FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA0487, 180 aa 1>>>pF1KA0487 180 - 180 aa - 180 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5571+/-0.00028; mu= 17.4193+/- 0.018 mean_var=64.7529+/-12.844, 0's: 0 Z-trim(118.3): 23 B-trim: 0 in 0/60 Lambda= 0.159384 statistics sampled from 31147 (31172) to 31147 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.365), width: 16 Scan time: 6.080 The best scores are: opt bits E(85289) NP_061967 (OMIM: 609229) diphosphoinositol polypho ( 180) 1217 287.7 7e-78 NP_950241 (OMIM: 609229) diphosphoinositol polypho ( 181) 1205 284.9 4.8e-77 NP_060629 (OMIM: 300528) diphosphoinositol polypho ( 164) 1005 238.9 3.1e-63 NP_001291892 (OMIM: 300527) diphosphoinositol poly ( 164) 995 236.6 1.5e-62 NP_694853 (OMIM: 300527) diphosphoinositol polypho ( 164) 995 236.6 1.5e-62 XP_011536098 (OMIM: 609229) PREDICTED: diphosphoin ( 128) 850 203.1 1.4e-52 NP_001287953 (OMIM: 609229) diphosphoinositol poly ( 128) 850 203.1 1.4e-52 XP_011536097 (OMIM: 609229) PREDICTED: diphosphoin ( 128) 850 203.1 1.4e-52 NP_001287952 (OMIM: 609229) diphosphoinositol poly ( 128) 850 203.1 1.4e-52 NP_006694 (OMIM: 609228) diphosphoinositol polypho ( 172) 845 202.1 3.8e-52 NP_001287951 (OMIM: 609229) diphosphoinositol poly ( 129) 838 200.4 9.5e-52 XP_011536096 (OMIM: 609229) PREDICTED: diphosphoin ( 129) 838 200.4 9.5e-52 NP_009014 (OMIM: 606261) nucleoside diphosphate-li ( 316) 152 43.0 0.00055 NP_932158 (OMIM: 606261) nucleoside diphosphate-li ( 147) 141 40.2 0.0018 NP_671701 (OMIM: 602852) NUDT2 gene product [Homo ( 147) 138 39.5 0.003 NP_671702 (OMIM: 602852) NUDT2 gene product [Homo ( 147) 138 39.5 0.003 NP_001231319 (OMIM: 602852) NUDT2 gene product [Ho ( 147) 138 39.5 0.003 NP_001152 (OMIM: 602852) NUDT2 gene product [Homo ( 147) 138 39.5 0.003 NP_001229306 (OMIM: 609844) m7GpppN-mRNA hydrolase ( 385) 138 39.9 0.0059 XP_016864652 (OMIM: 609844) PREDICTED: m7GpppN-mRN ( 405) 138 39.9 0.0062 NP_689837 (OMIM: 609844) m7GpppN-mRNA hydrolase is ( 420) 138 39.9 0.0063 >>NP_061967 (OMIM: 609229) diphosphoinositol polyphospha (180 aa) initn: 1217 init1: 1217 opt: 1217 Z-score: 1519.2 bits: 287.7 E(85289): 7e-78 Smith-Waterman score: 1217; 100.0% identity (100.0% similar) in 180 aa overlap (1-180:1-180) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR 130 140 150 160 170 180 >>NP_950241 (OMIM: 609229) diphosphoinositol polyphospha (181 aa) initn: 654 init1: 637 opt: 1205 Z-score: 1504.2 bits: 284.9 E(85289): 4.8e-77 Smith-Waterman score: 1205; 99.4% identity (99.4% similar) in 181 aa overlap (1-180:1-181) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_950 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG 10 20 30 40 50 60 70 80 90 100 110 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: NP_950 GAAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW 70 80 90 100 110 120 120 130 140 150 160 170 pF1KA0 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_950 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV 130 140 150 160 170 180 180 pF1KA0 R : NP_950 R >>NP_060629 (OMIM: 300528) diphosphoinositol polyphospha (164 aa) initn: 1023 init1: 543 opt: 1005 Z-score: 1256.2 bits: 238.9 E(85289): 3.1e-63 Smith-Waterman score: 1005; 90.8% identity (96.3% similar) in 163 aa overlap (2-163:1-163) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :: ::::::::: :::::::::::::::.::::::::::::::.::::::::::::::: NP_060 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG 10 20 30 40 50 70 80 90 100 110 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW ::::::::::::::::::::::.:: :::::::::::::::::.::::::::.::::::: NP_060 GAAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREW 60 70 80 90 100 110 120 130 140 150 160 170 pF1KA0 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV ::::::::::::::::::::::::::: ::.:::: .:: ::.. NP_060 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 120 130 140 150 160 180 pF1KA0 R >>NP_001291892 (OMIM: 300527) diphosphoinositol polyphos (164 aa) initn: 995 init1: 542 opt: 995 Z-score: 1243.8 bits: 236.6 E(85289): 1.5e-62 Smith-Waterman score: 995; 90.2% identity (95.7% similar) in 163 aa overlap (2-163:1-163) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :: ::::::::: :::::::::::::::.::::::::::::::.::::::::::::::: NP_001 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG 10 20 30 40 50 70 80 90 100 110 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW ::::::::::::::::::::::.:: ::: :::::::::::::.::::::::.::::::: NP_001 GAAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREW 60 70 80 90 100 110 120 130 140 150 160 170 pF1KA0 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV ::::::::::::::::::::::::::: ::.:::: .:: ::.. NP_001 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 120 130 140 150 160 180 pF1KA0 R >>NP_694853 (OMIM: 300527) diphosphoinositol polyphospha (164 aa) initn: 995 init1: 542 opt: 995 Z-score: 1243.8 bits: 236.6 E(85289): 1.5e-62 Smith-Waterman score: 995; 90.2% identity (95.7% similar) in 163 aa overlap (2-163:1-163) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :: ::::::::: :::::::::::::::.::::::::::::::.::::::::::::::: NP_694 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG 10 20 30 40 50 70 80 90 100 110 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW ::::::::::::::::::::::.:: ::: :::::::::::::.::::::::.::::::: NP_694 GAAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREW 60 70 80 90 100 110 120 130 140 150 160 170 pF1KA0 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV ::::::::::::::::::::::::::: ::.:::: .:: ::.. NP_694 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 120 130 140 150 160 180 pF1KA0 R >>XP_011536098 (OMIM: 609229) PREDICTED: diphosphoinosit (128 aa) initn: 850 init1: 850 opt: 850 Z-score: 1065.0 bits: 203.1 E(85289): 1.4e-52 Smith-Waterman score: 850; 100.0% identity (100.0% similar) in 128 aa overlap (53-180:1-128) 30 40 50 60 70 80 pF1KA0 CLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLG :::::::::::::::::::::::::::::: XP_011 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG 10 20 30 90 100 110 120 130 140 pF1KA0 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK 40 50 60 70 80 90 150 160 170 180 pF1KA0 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :::::::::::::::::::::::::::::::::::::: XP_011 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR 100 110 120 >>NP_001287953 (OMIM: 609229) diphosphoinositol polyphos (128 aa) initn: 850 init1: 850 opt: 850 Z-score: 1065.0 bits: 203.1 E(85289): 1.4e-52 Smith-Waterman score: 850; 100.0% identity (100.0% similar) in 128 aa overlap (53-180:1-128) 30 40 50 60 70 80 pF1KA0 CLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLG :::::::::::::::::::::::::::::: NP_001 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG 10 20 30 90 100 110 120 130 140 pF1KA0 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK 40 50 60 70 80 90 150 160 170 180 pF1KA0 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :::::::::::::::::::::::::::::::::::::: NP_001 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR 100 110 120 >>XP_011536097 (OMIM: 609229) PREDICTED: diphosphoinosit (128 aa) initn: 850 init1: 850 opt: 850 Z-score: 1065.0 bits: 203.1 E(85289): 1.4e-52 Smith-Waterman score: 850; 100.0% identity (100.0% similar) in 128 aa overlap (53-180:1-128) 30 40 50 60 70 80 pF1KA0 CLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLG :::::::::::::::::::::::::::::: XP_011 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG 10 20 30 90 100 110 120 130 140 pF1KA0 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK 40 50 60 70 80 90 150 160 170 180 pF1KA0 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :::::::::::::::::::::::::::::::::::::: XP_011 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR 100 110 120 >>NP_001287952 (OMIM: 609229) diphosphoinositol polyphos (128 aa) initn: 850 init1: 850 opt: 850 Z-score: 1065.0 bits: 203.1 E(85289): 1.4e-52 Smith-Waterman score: 850; 100.0% identity (100.0% similar) in 128 aa overlap (53-180:1-128) 30 40 50 60 70 80 pF1KA0 CLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLG :::::::::::::::::::::::::::::: NP_001 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG 10 20 30 90 100 110 120 130 140 pF1KA0 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK 40 50 60 70 80 90 150 160 170 180 pF1KA0 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :::::::::::::::::::::::::::::::::::::: NP_001 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR 100 110 120 >>NP_006694 (OMIM: 609228) diphosphoinositol polyphospha (172 aa) initn: 845 init1: 845 opt: 845 Z-score: 1057.1 bits: 202.1 E(85289): 3.8e-52 Smith-Waterman score: 845; 79.1% identity (90.5% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :::.: ::::::: .:.::::::::::::.:.:::::::::.::.::::::::::::::. NP_006 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF :::::: ::::::: ::::.::::::.:::::::::: :::.::::::::::::::::: NP_006 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :.:::::::: ::::.: :.: :. : : ::. .: . NP_006 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR 130 140 150 160 170 180 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 19:42:53 2016 done: Thu Nov 3 19:42:54 2016 Total Scan time: 6.080 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]