Result of FASTA (omim) for
pFN21AB5006
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5006, 459 aa
1>>>pF1KB5006 459 - 459 aa - 459 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8538+/-0.000386; mu= 15.7839+/- 0.024
mean_var=94.9851+/-18.940, 0's: 0 Z-trim(114.2): 146 B-trim: 19 in 1/50
Lambda= 0.131597
statistics sampled from 23785 (23938) to 23785 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.281), width: 16
Scan time: 9.770
The best scores are: opt bits E(85289)
NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans ( 459) 2992 578.6 1.2e-164
XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-pr ( 414) 2708 524.6 1.9e-148
NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 1730 339.0 1.6e-92
NP_004108 (OMIM: 602623,608516) peptidyl-prolyl ci ( 457) 1730 339.0 1.6e-92
NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 1730 339.0 1.6e-92
NP_001139249 (OMIM: 602623,608516) peptidyl-prolyl ( 268) 897 180.7 4.3e-45
NP_000792 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 338 74.2 1.9e-13
NP_463460 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 338 74.2 1.9e-13
NP_004107 (OMIM: 600620) peptidyl-prolyl cis-trans ( 108) 322 71.2 1.6e-12
XP_011526165 (OMIM: 604840) PREDICTED: peptidyl-pr ( 413) 313 69.9 1.4e-11
NP_036313 (OMIM: 604840) peptidyl-prolyl cis-trans ( 413) 313 69.9 1.4e-11
NP_001295302 (OMIM: 604840) peptidyl-prolyl cis-tr ( 412) 311 69.6 1.9e-11
XP_011513417 (OMIM: 616257) PREDICTED: peptidyl-pr ( 359) 300 67.4 7.1e-11
NP_009201 (OMIM: 616257) peptidyl-prolyl cis-trans ( 570) 300 67.6 1e-10
XP_005273905 (OMIM: 186946) PREDICTED: peptidyl-pr ( 142) 291 65.4 1.1e-10
NP_476433 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 291 65.4 1.1e-10
NP_001128680 (OMIM: 186946) peptidyl-prolyl cis-tr ( 142) 291 65.4 1.1e-10
NP_004461 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 291 65.4 1.1e-10
XP_011534867 (OMIM: 186947) PREDICTED: peptidyl-pr ( 191) 287 64.7 2.4e-10
NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans ( 370) 290 65.5 2.7e-10
NP_002004 (OMIM: 186947) peptidyl-prolyl cis-trans ( 224) 287 64.8 2.7e-10
XP_011526166 (OMIM: 604840) PREDICTED: peptidyl-pr ( 383) 290 65.5 2.8e-10
NP_001309893 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 264 60.1 2.5e-09
XP_016859082 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 264 60.1 2.5e-09
XP_016859084 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 264 60.1 2.5e-09
XP_016859083 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 264 60.1 2.5e-09
NP_001309892 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 264 60.1 2.5e-09
XP_016859085 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 264 60.1 2.5e-09
NP_071393 (OMIM: 617076) FK506-binding protein-lik ( 349) 272 62.1 2.8e-09
NP_068758 (OMIM: 259450,607063,610968) peptidyl-pr ( 582) 268 61.5 7e-09
XP_016868231 (OMIM: 604839) PREDICTED: inactive pe ( 266) 262 60.1 8.4e-09
XP_006716216 (OMIM: 604839) PREDICTED: inactive pe ( 282) 262 60.1 8.8e-09
XP_016868230 (OMIM: 604839) PREDICTED: inactive pe ( 317) 262 60.2 9.6e-09
NP_001128683 (OMIM: 604839) inactive peptidyl-prol ( 322) 262 60.2 9.7e-09
NP_003593 (OMIM: 604839) inactive peptidyl-prolyl ( 327) 262 60.2 9.9e-09
NP_001289888 (OMIM: 102200,219090,600634,605555) A ( 271) 248 57.5 5.4e-08
NP_003968 (OMIM: 102200,219090,600634,605555) AH r ( 330) 248 57.5 6.3e-08
NP_001128684 (OMIM: 607062) peptidyl-prolyl cis-tr ( 221) 236 55.1 2.2e-07
XP_016876582 (OMIM: 186947) PREDICTED: peptidyl-pr ( 196) 233 54.5 3e-07
XP_016876581 (OMIM: 186947) PREDICTED: peptidyl-pr ( 229) 233 54.5 3.4e-07
NP_001028226 (OMIM: 268000,604392,604393) aryl-hyd ( 321) 228 53.7 8.5e-07
NP_001028227 (OMIM: 268000,604392,604393) aryl-hyd ( 324) 228 53.7 8.6e-07
NP_001272331 (OMIM: 268000,604392,604393) aryl-hyd ( 345) 228 53.7 9e-07
NP_001272329 (OMIM: 268000,604392,604393) aryl-hyd ( 362) 228 53.8 9.4e-07
NP_001272328 (OMIM: 268000,604392,604393) aryl-hyd ( 372) 228 53.8 9.6e-07
NP_055151 (OMIM: 268000,604392,604393) aryl-hydroc ( 384) 228 53.8 9.8e-07
XP_011523402 (OMIM: 259450,607063,610968) PREDICTE ( 510) 228 53.9 1.2e-06
XP_011523401 (OMIM: 259450,607063,610968) PREDICTE ( 601) 228 53.9 1.4e-06
XP_011510364 (OMIM: 611397) PREDICTED: protein TAN (1554) 233 55.2 1.5e-06
XP_016860646 (OMIM: 611397) PREDICTED: protein TAN (1660) 233 55.2 1.6e-06
>>NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans iso (459 aa)
