(Circular) (Six-base) MAPSORT of: pFN21AA0343.seq Check: 6492 from: 1 to: 8245 pFN21AA0343 8245 bp With 182 enzymes: SgfI * January 16, 2009 15:22 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 3331 5104 3331 Size: 1773 6472 AatII G_ACGT'C Cuts at: 278 331 414 600 1536 4639 6055 278 Size: 53 83 186 936 3103 1416 2468 Fragments arranged by size: 3103 2468 1416 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 5588 1937 Size: 3651 4594 Acc65I G'GTAC_C Cuts at: 5566 5566 Size: 8245 AclI AA'CG_TT Cuts at: 1563 6372 6745 1563 Size: 4809 373 3063 Fragments arranged by size: 4809 3063 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 3713 4062 4271 5340 5508 6308 7692 7960 Size: 2081 349 209 1069 168 800 1384 268 Cuts at: 7960 1632 Size: 1917 Fragments arranged by size: 2081 1917 1384 1069 800 349 268 209 168 AfeI AGC'GCT Cuts at: 2036 3832 2036 Size: 1796 6449 AflII C'TTAA_G Cuts at: 820 1017 820 Size: 197 8048 AflIII A'CryG_T Cuts at: 1203 3518 3789 3791 7144 8121 1203 Size: 2315 271 2 3353 977 1327 Fragments arranged by size: 3353 2315 1327 977 271 2 AgeI A'CCGG_T Cuts at: 7076 7076 Size: 8245 AhdI GACnn_n'nnGTC Cuts at: 6974 6974 Size: 8245 AleI CACnn'nnGTG Cuts at: 1166 2440 2818 3794 4202 1166 Size: 1274 378 976 408 5209 Fragments arranged by size: 5209 1274 976 408 378 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 1184 Size: 8245 AlwNI CAG_nnn'CTG Cuts at: 2951 4226 4417 5988 7560 2951 Size: 1275 191 1571 1572 3636 Fragments arranged by size: 3636 1572 1571 1275 191 ApaI G_GGCC'C Cuts at: 4760 4760 Size: 8245 ApaLI G'TGCA_C Cuts at: 2088 4538 6302 7458 2088 Size: 2450 1764 1156 2875 Fragments arranged by size: 2875 2450 1764 1156 ApoI r'AATT_y Cuts at: 1493 3480 3983 4962 4996 5002 5533 5554 5780 Size: 1987 503 979 34 6 531 21 226 Cuts at: 5780 5932 8041 1493 Size: 152 2109 1697 Fragments arranged by size: 2109 1987 1697 979 531 503 226 152 34 21 6 AseI AT'TA_AT Cuts at: 160 1032 6799 160 Size: 872 5767 1606 Fragments arranged by size: 5767 1606 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 8245 AvaI C'yCGr_G Cuts at: 1870 1943 2184 4439 5570 1870 Size: 73 241 2255 1131 4545 Fragments arranged by size: 4545 2255 1131 241 73 BamHI G'GATC_C Cuts at: 4864 5575 5942 4864 Size: 711 367 7167 Fragments arranged by size: 7167 711 367 BanI G'GyrC_C Cuts at: 618 943 1160 1787 4029 4305 5509 5566 7021 Size: 325 217 627 2242 276 1204 57 1455 Cuts at: 7021 618 Size: 1842 Fragments arranged by size: 2242 1842 1455 1204 627 325 276 217 57 BanII G_rGCy'C Cuts at: 1391 4707 4760 5564 1391 Size: 3316 53 804 4072 Fragments arranged by size: 4072 3316 804 53 BbeI G_GCGC'C Cuts at: 4309 4309 Size: 8245 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 2130 2652 4479 4613 5325 928 Size: 971 231 522 1827 134 712 3848 Fragments arranged by size: 3848 1827 971 712 522 231 134 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 1987 2021 6436 6470 1903 Size: 34 50 34 4415 34 3678 Fragments arranged by size: 4415 3678 50 34 34 34 BciVI GTATCCnnnnn_n' Cuts at: 4366 6137 7347 4366 Size: 1771 1210 5264 Fragments arranged by size: 5264 1771 1210 BclI T'GATC_A Cuts at: 1548 3661 4401 1548 Size: 2113 740 5392 Fragments arranged by size: 5392 2113 740 BfrBI ATG'CAT Cuts at: 2981 2981 Size: 8245 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 6856 136 Size: 107 122 71 631 605 5184 1525 Fragments arranged by size: 5184 1525 631 