>>CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 (216 aa)
initn: 554 init1: 537 opt: 556 Z-score: 636.2 bits: 124.7 E(32554): 4.1e-29
Smith-Waterman score: 556; 41.5% identity (74.1% similar) in 205 aa overlap (4-208:12-214)
10 20 30 40 50
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLS
: :: . .::::.:::..:::.::. ::. .: . ..::: ::.
CCDS11 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 KTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVR
.:. :.: ::....::::::::..:: : : : . .:.::::::: ..: ....:. ...
CCDS11 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 TERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAS
. . ...: :.:::.:::.:: . ..:.. : . :..:.::::::..::...: .:.
CCDS11 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200
pF1KB3 ALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC
:: : . . : . .: .. :::.. : :
CCDS11 KLPKNEPQNATGAPGR-NRGVDLQENNPASRSQC-CSN
190 200 210
>>CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 (249 aa)
initn: 554 init1: 537 opt: 556 Z-score: 635.4 bits: 124.8 E(32554): 4.5e-29
Smith-Waterman score: 556; 41.5% identity (74.1% similar) in 205 aa overlap (4-208:45-247)
10 20 30
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRF
: :: . .::::.:::..:::.::. ::
CCDS58 LHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRF
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB3 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVY
. .: . ..::: ::..:. :.: ::....::::::::..:: : : : . .:.:::
CCDS58 VKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVY
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB3 DITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFI
:::: ..: ....:. ... . . ...: :.:::.:::.:: . ..:.. : . :..:.
CCDS58 DITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFM
140 150 160 170 180 190
160 170 180 190 200
pF1KB3 ETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC
::::::..::...: .:. :: : . . : . .: .. :::.. : :
CCDS58 ETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGR-NRGVDLQENNPASRSQC-CSN
200 210 220 230 240
208 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 21:10:11 2016 done: Thu Nov 3 21:10:11 2016
Total Scan time: 1.600 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]