initn: 2992 init1: 2992 opt: 2992 Z-score: 3076.9 bits: 578.6 E(85289): 1.2e-164
Smith-Waterman score: 2992; 100.0% identity (100.0% similar) in 459 aa overlap (1-459:1-459)
10 20 30 40 50 60
pF1KB5 MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 AELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 EAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE
370 380 390 400 410 420
430 440 450
pF1KB5 EENKAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
:::::::::::::::::::::::::::::::::::::::
NP_002 EENKAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
430 440 450
>>XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-prolyl (414 aa)
initn: 2708 init1: 2708 opt: 2708 Z-score: 2786.1 bits: 524.6 E(85289): 1.9e-148
Smith-Waterman score: 2708; 100.0% identity (100.0% similar) in 414 aa overlap (46-459:1-414)
20 30 40 50 60 70
pF1KB5 APLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKD
::::::::::::::::::::::::::::::
XP_011 MPMIGDRVFVHYTGWLLDGTKFDSSLDRKD
10 20 30
80 90 100 110 120 130
pF1KB5 KFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELF
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 EFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEG
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 ENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKA
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 KESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQ
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 ALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARAD
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB5 FQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKAEASSGDHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKAEASSGDHP
340 350 360 370 380 390
440 450
pF1KB5 TDTEMKEEQKSNTAGSQSQVETEA
::::::::::::::::::::::::
XP_011 TDTEMKEEQKSNTAGSQSQVETEA
400 410
>>NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl cis (457 aa)
initn: 1729 init1: 1125 opt: 1730 Z-score: 1782.0 bits: 339.0 E(85289): 1.6e-92
Smith-Waterman score: 1730; 55.2% identity (80.6% similar) in 458 aa overlap (1-458:1-450)
10 20 30 40 50 60
pF1KB5 MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGW
::..: .. . .: . .: ::. :.:.::::..:: :.: : :::::.:.::: :
NP_001 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP
: .: ::::: ::.. : :.::::.:::::::..:::: ::.::. :::::::::::: :
NP_001 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD
::: :::: ::.::..:::::: :::::::: . .::::..::::: ::. :::
NP_001 KIPSNATLFFEIELLDFKGEDLF--EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGG
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 KLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN
..:: :.. : .::::. :.: :...:...:.. :. :.:: : :.:: .:: :: : ::
NP_001 RMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPN
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 AELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL
::: ::. :::::::::::::...:::::..::::.:::::: ::: ::..:: ::::::
NP_001 AELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRG
:.: ..:..:.. .... ::. ::::::.:::. .. :.: :.::: ::: :::::.:::
NP_001 EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRG
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 EAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE
::.: .:.:: :..::.:::.. :.::::. :...::.. ... :....:::::...::
NP_001 EAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAE
360 370 380 390 400 410
430 440 450
pF1KB5 EENKAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
.. : .:. . : . . : .: :..::. :
NP_001 QDAKEEANKAMGKKTS------EGVTNEKGTDSQAMEEEKPEGHV
420 430 440 450
>>NP_004108 (OMIM: 602623,608516) peptidyl-prolyl cis-tr (457 aa)
initn: 1729 init1: 1125 opt: 1730 Z-score: 1782.0 bits: 339.0 E(85289): 1.6e-92
Smith-Waterman score: 1730; 55.2% identity (80.6% similar) in 458 aa overlap (1-458:1-450)
10 20 30 40 50 60
pF1KB5 MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGW
::..: .. . .: . .: ::. :.:.::::..:: :.: : :::::.:.::: :
NP_004 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP
: .: ::::: ::.. : :.::::.:::::::..:::: ::.::. :::::::::::: :
NP_004 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD
::: :::: ::.::..:::::: :::::::: . .::::..::::: ::. :::
NP_004 KIPSNATLFFEIELLDFKGEDLF--EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGG
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 KLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN
..:: :.. : .::::. :.: :...:...:.. :. :.:: : :.:: .:: :: : ::
