Result of FASTA (ccds) for
pFN21AB0020
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0020, 1783 aa
1>>>pF1KB0020 1783 - 1783 aa - 1783 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.3317+/-0.00107; mu= 7.6645+/- 0.065
mean_var=252.7492+/-49.304, 0's: 0 Z-trim(111.5): 43 B-trim: 11 in 1/52
Lambda= 0.080673
statistics sampled from 12369 (12405) to 12369 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.381), width: 16
Scan time: 7.560
The best scores are: opt bits E(32554)
CCDS5229.1 AKAP12 gene_id:9590|Hs108|chr6 (1782) 11297 1329.6 0
CCDS5230.1 AKAP12 gene_id:9590|Hs108|chr6 (1684) 10617 1250.5 0
>>CCDS5229.1 AKAP12 gene_id:9590|Hs108|chr6 (1782 aa)
initn: 9753 init1: 9753 opt: 11297 Z-score: 7114.6 bits: 1329.6 E(32554): 0
Smith-Waterman score: 11297; 99.7% identity (99.9% similar) in 1783 aa overlap (1-1783:1-1782)
10 20 30 40 50 60
pF1KB0 MGAGSSTEQRSPEQPPEGSSTPAEPEPSGGGPSAEAAPDTTADPAIAASDPATKLLQKNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 MGAGSSTEQRSPEQPPEGSSTPAEPEPSGGGPSAEAAPDTTADPAIAASDPATKLLQKNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 QLSTINGVAEQDELSLQEGDLNGQKGALNGQGALNSQEEEEVIVTEVGQRDSEDVSERDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
CCDS52 QLSTINGVAEQDELSLQEGDLNGQKGALNGQGALNSQEEEEVIVTEVGQRDSEDVSKRDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 DKEMATKSAVVHDITDDGQEETPEIIEQIPSSESNLEELTQPTESQANDIGFKKVFKFVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 DKEMATKSAVVHDITDDGQEETPEIIEQIPSSESNLEELTQPTESQANDIGFKKVFKFVG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 FKFTVKKDKTEKPDTVQLLTVKKDEGEGAAGAGDHQDPSLGAGEAASKESEPKQSTEKPE
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
CCDS52 FKFTVKKDKTEKPDTVQLLTVKKDEGEGAAGAGDHKDPSLGAGEAASKESEPKQSTEKPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 ETLKREQSHAEISPPAESGQAVEECKEEGEEKQEKEPSKSAESPTSPVTSETGSTFKKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 ETLKREQSHAEISPPAESGQAVEECKEEGEEKQEKEPSKSAESPTSPVTSETGSTFKKFF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 TQGWAGWRKKTSFRKPKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 TQGWAGWRKKTSFRKPKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 PAESAHEPRLSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEKIEVHQEEVVAEVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 PAESAHEPRLSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEKIEVHQEEVVAEVH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 VSIVEERTEEQKTEVEETAGSVPAEELVEMDAEPQEAEPAKELVKLKETCVSGEDPTQGA
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 VSTVEERTEEQKTEVEETAGSVPAEELVEMDAEPQEAEPAKELVKLKETCVSGEDPTQGA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 DLSPDEKVLSKPPEGVVSEVEMLSSQERMKVQGSPLKKLFTSTGLKKLSGKKQKGKRGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 DLSPDEKVLSKPPEGVVSEVEMLSSQERMKVQGSPLKKLFTSTGLKKLSGKKQKGKRGGG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 DEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGATSDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 DEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGATSDG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 EKKREGVTPWASFKKMVTPKKRVRRPSESDKEDELDKVKSATLSSTESTASEMQEEMKGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 EKKREGVTPWASFKKMVTPKKRVRRPSESDKEDELDKVKSATLSSTESTASEMQEEMKGS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 VEEPKPEEPKRKVDTSVSWEALICVGSSKKRARRGSSSDEEGGPKAMGGDHQKADEAGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 VEEPKPEEPKRKVDTSVSWEALICVGSSKKRARRGSSSDEEGGPKAMGGDHQKADEAGKD