605 122 107 71 BglII A'GATC_T Cuts at: 8240 8240 Size: 8245 BlpI GC'TnA_GC Cuts at: 3300 3839 5662 3300 Size: 539 1823 5883 Fragments arranged by size: 5883 1823 539 Bme1580I G_kGCm'C Cuts at: 1790 2058 2092 4542 4760 6306 7462 1790 Size: 268 34 2450 218 1546 1156 2573 Fragments arranged by size: 2573 2450 1546 1156 268 218 34 BmgBI CAC'GTC Cuts at: 1318 1318 Size: 8245 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 2866 3708 4223 Size: 416 53 83 399 24 1449 842 515 Cuts at: 4223 4544 4552 4797 5976 6934 442 Size: 321 8 245 1179 958 1753 Fragments arranged by size: 1753 1449 1179 958 842 515 416 399 321 245 83 53 24 8 BmtI G_CTAG'C Cuts at: 1056 1056 Size: 8245 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2604 4493 5458 2604 Size: 1889 965 5391 Fragments arranged by size: 5391 1889 965 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 2748 2837 3849 4488 4773 6905 1239 Size: 1509 89 1012 639 285 2132 2579 Fragments arranged by size: 2579 2132 1509 1012 639 285 89 Bpu10I CC'TnA_GC Cuts at: 4528 4528 Size: 8245 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 2574 6370 7235 7533 2574 Size: 3796 865 298 3286 Fragments arranged by size: 3796 3286 865 298 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 2342 3393 6908 882 Size: 617 843 1051 3515 2219 Fragments arranged by size: 3515 2219 1051 843 617 BsaAI yAC'GTr Cuts at: 493 1204 3519 3792 4090 4245 6036 493 Size: 711 2315 273 298 155 1791 2702 Fragments arranged by size: 2702 2315 1791 711 298 273 155 BsaBI GATnn'nnATC Cuts at: 8239 8239 Size: 8245 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 4151 4306 4636 6052 Size: 53 83 186 936 2618 155 330 1416 Cuts at: 6052 6434 7069 275 Size: 382 635 1451 Fragments arranged by size: 2618 1451 1416 936 635 382 330 186 155 83 53 BsaWI w'CCGG_w Cuts at: 6678 7076 7350 7497 7908 6678 Size: 398 274 147 411 7015 Fragments arranged by size: 7015 411 398 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 2385 2415 3806 3836 3847 Size: 30 165 30 982 30 1391 30 11 Cuts at: 3847 3853 3877 3883 5400 5430 1178 Size: 6 24 6 1517 30 3993 Fragments arranged by size: 3993 1517 1391 982 165 30 30 30 30 30 24 11 6 6 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 3381 1186 Size: 2195 6050 BseYI C'CCAG_C Cuts at: 3170 4068 4142 4759 7448 7944 3170 Size: 898 74 617 2689 496 3471 Fragments arranged by size: 3471 2689 898 617 496 74 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 3249 1163 Size: 573 1513 6159 Fragments arranged by size: 6159 1513 573 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 5695 6456 7484 1540 Size: 275 186 3694 761 1028 2301 Fragments arranged by size: 3694 2301 1028 761 275 186 BsiHKAI G_wGCw'C Cuts at: 2092 3436 4542 4810 6306 6391 7462 2092 Size: 1344 1106 268 1496 85 1071 2875 Fragments arranged by size: 2875 1496 1344 1106 1071 268 85 BsmI GAATG_Cn' Cuts at: 2880 3650 5756 5849 2880 Size: 770 2106 93 5276 Fragments arranged by size: 5276 2106 770 93 BsmBI CGTCTCn'nnnn_ Cuts at: 3826 3826 Size: 8245 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2058 2092 3436 4542 4707 4760 4810 Size: 399 268 34 1344 1106 165 53 50 Cuts at: 4810 5564 6306 6391 7462 1391 Size: 754 742 85 1071 2174 Fragments arranged by size: 2174 1344 1106 1071 754 742 399 268 165 85 53 50 34 BspEI T'CCGG_A Cuts at: 7908 7908 Size: 8245 BspHI T'CATG_A Cuts at: 2328 3439 6134 7864 2328 Size: 1111 2695 1730 2709 