NP_004 RMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPN
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 AELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL
::: ::. :::::::::::::...:::::..::::.:::::: ::: ::..:: ::::::
NP_004 AELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRG
:.: ..:..:.. .... ::. ::::::.:::. .. :.: :.::: ::: :::::.:::
NP_004 EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRG
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 EAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE
::.: .:.:: :..::.:::.. :.::::. :...::.. ... :....:::::...::
NP_004 EAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAE
360 370 380 390 400 410
430 440 450
pF1KB5 EENKAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
.. : .:. . : . . : .: :..::. :
NP_004 QDAKEEANKAMGKKTS------EGVTNEKGTDSQAMEEEKPEGHV
420 430 440 450
>>NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl cis (457 aa)
initn: 1729 init1: 1125 opt: 1730 Z-score: 1782.0 bits: 339.0 E(85289): 1.6e-92
Smith-Waterman score: 1730; 55.2% identity (80.6% similar) in 458 aa overlap (1-458:1-450)
10 20 30 40 50 60
pF1KB5 MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGW
::..: .. . .: . .: ::. :.:.::::..:: :.: : :::::.:.::: :
NP_001 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP
: .: ::::: ::.. : :.::::.:::::::..:::: ::.::. :::::::::::: :
NP_001 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD
::: :::: ::.::..:::::: :::::::: . .::::..::::: ::. :::
NP_001 KIPSNATLFFEIELLDFKGEDLF--EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGG
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 KLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN
..:: :.. : .::::. :.: :...:...:.. :. :.:: : :.:: .:: :: : ::
NP_001 RMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPN
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 AELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL
::: ::. :::::::::::::...:::::..::::.:::::: ::: ::..:: ::::::
NP_001 AELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRG
:.: ..:..:.. .... ::. ::::::.:::. .. :.: :.::: ::: :::::.:::
NP_001 EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRG
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 EAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE
::.: .:.:: :..::.:::.. :.::::. :...::.. ... :....:::::...::
NP_001 EAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAE
360 370 380 390 400 410
430 440 450
pF1KB5 EENKAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
.. : .:. . : . . : .: :..::. :
NP_001 QDAKEEANKAMGKKTS------EGVTNEKGTDSQAMEEEKPEGHV
420 430 440 450
>>NP_001139249 (OMIM: 602623,608516) peptidyl-prolyl cis (268 aa)
initn: 905 init1: 618 opt: 897 Z-score: 930.5 bits: 180.7 E(85289): 4.3e-45
Smith-Waterman score: 897; 57.4% identity (79.8% similar) in 223 aa overlap (1-223:1-221)
10 20 30 40 50 60
pF1KB5 MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGW
::..: .. . .: . .: ::. :.:.::::..:: :.: : :::::.:.::: :
NP_001 MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP
: .: ::::: ::.. : :.::::.:::::::..:::: ::.::. :::::::::::: :
NP_001 LSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD
::: :::: ::.::..:::::: : ::::::: . .::::..::::: ::. :::
NP_001 KIPSNATLFFEIELLDFKGEDLFE--DGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGG
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 KLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN
..:: :.. : .::::. :.: :...:...:.. :. :.:: :
NP_001 RMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRPKNPGRWIPKKNWSRL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 AELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL
NP_001 PLSKRREPYTSRCVSPYAILSISKNLFKCW
240 250 260
>>NP_000792 (OMIM: 186945) peptidyl-prolyl cis-trans iso (108 aa)
initn: 338 init1: 338 opt: 338 Z-score: 362.4 bits: 74.2 E(85289): 1.9e-13
Smith-Waterman score: 338; 52.0% identity (75.5% similar) in 98 aa overlap (41-138:11-108)
20 30 40 50 60 70
pF1KB5 SGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSS
: : .: :. ::::: : :: :::::
NP_000 MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSS
10 20 30 40
80 90 100 110 120 130
pF1KB5 LDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVF
::. :.: ::: :::..:. ..: :.::. ..: .:.::::..: : :::.:::::
NP_000 RDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVF
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB5 EVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRF
.:::....