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 KETGTDGILAGSQEHDPGQGSSSPEQAGSPTEGEGVSTWESFKRLVTPRKKSKSKLEEKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 KETGTDGILAGSQEHDPGQGSSSPEQAGSPTEGEGVSTWESFKRLVTPRKKSKSKLEEKS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 EDSIAGSGVEHSTPDTEPGKEESWVSIKKFIPGRRKKRPDGKQEQAPVEDAGPTGANEDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 EDSIAGSGVEHSTPDTEPGKEESWVSIKKFIPGRRKKRPDGKQEQAPVEDAGPTGANEDD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 SDVPAVVPLSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 SDVPAVVPLSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGT
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 RAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 RAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 RGDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 RGDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEAT
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB0 PVQEVEGGVPDIEEQERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 PVQEVEGGVPDIEEQERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQ
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB0 AEASGLKKETDVVLKVDAQEAKTEPFTQGKVVGQTTPESFEKAPQVTESIESSELVTTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 AEASGLKKETDVVLKVDAQEAKTEPFTQGKVVGQTTPESFEKAPQVTESIESSELVTTCQ
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB0 AETLAGVKSQEMVMEQAIPPDSVETPTDSETDGSTPVADFDAPGTTQKDEIVEIHEENEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 AETLAGVKSQEMVMEQAIPPDSVETPTDSETDGSTPVADFDAPGTTQKDEIVEIHEENEV
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB0 ASGTQSGGTEAEAVPAQKERPPAPSSFVFQEETKEQSKMEDTLEHTDKEVSVETVSILSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 ASGTQSGGTEAEAVPAQKERPPAPSSFVFQEETKEQSKMEDTLEHTDKEVSVETVSILSK
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB0 TEGTQEADQYADEKTKDVPFFEGLEGSIDTGITVSREKVTEVALKGEGTEEAECKKDDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 TEGTQEADQYADEKTKDVPFFEGLEGSIDTGITVSREKVTEVALKGEGTEEAECKKDDAL
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KB0 ELQSHAKSPPSPVEREMVVQVEREKTEAEPTHVNEEKLEHETAVTVSEEVSKQLLQTVNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 ELQSHAKSPPSPVEREMVVQVEREKTEAEPTHVNEEKLEHETAVTVSEEVSKQLLQTVNV
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KB0 PIIDGAKEVSSLEGSPPPCLGQEEAVCTKIQVQSSEASFTLTAAAEEEKVLGETANILET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 PIIDGAKEVSSLEGSPPPCLGQEEAVCTKIQVQSSEASFTLTAAAEEEKVLGETANILET
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KB0 GETLEPAGAHLVLEEKSSEKNEDFAAHPGEDAVPTGPDCQAKSTPVIVSATTKKGLSSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 GETLEPAGAHLVLEEKSSEKNEDFAAHPGEDAVPTGPDCQAKSTPVIVSATTKKGLSSDL
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KB0 EGEKTTSLKWKSDEVDEQVACQEVKVSVAIEEDLEPENGILELETKSSKLVQNIIQTAVD
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS52 EGEKTTSLKWKSDEVDEQVACQEVKVSVAIE-DLEPENGILELETKSSKLVQNIIQTAVD
1510 1520 1530 1540 1550
1570 1580 1590 1600 1610 1620
pF1KB0 QFVRTEETATEMLTSELQTQAHVIKADSQDAGQETEKEGEDPQASAQDETPITSAKEESE
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS52 QFVRTEETATEMLTSELQTQAHVIKADSQDAGQETEKEGEEPQASAQDETPITSAKEESE
1560 1570 1580 1590 1600 1610
1630 1640 1650 1660 1670 1680
pF1KB0 STAVGQAHSDISKDMSEASEKTMTVEVEGSTVNDQQLEEVVLPSEEEGGGAGTKSVPEDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 STAVGQAHSDISKDMSEASEKTMTVEVEGSTVNDQQLEEVVLPSEEEGGGAGTKSVPEDD
1620 1630 1640 1650 1660 1670
1690 1700 1710 1720 1730 1740
pF1KB0 GHALLAERIEKSLVEPKEDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPKQKEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 GHALLAERIEKSLVEPKEDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPKQKEKE
1680 1690 1700 1710 1720 1730