Fragments arranged by size: 2709 2695 1730 1111 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 3331 5104 5600 844 Size: 2487 1773 496 3489 Fragments arranged by size: 3489 2487 1773 496 BsrBI CCG'CTC Cuts at: 1394 1823 6132 1394 Size: 429 4309 3507 Fragments arranged by size: 4309 3507 429 BsrDI GCAATG_nn' Cuts at: 65 1248 2779 2823 3250 3345 4014 6740 6914 Size: 1183 1531 44 427 95 669 2726 174 Cuts at: 6914 65 Size: 1396 Fragments arranged by size: 2726 1531 1396 1183 669 427 174 95 44 BsrFI r'CCGG_y Cuts at: 1700 1810 5109 5482 6889 7076 1700 Size: 110 3299 373 1407 187 2869 Fragments arranged by size: 3299 2869 1407 373 187 110 BsrGI T'GTAC_A Cuts at: 96 2372 96 Size: 2276 5969 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 8245 BssSI C'ACGA_G Cuts at: 6305 7317 6305 Size: 1012 7233 BstAPI GCAn_nnn'nTGC Cuts at: 794 2978 794 Size: 2184 6061 BstBI TT'CG_AA Cuts at: 4266 7049 4266 Size: 2783 5462 BstEII G'GTnAC_C Cuts at: 1184 2287 1184 Size: 1103 7142 BstXI CCAn_nnnn'nTGG Cuts at: 4026 4204 4316 4883 4026 Size: 178 112 567 7388 Fragments arranged by size: 7388 567 178 112 BstYI r'GATC_y Cuts at: 1972 4653 4864 5575 5942 6327 6344 7796 7882 Size: 2681 211 711 367 385 17 1452 86 Cuts at: 7882 7894 8240 1972 Size: 12 346 1977 Fragments arranged by size: 2681 1977 1452 711 385 367 346 211 86 17 12 BtgI C'CryG_G Cuts at: 513 1065 513 Size: 552 7693 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 3972 5114 487 Size: 683 56 2746 1142 3618 Fragments arranged by size: 3618 2746 1142 683 56 BtsI GCAGTG_nn' Cuts at: 4122 5761 6555 6575 4122 Size: 1639 794 20 5792 Fragments arranged by size: 5792 1639 794 20 ClaI AT'CG_AT Cuts at: 1554 2271 1554 Size: 717 7528 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 529 Size: 35 8210 DraI TTT'AAA Cuts at: 3415 4992 5001 5549 3415 Size: 1577 9 548 6111 Fragments arranged by size: 6111 1577 548 9 DraIII CAC_nnn'GTG Cuts at: 2576 2576 Size: 8245 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 2285 7252 809 Size: 507 969 4967 1802 Fragments arranged by size: 4967 1802 969 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 3798 5422 5692 Size: 54 1425 50 275 18 1968 1624 270 Cuts at: 5692 6581 8210 8 Size: 889 1629 43 Fragments arranged by size: 1968 1629 1624 1425 889 275 270 54 50 43 18 EagI C'GGCC_G Cuts at: 1537 1812 5692 1537 Size: 275 3880 4090 Fragments arranged by size: 4090 3880 275 EarI CTCTTCn'nnn_ Cuts at: 1353 2072 3441 4127 6175 1353 Size: 719 1369 686 2048 3423 Fragments arranged by size: 3423 2048 1369 719 686 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 2411 3814 6832 7206 7352 387 Size: 1064 138 822 1403 3018 374 146 1280 Fragments arranged by size: 3018 1403 1280 1064 822 374 146 138 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 2748 2837 3713 3849 4062 4271 4488 Size: 393 1116 89 876 136 213 209 217 Cuts at: 4488 4773 5340 5508 6308 6905 7692 7960 1239 Size: 285 567 168 800 597 787 268 1524 Fragments arranged by size: 1524 1116 876 800 787 597 567 393 285 268 217 213 209 168 136 89 EcoNI CCTnn'n_nnAGG Cuts at: 2304 2630 2304 Size: 326 7919 EcoO109I rG'GnC_Cy Cuts at: 2605 3081 3783 4414 4546 4756 4943 2605 Size: 476 702 631 132 210 187 5907 Fragments arranged by size: 5907 702 631 476 210 187 132 EcoRI G'AATT_C Cuts at: 5533 5554 5932 5533 Size: 21 378 7846 Fragments arranged by size: 7846 378 21 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 