Result of FASTA (omim) for
pFN21AB5122
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5122, 514 aa
1>>>pF1KB5122 514 - 514 aa - 514 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9793+/-0.000535; mu= 10.4559+/- 0.033
mean_var=209.0046+/-46.772, 0's: 0 Z-trim(112.5): 374 B-trim: 0 in 0/53
Lambda= 0.088715
statistics sampled from 20921 (21425) to 20921 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.6), E-opt: 0.2 (0.251), width: 16
Scan time: 8.370
The best scores are: opt bits E(85289)
NP_001308123 (OMIM: 270710,602342,608628,616944) F ( 514) 3472 458.3 2.5e-128
XP_011511444 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
XP_005247832 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
XP_011511443 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
XP_016862674 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
NP_078941 (OMIM: 270710,602342,608628,616944) F-bo ( 514) 3472 458.3 2.5e-128
XP_011511445 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
XP_006713809 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
NP_001308122 (OMIM: 270710,602342,608628,616944) F ( 514) 3472 458.3 2.5e-128
NP_001308124 (OMIM: 270710,602342,608628,616944) F ( 427) 2928 388.6 2e-107
NP_001132940 (OMIM: 300196) F-box-like/WD repeat-c ( 526) 2486 332.1 2.4e-90
NP_001132939 (OMIM: 300196) F-box-like/WD repeat-c ( 526) 2486 332.1 2.4e-90
XP_011543873 (OMIM: 300196) PREDICTED: F-box-like/ ( 526) 2486 332.1 2.4e-90
NP_001132938 (OMIM: 300196) F-box-like/WD repeat-c ( 577) 2486 332.2 2.6e-90
NP_005638 (OMIM: 300196) F-box-like/WD repeat-cont ( 577) 2486 332.2 2.6e-90
NP_150600 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 2464 329.3 1.7e-89
NP_599021 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 2464 329.3 1.7e-89
NP_599020 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 2464 329.3 1.7e-89
XP_005262629 (OMIM: 400033) PREDICTED: F-box-like/ ( 536) 2464 329.3 1.7e-89
XP_016885576 (OMIM: 400033) PREDICTED: F-box-like/ ( 540) 2423 324.1 6.6e-88
XP_016885575 (OMIM: 400033) PREDICTED: F-box-like/ ( 577) 2423 324.1 6.9e-88
NP_004795 (OMIM: 604333) probable cytosolic iron-s ( 339) 398 64.6 5.2e-10
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357) 364 60.3 1.1e-08
NP_001246 (OMIM: 603618) cell division cycle prote ( 499) 328 55.9 3.3e-07
NP_004757 (OMIM: 606990) coatomer subunit beta' [H ( 906) 292 51.6 1.2e-05
NP_115737 (OMIM: 606929) THO complex subunit 3 [Ho ( 351) 279 49.4 2e-05
XP_016863001 (OMIM: 606990) PREDICTED: coatomer su ( 877) 284 50.6 2.3e-05
XP_016865474 (OMIM: 606929) PREDICTED: THO complex ( 263) 275 48.8 2.4e-05
NP_055317 (OMIM: 608330) pre-mRNA-processing facto ( 504) 264 47.7 9.7e-05
NP_065851 (OMIM: 611177,611263) intraflagellar tra ( 777) 266 48.2 0.00011
NP_057347 (OMIM: 603619) fizzy-related protein hom ( 493) 262 47.4 0.00011
XP_005259630 (OMIM: 603619) PREDICTED: fizzy-relat ( 496) 262 47.4 0.00011
NP_001129670 (OMIM: 603619) fizzy-related protein ( 496) 262 47.4 0.00011
NP_003571 (OMIM: 603043) protein FAN isoform 1 [Ho ( 917) 266 48.3 0.00012
XP_016882352 (OMIM: 603619) PREDICTED: fizzy-relat ( 528) 262 47.5 0.00012
NP_001138244 (OMIM: 603043) protein FAN isoform 2 ( 948) 266 48.3 0.00012
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360) 255 46.4 0.00017
XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301) 250 45.6 0.00024
NP_001129669 (OMIM: 603619) fizzy-related protein ( 404) 252 46.0 0.00024
XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353) 250 45.7 0.00027
NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353) 250 45.7 0.00027
NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395) 250 45.8 0.00029
NP_001151 (OMIM: 602233) apoptotic protease-activa (1194) 253 46.8 0.00044
NP_863658 (OMIM: 602233) apoptotic protease-activa (1205) 253 46.8 0.00044
NP_037361 (OMIM: 602233) apoptotic protease-activa (1237) 253 46.8 0.00045
NP_863651 (OMIM: 602233) apoptotic protease-activa (1248) 253 46.8 0.00045
NP_003380 (OMIM: 602159) coronin-2A [Homo sapiens] ( 525) 245 45.3 0.00053
NP_438171 (OMIM: 602159) coronin-2A [Homo sapiens] ( 525) 245 45.3 0.00053
XP_011517288 (OMIM: 602159) PREDICTED: coronin-2A ( 525) 245 45.3 0.00053
NP_620640 (OMIM: 601787) transcription initiation ( 745) 246 45.6 0.00061
>>NP_001308123 (OMIM: 270710,602342,608628,616944) F-box (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
NP_001 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>XP_011511444 (OMIM: 270710,602342,608628,616944) PREDI (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
XP_011 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>XP_005247832 (OMIM: 270710,602342,608628,616944) PREDI (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
XP_005 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>XP_011511443 (OMIM: 270710,602342,608628,616944) PREDI (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
XP_011 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>XP_016862674 (OMIM: 270710,602342,608628,616944) PREDI (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
XP_016 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>NP_078941 (OMIM: 270710,602342,608628,616944) F-box-li (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
NP_078 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>XP_011511445 (OMIM: 270710,602342,608628,616944) PREDI (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
XP_011 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>XP_006713809 (OMIM: 270710,602342,608628,616944) PREDI (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
XP_006 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>NP_001308122 (OMIM: 270710,602342,608628,616944) F-box (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2425.0 bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
NP_001 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>NP_001308124 (OMIM: 270710,602342,608628,616944) F-box (427 aa)
initn: 2928 init1: 2928 opt: 2928 Z-score: 2049.6 bits: 388.6 E(85289): 2e-107
Smith-Waterman score: 2928; 100.0% identity (100.0% similar) in 427 aa overlap (88-514:1-427)
60 70 80 90 100 110
pF1KB5 QYVEAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAA
::::::::::::::::::::::::::::::
NP_001 MPDVVQTRQQAYRDKLAQQQAAAAAAAAAA
10 20 30
120 130 140 150 160 170
pF1KB5 ASQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAW
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 NPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEG
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 TLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB5 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLAS
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB5 ASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV
340 350 360 370 380 390
480 490 500 510
pF1KB5 HSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
:::::::::::::::::::::::::::::::::::::
NP_001 HSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
400 410 420
514 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 16:08:14 2016 done: Thu Nov 3 16:08:15 2016
Total Scan time: 8.370 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]