1750 1760 1770 1780
pF1KB0 DAQEVELQEGKVHSESDKAITPQAQEELQKQERESAKSELTES
:::::::::::::::::::::::::::::::::::::::::::
CCDS52 DAQEVELQEGKVHSESDKAITPQAQEELQKQERESAKSELTES
1740 1750 1760 1770 1780
>>CCDS5230.1 AKAP12 gene_id:9590|Hs108|chr6 (1684 aa)
initn: 9073 init1: 9073 opt: 10617 Z-score: 6687.3 bits: 1250.5 E(32554): 0
Smith-Waterman score: 10617; 99.5% identity (99.8% similar) in 1681 aa overlap (103-1783:5-1684)
80 90 100 110 120 130
pF1KB0 ELSLQEGDLNGQKGALNGQGALNSQEEEEVIVTEVGQRDSEDVSERDSDKEMATKSAVVH
:. ::::::::::.:::::::::::::::
CCDS52 MLGTITITVGQRDSEDVSKRDSDKEMATKSAVVH
10 20 30
140 150 160 170 180 190
pF1KB0 DITDDGQEETPEIIEQIPSSESNLEELTQPTESQANDIGFKKVFKFVGFKFTVKKDKTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 DITDDGQEETPEIIEQIPSSESNLEELTQPTESQANDIGFKKVFKFVGFKFTVKKDKTEK
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB0 PDTVQLLTVKKDEGEGAAGAGDHQDPSLGAGEAASKESEPKQSTEKPEETLKREQSHAEI
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
CCDS52 PDTVQLLTVKKDEGEGAAGAGDHKDPSLGAGEAASKESEPKQSTEKPEETLKREQSHAEI
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB0 SPPAESGQAVEECKEEGEEKQEKEPSKSAESPTSPVTSETGSTFKKFFTQGWAGWRKKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 SPPAESGQAVEECKEEGEEKQEKEPSKSAESPTSPVTSETGSTFKKFFTQGWAGWRKKTS
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB0 FRKPKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQEPAESAHEPRLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 FRKPKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQEPAESAHEPRLSA
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB0 EYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEKIEVHQEEVVAEVHVSIVEERTEEQK
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
CCDS52 EYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEKIEVHQEEVVAEVHVSTVEERTEEQK
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB0 TEVEETAGSVPAEELVEMDAEPQEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLSKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 TEVEETAGSVPAEELVEMDAEPQEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLSKP
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB0 PEGVVSEVEMLSSQERMKVQGSPLKKLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 PEGVVSEVEMLSSQERMKVQGSPLKKLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPA
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB0 DSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGATSDGEKKREGVTPWAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 DSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGATSDGEKKREGVTPWAS
460 470 480 490 500 510
620 630 640 650 660 670
pF1KB0 FKKMVTPKKRVRRPSESDKEDELDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 FKKMVTPKKRVRRPSESDKEDELDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRK
520 530 540 550 560 570
680 690 700 710 720 730
pF1KB0 VDTSVSWEALICVGSSKKRARRGSSSDEEGGPKAMGGDHQKADEAGKDKETGTDGILAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 VDTSVSWEALICVGSSKKRARRGSSSDEEGGPKAMGGDHQKADEAGKDKETGTDGILAGS
580 590 600 610 620 630
740 750 760 770 780 790
pF1KB0 QEHDPGQGSSSPEQAGSPTEGEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 QEHDPGQGSSSPEQAGSPTEGEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHS
640 650 660 670 680 690
800 810 820 830 840 850
pF1KB0 TPDTEPGKEESWVSIKKFIPGRRKKRPDGKQEQAPVEDAGPTGANEDDSDVPAVVPLSEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 TPDTEPGKEESWVSIKKFIPGRRKKRPDGKQEQAPVEDAGPTGANEDDSDVPAVVPLSEY
700 710 720 730 740 750
860 870 880 890 900 910
pF1KB0 DAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 DAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPS
760 770 780 790 800 810