2053 2120 2474 2053 Size: 67 354 7824 Fragments arranged by size: 7824 354 67 FspI TGC'GCA Cuts at: 6751 6751 Size: 8245 HaeII r_GCGC'y Cuts at: 1678 2038 3834 4309 7392 1678 Size: 360 1796 475 3083 2531 Fragments arranged by size: 3083 2531 1796 475 360 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 3806 3838 4816 4848 6886 Size: 32 135 32 2234 32 978 32 2038 Cuts at: 6886 6918 6960 6992 1373 Size: 32 42 32 2626 Fragments arranged by size: 2626 2234 2038 978 135 42 32 32 32 32 32 32 HincII GTy'rAC Cuts at: 669 1657 1938 3132 3736 5401 5524 5589 5835 Size: 988 281 1194 604 1665 123 65 246 Cuts at: 5835 669 Size: 3079 Fragments arranged by size: 3079 1665 1194 988 604 281 246 123 65 HindIII A'AGCT_T Cuts at: 748 2233 748 Size: 1485 6760 HpaI GTT'AAC Cuts at: 3132 5835 3132 Size: 2703 5542 KasI G'GCGC_C Cuts at: 4305 4305 Size: 8245 KpnI G_GTAC'C Cuts at: 5570 5570 Size: 8245 MfeI C'AATT_G Cuts at: 2514 5844 2514 Size: 3330 4915 MluI A'CGCG_T Cuts at: 8121 8121 Size: 8245 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 2165 3884 4859 7359 7543 1305 Size: 860 1719 975 2500 184 2007 Fragments arranged by size: 2500 2007 1719 975 860 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 3800 5424 10 Size: 54 1425 343 1968 1624 2831 Fragments arranged by size: 2831 1968 1624 1425 343 54 MslI CAynn'nnrTG Cuts at: 518 1166 2440 2818 3465 3794 4202 4881 6203 Size: 648 1274 378 647 329 408 679 1322 Cuts at: 6203 6562 6721 518 Size: 359 159 2042 Fragments arranged by size: 2042 1322 1274 679 648 647 408 378 359 329 159 MspA1I CmG'CkG Cuts at: 1606 3780 3940 4072 4202 4448 5661 6338 7486 Size: 2174 160 132 130 246 1213 677 1148 Cuts at: 7486 7731 1606 Size: 245 2120 Fragments arranged by size: 2174 2120 1213 1148 677 246 245 160 132 130 NaeI GCC'GGC Cuts at: 5111 5484 5111 Size: 373 7872 NarI GG'CG_CC Cuts at: 4306 4306 Size: 8245 NcoI C'CATG_G Cuts at: 513 1065 513 Size: 552 7693 NdeI CA'TA_TG Cuts at: 387 387 Size: 8245 NgoMIV G'CCGG_C Cuts at: 5109 5482 5109 Size: 373 7872 NheI G'CTAG_C Cuts at: 1052 1052 Size: 8245 NotI GC'GGCC_GC Cuts at: 5692 5692 Size: 8245 NsiI A_TGCA'T Cuts at: 2983 2983 Size: 8245 NspI r_CATG'y Cuts at: 1132 1229 4690 5603 7148 1132 Size: 97 3461 913 1545 2229 Fragments arranged by size: 3461 2229 1545 913 97 PasI CC'CwG_GG Cuts at: 1348 1348 Size: 8245 PciI A'CATG_T Cuts at: 7144 7144 Size: 8245 PflMI CCAn_nnn'nTGG Cuts at: 1108 3408 1108 Size: 2300 5945 PfoI T'CCnGG_A Cuts at: 2240 2240 Size: 8245 PmeI GTTT'AAAC Cuts at: 5549 5549 Size: 8245 PmlI CAC'GTG Cuts at: 3792 3792 Size: 8245 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 6314 6346 7827 7859 6314 Size: 32 1481 32 6700 Fragments arranged by size: 6700 1481 32 32 PpuMI rG'GwC_Cy Cuts at: 2605 3081 3783 4546 2605 Size: 476 702 763 6304 Fragments arranged by size: 6304 763 702 476 PshAI GACnn'nnGTC Cuts at: 1613 1613 Size: 8245 PsiI TTA'TAA Cuts at: 2901 5815 2901 Size: 2914 5331 PspOMI G'GGCC_C Cuts at: 4756 4756 Size: 8245 PstI C_TGCA'G Cuts at: 830 2401 2507 3095 5597 830 Size: 1571 106 588 2502 3478 Fragments arranged by size: 3478 2502 1571 588 106 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 8245 PvuII CAG'CTG Cuts at: 3940 4072 4202 4448 3940 Size: 132 130 246 7737 Fragments arranged by size: 7737 246 132 130 SalI G'TCGA_C Cuts at: 1936 5587 1936 Size: 3651 4594 SanDI GG'GwC_CC Cuts at: 4546 4546 Size: 8245 SapI