Result of FASTA (ccds) for
pFN21AB5122
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5122, 514 aa
1>>>pF1KB5122 514 - 514 aa - 514 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4104+/-0.00132; mu= 1.8621+/- 0.077
mean_var=179.9863+/-39.116, 0's: 0 Z-trim(105.1): 178 B-trim: 0 in 0/51
Lambda= 0.095599
statistics sampled from 8040 (8241) to 8040 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.253), width: 16
Scan time: 3.220
The best scores are: opt bits E(32554)
CCDS46961.1 TBL1XR1 gene_id:79718|Hs108|chr3 ( 514) 3472 492.2 5.9e-139
CCDS48078.1 TBL1X gene_id:6907|Hs108|chrX ( 526) 2486 356.2 5.2e-98
CCDS14133.1 TBL1X gene_id:6907|Hs108|chrX ( 577) 2486 356.2 5.6e-98
CCDS14779.1 TBL1Y gene_id:90665|Hs108|chrY ( 522) 2464 353.2 4.2e-97
CCDS2019.1 CIAO1 gene_id:9391|Hs108|chr2 ( 339) 398 68.1 1.8e-11
>>CCDS46961.1 TBL1XR1 gene_id:79718|Hs108|chr3 (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 2608.2 bits: 492.2 E(32554): 5.9e-139
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
430 440 450 460 470 480
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
::::::::::::::::::::::::::::::::::
CCDS46 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
490 500 510
>>CCDS48078.1 TBL1X gene_id:6907|Hs108|chrX (526 aa)
initn: 2400 init1: 2400 opt: 2486 Z-score: 1873.1 bits: 356.2 E(32554): 5.2e-98
Smith-Waterman score: 3118; 86.3% identity (94.9% similar) in 527 aa overlap (1-514:1-526)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
:::.:::::::::::::::::::::::::::::::::::::.::::::::::.:::::::
CCDS48 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYV
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAA--
:::.:::::::.::::::::::::::::::::::::::.:.:::::::.::::::::.
CCDS48 EAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAA
70 80 90 100 110 120
120 130 140 150 160
pF1KB5 -----------SQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRG
:.:. .:: : :.::::: ::.. :::. ::.::.:::: .::.::::
CCDS48 ATAATTTSAGVSHQNPSKNREATVNGEENRAHSV-NNHAKPMEIDGEVEIPSSKATVLRG
130 140 150 160 170
170 180 190 200 210 220
pF1KB5 HESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKD
:::::::::::::::::::::::::::::::.:::..:::::::::::::::.:::::::
CCDS48 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKD
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 VTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD
:::::::..:::::::::::::::::.:::::::::::::::::::::.:::.:::::::
CCDS48 VTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVD
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQG
::::::::::::::::::::::::::::::.:.::::::::::::::.:: :::.:::::
CCDS48 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQG
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB5 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN
::::::::::::.: ::::::::::::::::::. :.::::::::::::::::::::.:.
CCDS48 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATS
360 370 380 390 400 410
410 420 430 440 450 460
pF1KB5 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH
:::.:.:::::::::::::::..::.: :::::::::::::::::::.::::::::::::
CCDS48 NPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVH
420 430 440 450 460 470
470 480 490 500 510
pF1KB5 IWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
:::::.: :::::::::::::::::: ::::::::::::::::::::
CCDS48 IWNTQSGNLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
480 490 500 510 520
>>CCDS14133.1 TBL1X gene_id:6907|Hs108|chrX (577 aa)
initn: 2400 init1: 2400 opt: 2486 Z-score: 1872.5 bits: 356.2 E(32554): 5.6e-98
Smith-Waterman score: 3118; 86.3% identity (94.9% similar) in 527 aa overlap (1-514:52-577)
10 20 30
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGI
:::.::::::::::::::::::::::::::
CCDS14 QSVLHHFQRLRGREGGSHFINTSSPRGEAKMSITSDEVNFLVYRYLQESGFSHSAFTFGI
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB5 ESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLIDAVMPD
:::::::::::.::::::::::.::::::::::.:::::::.::::::::::::::::::
CCDS14 ESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPD
90 100 110 120 130 140
100 110 120 130
pF1KB5 VVQTRQQAYRDKLAQQQAAAAAAAAAAA-------------SQQGSAKNGENTANGEENG
::::::::.:.:::::::.::::::::. :.:. .:: : :.:::::
CCDS14 VVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSKNREATVNGEENR
150 160 170 180 190 200
140 150 160 170 180 190
pF1KB5 AHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWN
::.. :::. ::.::.:::: .::.::::::::::::::::::::::::::::::::::
CCDS14 AHSV-NNHAKPMEIDGEVEIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWN
210 220 230 240 250 260
200 210 220 230 240 250
pF1KB5 LSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN
:.:::..:::::::::::::::.::::::::::::::..:::::::::::::::::.:::
CCDS14 LNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGN
270 280 290 300 310 320
260 270 280 290 300 310
pF1KB5 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ
::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::::::
CCDS14 LASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ
330 340 350 360 370 380
320 330 340 350 360 370
pF1KB5 SNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS
.:.::::::::::::::.:: :::.:::::::::::::::::.: :::::::::::::::
CCDS14 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS
390 400 410 420 430 440
380 390 400 410 420 430
pF1KB5 MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT
:::. :.::::::::::::::::::::.:.:::.:.:::::::::::::::..::.: ::
CCDS14 MKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHT
450 460 470 480 490 500
440 450 460 470 480 490
pF1KB5 LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDK
:::::::::::::::::.:::::::::::::::::.: :::::::::::::::::: :::
CCDS14 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDK
510 520 530 540 550 560
500 510
pF1KB5 VGASASDGSVCVLDLRK
:::::::::::::::::
CCDS14 VGASASDGSVCVLDLRK
570
>>CCDS14779.1 TBL1Y gene_id:90665|Hs108|chrY (522 aa)
initn: 2375 init1: 2375 opt: 2464 Z-score: 1856.7 bits: 353.2 E(32554): 4.2e-97
Smith-Waterman score: 3032; 84.9% identity (93.7% similar) in 523 aa overlap (1-512:1-522)
10 20 30 40 50 60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
:::.:::::::::::::::::::::::::::::::::::::.::::.:::::.:::::::
CCDS14 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYV
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAA-----
:::.:::.:::.::.::::::::: ::.::::: ::::. .::.::::.:::. :
CCDS14 EAEISINKDGTVFDSRPIESLSLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAK
70 80 90 100 110 120
120 130 140 150 160
pF1KB5 ------AAASQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHE
:: :::. :: : :.:::::::: : :::. ::.:::::::::::.::::::
CCDS14 AATMTPAAISQQNPPKNREATVNGEENGAHEI-NNHSKPMEIDGDVEIPPNKATVLRGHE
130 140 150 160 170
170 180 190 200 210 220
pF1KB5 SEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVT
:::::::::::::::::::::::::::::.:::..:::::::::::::::.:::::::::
CCDS14 SEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVT
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 SLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKT
::::::.::::: :::::::::::..::::::::::::::::::::::::..::::::::
CCDS14 SLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKT
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 TIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHT
::::::::::::::::::::::::::::.: ::::::::::::::.:: :.:.:::::::
CCDS14 TIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHT
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB5 NEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNP
::::::::::.: ::::::::::::::::::: ::::::::.:::::::::::::.:.::
CCDS14 NEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNP
360 370 380 390 400 410
410 420 430 440 450 460
pF1KB5 NANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW
:...::::::::::::::::..:.: ::: :::::::::::::::.::::::::: ::::
CCDS14 NSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIW
420 430 440 450 460 470
470 480 490 500 510
pF1KB5 NTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
:::.:.:::::.:::::::::::: ::::::::::::::::::
CCDS14 NTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSVCVLDL
480 490 500 510 520
>>CCDS2019.1 CIAO1 gene_id:9391|Hs108|chr2 (339 aa)
initn: 463 init1: 156 opt: 398 Z-score: 319.5 bits: 68.1 E(32554): 1.8e-11
Smith-Waterman score: 408; 32.4% identity (54.1% similar) in 259 aa overlap (222-469:11-221)
200 210 220 230 240
pF1KB5 TARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTS--LDWNSEGTLLATGSYDGFA
::.. : : :: :::::. . :
CCDS20 MKDSLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRI
10 20 30 40
250 260 270 280 290 300
pF1KB5 RIWTKDGN---LASTLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFP
::: .:. :.:.. :. . . :. ::.. ::. : :: :: :.:
CCDS20 RIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK------KNQDD
50 60 70 80 90
310 320 330 340 350 360
pF1KB5 FHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA
:. :. :..:: :::... : :.:::::
CCDS20 FE----------------------CV-----------TTLEGHENEVKSVAWAPSGNLLA
100 110 120
370 380 390 400 410 420
pF1KB5 SCSDDMTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDS
.:: : .. .: . ... :: :..:.... . : :. .:::::.:.
CCDS20 TCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE---------LLASASYDD
130 140 150 160 170
430 440 450 460 470 480
pF1KB5 TVRLW--DVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
::.:. . : .: :: :. :.:.::.:.:. ::: : :. :.::
CCDS20 TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV
180 190 200 210 220 230
490 500 510
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
CCDS20 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF
240 250 260 270 280 290
514 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 16:08:13 2016 done: Thu Nov 3 16:08:13 2016
Total Scan time: 3.220 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]