920 930 940 950 960 970
pF1KB0 WISASVTEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 WISASVTEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAELT
820 830 840 850 860 870
980 990 1000 1010 1020 1030
pF1KB0 PEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 PEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDI
880 890 900 910 920 930
1040 1050 1060 1070 1080 1090
pF1KB0 EEQERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASGLKKETDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 EEQERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASGLKKETDV
940 950 960 970 980 990
1100 1110 1120 1130 1140 1150
pF1KB0 VLKVDAQEAKTEPFTQGKVVGQTTPESFEKAPQVTESIESSELVTTCQAETLAGVKSQEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 VLKVDAQEAKTEPFTQGKVVGQTTPESFEKAPQVTESIESSELVTTCQAETLAGVKSQEM
1000 1010 1020 1030 1040 1050
1160 1170 1180 1190 1200 1210
pF1KB0 VMEQAIPPDSVETPTDSETDGSTPVADFDAPGTTQKDEIVEIHEENEVASGTQSGGTEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 VMEQAIPPDSVETPTDSETDGSTPVADFDAPGTTQKDEIVEIHEENEVASGTQSGGTEAE
1060 1070 1080 1090 1100 1110
1220 1230 1240 1250 1260 1270
pF1KB0 AVPAQKERPPAPSSFVFQEETKEQSKMEDTLEHTDKEVSVETVSILSKTEGTQEADQYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 AVPAQKERPPAPSSFVFQEETKEQSKMEDTLEHTDKEVSVETVSILSKTEGTQEADQYAD
1120 1130 1140 1150 1160 1170
1280 1290 1300 1310 1320 1330
pF1KB0 EKTKDVPFFEGLEGSIDTGITVSREKVTEVALKGEGTEEAECKKDDALELQSHAKSPPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 EKTKDVPFFEGLEGSIDTGITVSREKVTEVALKGEGTEEAECKKDDALELQSHAKSPPSP
1180 1190 1200 1210 1220 1230
1340 1350 1360 1370 1380 1390
pF1KB0 VEREMVVQVEREKTEAEPTHVNEEKLEHETAVTVSEEVSKQLLQTVNVPIIDGAKEVSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 VEREMVVQVEREKTEAEPTHVNEEKLEHETAVTVSEEVSKQLLQTVNVPIIDGAKEVSSL
1240 1250 1260 1270 1280 1290
1400 1410 1420 1430 1440 1450
pF1KB0 EGSPPPCLGQEEAVCTKIQVQSSEASFTLTAAAEEEKVLGETANILETGETLEPAGAHLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 EGSPPPCLGQEEAVCTKIQVQSSEASFTLTAAAEEEKVLGETANILETGETLEPAGAHLV
1300 1310 1320 1330 1340 1350
1460 1470 1480 1490 1500 1510
pF1KB0 LEEKSSEKNEDFAAHPGEDAVPTGPDCQAKSTPVIVSATTKKGLSSDLEGEKTTSLKWKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 LEEKSSEKNEDFAAHPGEDAVPTGPDCQAKSTPVIVSATTKKGLSSDLEGEKTTSLKWKS
1360 1370 1380 1390 1400 1410
1520 1530 1540 1550 1560 1570
pF1KB0 DEVDEQVACQEVKVSVAIEEDLEPENGILELETKSSKLVQNIIQTAVDQFVRTEETATEM
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS52 DEVDEQVACQEVKVSVAIE-DLEPENGILELETKSSKLVQNIIQTAVDQFVRTEETATEM
1420 1430 1440 1450 1460 1470
1580 1590 1600 1610 1620 1630
pF1KB0 LTSELQTQAHVIKADSQDAGQETEKEGEDPQASAQDETPITSAKEESESTAVGQAHSDIS
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS52 LTSELQTQAHVIKADSQDAGQETEKEGEEPQASAQDETPITSAKEESESTAVGQAHSDIS
1480 1490 1500 1510 1520 1530
1640 1650 1660 1670 1680 1690
pF1KB0 KDMSEASEKTMTVEVEGSTVNDQQLEEVVLPSEEEGGGAGTKSVPEDDGHALLAERIEKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 KDMSEASEKTMTVEVEGSTVNDQQLEEVVLPSEEEGGGAGTKSVPEDDGHALLAERIEKS
1540 1550 1560 1570 1580 1590
1700 1710 1720 1730 1740 1750
pF1KB0 LVEPKEDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPKQKEKEDAQEVELQEGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 LVEPKEDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPKQKEKEDAQEVELQEGKV
1600 1610 1620 1630 1640 1650
1760 1770 1780
pF1KB0 HSESDKAITPQAQEELQKQERESAKSELTES
:::::::::::::::::::::::::::::::
CCDS52 HSESDKAITPQAQEELQKQERESAKSELTES
1660 1670 1680
1783 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 22:32:36 2016 done: Wed Nov 2 22:32:37 2016
Total Scan time: 7.560 Total Display time: 0.310
Function used was FASTA [36.3.4 Apr, 2011]