GCTCTTCn'nnn_ Cuts at: 3441 4127 3441 Size: 686 7559 SbfI CC_TGCA'GG Cuts at: 5597 5597 Size: 8245 ScaI AGT'ACT Cuts at: 2496 6493 8205 2496 Size: 3997 1712 2536 Fragments arranged by size: 3997 2536 1712 SexAI A'CCwGG_T Cuts at: 3339 3339 Size: 8245 SfcI C'TryA_G Cuts at: 826 1045 2397 2503 3091 4449 5593 6728 7409 Size: 219 1352 106 588 1358 1144 1135 681 Cuts at: 7409 7600 826 Size: 191 1471 Fragments arranged by size: 1471 1358 1352 1144 1135 681 588 219 191 106 SfoI GGC'GCC Cuts at: 4307 4307 Size: 8245 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 8245 SgrAI Cr'CCGG_yG Cuts at: 1700 1700 Size: 8245 SmaI CCC'GGG Cuts at: 1872 5572 1872 Size: 3700 4545 SmlI C'TyrA_G Cuts at: 820 1017 1943 2589 6349 7250 7512 820 Size: 197 926 646 3760 901 262 1553 Fragments arranged by size: 3760 1553 926 901 646 262 197 SnaBI TAC'GTA Cuts at: 493 6036 493 Size: 5543 2702 SpeI A'CTAG_T Cuts at: 152 152 Size: 8245 SphI G_CATG'C Cuts at: 1132 5603 1132 Size: 4471 3774 SspI AAT'ATT Cuts at: 5 52 2194 2538 6169 5 Size: 47 2142 344 3631 2081 Fragments arranged by size: 3631 2142 2081 344 47 StuI AGG'CCT Cuts at: 1517 3358 4284 1517 Size: 1841 926 5478 Fragments arranged by size: 5478 1841 926 StyI C'CwwG_G Cuts at: 513 1065 4666 5684 513 Size: 552 3601 1018 3074 Fragments arranged by size: 3601 3074 1018 552 SwaI ATTT'AAAT Cuts at: 5001 5001 Size: 8245 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 2165 6272 6289 6442 6627 7072 325 Size: 1255 585 4107 17 153 185 445 1498 Fragments arranged by size: 4107 1498 1255 585 445 185 153 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 2372 2494 3503 Size: 274 80 33 51 1443 395 122 1009 Cuts at: 3503 4290 4899 6491 8203 96 Size: 787 609 1592 1712 138 Fragments arranged by size: 1712 1592 1443 1009 787 609 395 274 138 122 80 51 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 3297 3329 3656 3688 4489 4521 4713 4745 8205 Size: 32 327 32 801 32 192 32 3460 Cuts at: 8205 8237 3297 Size: 32 3305 Fragments arranged by size: 3460 3305 801 327 192 32 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 1316 3818 4775 1316 Size: 2502 957 4786 Fragments arranged by size: 4786 2502 957 XbaI T'CTAG_A Cuts at: 5581 5581 Size: 8245 XcmI CCAnnnn_n'nnnnTGG Cuts at: 2238 2853 3405 3808 2238 Size: 615 552 403 6675 Fragments arranged by size: 6675 615 552 403 XhoI C'TCGA_G Cuts at: 1943 1943 Size: 8245 XmaI C'CCGG_G Cuts at: 1870 5570 1870 Size: 3700 4545 XmnI GAAnn'nnTTC Cuts at: 4262 5353 6374 4262 Size: 1091 1021 6133 Fragments arranged by size: 6133 1091 1021 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 4637 6053 276 Size: 53 83 186 936 3103 1416 2468 Fragments arranged by size: 3103 2468 1416 936 186 83 53 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AfeI AflII AflIII AgeI AhdI AleI AlfI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BcgI BciVI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI BtgI BtgZI BtsI ClaI CspCI DraI DraIII DrdI EaeI EagI EarI EciI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NotI NsiI NspI PasI PciI PflMI PfoI PmeI PmlI PpiI PpuMI PshAI PsiI PspOMI PstI PvuI PvuII SalI SanDI SapI SbfI ScaI SexAI SfcI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SspI StuI StyI SwaI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AloI AscI AvrII BaeI BbvCI BsiWI BstZ17I Bsu36I EcoICRI EcoRV FseI FspAI NruI PacI PspXI PsrI RsrII SacI SacII SfiI SrfI