NP_000 DVELLKLE
>>NP_463460 (OMIM: 186945) peptidyl-prolyl cis-trans iso (108 aa)
initn: 338 init1: 338 opt: 338 Z-score: 362.4 bits: 74.2 E(85289): 1.9e-13
Smith-Waterman score: 338; 52.0% identity (75.5% similar) in 98 aa overlap (41-138:11-108)
20 30 40 50 60 70
pF1KB5 SGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSS
: : .: :. ::::: : :: :::::
NP_463 MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSS
10 20 30 40
80 90 100 110 120 130
pF1KB5 LDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVF
::. :.: ::: :::..:. ..: :.::. ..: .:.::::..: : :::.:::::
NP_463 RDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVF
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB5 EVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRF
.:::....
NP_463 DVELLKLE
>>NP_004107 (OMIM: 600620) peptidyl-prolyl cis-trans iso (108 aa)
initn: 322 init1: 322 opt: 322 Z-score: 346.0 bits: 71.2 E(85289): 1.6e-12
Smith-Waterman score: 322; 49.0% identity (73.5% similar) in 98 aa overlap (41-138:11-108)
20 30 40 50 60 70
pF1KB5 SGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSS
: : .: :. ::::: : .: :::::
NP_004 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSS
10 20 30 40
80 90 100 110 120 130
pF1KB5 LDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVF
::. :.: .:: ::::... . : :..:. ..:: :. :::..: : :::::::.:
NP_004 RDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIF
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB5 EVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRF
.:::....
NP_004 DVELLNLE
>>XP_011526165 (OMIM: 604840) PREDICTED: peptidyl-prolyl (413 aa)
initn: 391 init1: 165 opt: 313 Z-score: 328.7 bits: 69.9 E(85289): 1.4e-11
Smith-Waterman score: 313; 27.5% identity (60.7% similar) in 262 aa overlap (160-415:113-369)
130 140 150 160 170 180
pF1KB5 FEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD--KLFDQRE
: ..: .: .: : :. .. .. .. :
XP_011 EPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPE
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB5 LRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYEL
: : .:. :. .:. .. :. :: ..: .: .: :... :::.: : :.
XP_011 LVFTLGD---CDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEV
150 160 170 180 190
250 260 270 280 290 300
pF1KB5 HLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQY----KKIVSWLEYE
::. . . ....:.. .. .: :....... . : .: : :.: . .
XP_011 TLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVD
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB5 SSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAH
.: .:::: : :.. ::: .:::. . ::..::. .:: . .: :.:::.:..
XP_011 MTF-EEEAQLLQ-LKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVL
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB5 LAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEEN
... : .. .:.: :.::. ...:. .. : . : :: .:.
XP_011 AQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTETALYRKMLGNPSRLPA
320 330 340 350 360 370
430 440 450
pF1KB5 KAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
XP_011 KCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
380 390 400 410
459 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:42:52 2016 done: Thu Nov 3 15:42:53 2016
Total Scan time: 9.770 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]