Result of FASTA (ccds) for
pFN21AA0541
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0541, 1490 aa
1>>>pF1KA0541 1490 - 1490 aa - 1490 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3195+/-0.000998; mu= 13.6114+/- 0.060
mean_var=116.9173+/-24.409, 0's: 0 Z-trim(107.4): 51 B-trim: 83 in 1/50
Lambda= 0.118614
statistics sampled from 9544 (9583) to 9544 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.294), width: 16
Scan time: 3.150
The best scores are: opt bits E(32554)
CCDS11962.1 WDR7 gene_id:23335|Hs108|chr18 (1490) 9959 1716.4 0
CCDS11963.1 WDR7 gene_id:23335|Hs108|chr18 (1457) 6376 1103.3 0
CCDS10151.1 WDR72 gene_id:256764|Hs108|chr15 (1102) 2063 365.2 6.3e-100
>>CCDS11962.1 WDR7 gene_id:23335|Hs108|chr18 (1490 aa)
initn: 9959 init1: 9959 opt: 9959 Z-score: 9207.8 bits: 1716.4 E(32554): 0
Smith-Waterman score: 9959; 100.0% identity (100.0% similar) in 1490 aa overlap (1-1490:1-1490)
10 20 30 40 50 60
pF1KA0 MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELQINPRALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELQINPRALL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVSDGRCIEFTKLACTHTGIQFYQFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVSDGRCIEFTKLACTHTGIQFYQFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 SVTGILKVWIVTSEISDMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SVTGILKVWIVTSEISDMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 FDAGDYSLLCSGPSENGQTWTGGDFVSSDKVIIWTENGQSYIYKLPASCLPASDSFRSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FDAGDYSLLCSGPSENGQTWTGGDFVSSDKVIIWTENGQSYIYKLPASCLPASDSFRSDV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GKAVENLIPPVQHILLDRKDKELLICPPVTRFFYGCREYFHKLLIQGDSSGRLNIWNISD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GKAVENLIPPVQHILLDRKDKELLICPPVTRFFYGCREYFHKLLIQGDSSGRLNIWNISD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 TADKQGSEEGLAMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TADKQGSEEGLAMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 GGHMSLMLPGYNQPACKLSHGKTEVGRKLPASEGVGKGTYGVSRAVTTQHLLSIISLANT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GGHMSLMLPGYNQPACKLSHGKTEVGRKLPASEGVGKGTYGVSRAVTTQHLLSIISLANT
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 LMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSD
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 ADHSGSDPPSAPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ADHSGSDPPSAPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRC
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 LEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYIDHVISPGVTSEAAQTITTAPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYIDHVISPGVTSEAAQTITTAPDA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 SGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 IEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRT
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 AIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALS
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 LIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTD
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 VVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALY
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 DIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQ
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490
pF1KA0 LRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
1450 1460 1470 1480 1490
>>CCDS11963.1 WDR7 gene_id:23335|Hs108|chr18 (1457 aa)
initn: 6376 init1: 6376 opt: 6376 Z-score: 5894.3 bits: 1103.3 E(32554): 0
Smith-Waterman score: 9660; 97.8% identity (97.8% similar) in 1490 aa overlap (1-1490:1-1457)
10 20 30 40 50 60
pF1KA0 MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELQINPRALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELQINPRALL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVSDGRCIEFTKLACTHTGIQFYQFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVSDGRCIEFTKLACTHTGIQFYQFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 SVTGILKVWIVTSEISDMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SVTGILKVWIVTSEISDMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 FDAGDYSLLCSGPSENGQTWTGGDFVSSDKVIIWTENGQSYIYKLPASCLPASDSFRSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FDAGDYSLLCSGPSENGQTWTGGDFVSSDKVIIWTENGQSYIYKLPASCLPASDSFRSDV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GKAVENLIPPVQHILLDRKDKELLICPPVTRFFYGCREYFHKLLIQGDSSGRLNIWNISD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GKAVENLIPPVQHILLDRKDKELLICPPVTRFFYGCREYFHKLLIQGDSSGRLNIWNISD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 TADKQGSEEGLAMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TADKQGSEEGLAMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 GGHMSLMLPGYNQPACKLSHGKTEVGRKLPASEGVGKGTYGVSRAVTTQHLLSIISLANT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GGHMSLMLPGYNQPACKLSHGKTEVGRKLPASEGVGKGTYGVSRAVTTQHLLSIISLANT
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 LMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSD
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQ-----------
910 920 930 940
970 980 990 1000 1010 1020
pF1KA0 ADHSGSDPPSAPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRC
::::::::::::::::::::::::::::::::::::::
CCDS11 ----------------------GWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRC
950 960 970 980
1030 1040 1050 1060 1070 1080
pF1KA0 LEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYIDHVISPGVTSEAAQTITTAPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYIDHVISPGVTSEAAQTITTAPDA
990 1000 1010 1020 1030 1040
1090 1100 1110 1120 1130 1140
pF1KA0 SGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAE
1050 1060 1070 1080 1090 1100
1150 1160 1170 1180 1190 1200
pF1KA0 IEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRT
1110 1120 1130 1140 1150 1160
1210 1220 1230 1240 1250 1260
pF1KA0 AIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALS
1170 1180 1190 1200 1210 1220
1270 1280 1290 1300 1310 1320
pF1KA0 LIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTD
1230 1240 1250 1260 1270 1280
1330 1340 1350 1360 1370 1380
pF1KA0 VVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALY
1290 1300 1310 1320 1330 1340
1390 1400 1410 1420 1430 1440
pF1KA0 DIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQ
1350 1360 1370 1380 1390 1400
1450 1460 1470 1480 1490
pF1KA0 LRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
1410 1420 1430 1440 1450
>>CCDS10151.1 WDR72 gene_id:256764|Hs108|chr15 (1102 aa)
initn: 1273 init1: 1054 opt: 2063 Z-score: 1907.4 bits: 365.2 E(32554): 6.3e-100
Smith-Waterman score: 2074; 37.4% identity (67.5% similar) in 933 aa overlap (10-904:8-917)
10 20 30 40 50 60
pF1KA0 MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELQINPRALL
..:::.::: : :.:...::: ::::: ..::.:::.:: ::.:. . ::
CCDS10 MRTSLQAVALWGQKAPPHSITAIMITDDQRTIVTGSQEGQLCLWNLSHELKISAKELL
10 20 30 40 50
70 80 90 100 110 120
pF1KA0 FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVSDGRCIEFTKLACTHTGIQFYQFS
:::.::.:::..: : . :::::.:.::::.:.:..:.:.: . : ::.: .:. :
CCDS10 FGHSASVTCLARARDFSKQPYIVSAAENGEMCVWNVTNGQCMEKATLPYRHTAICYYHCS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KA0 VGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
:: ::: :.: ..:..:: .: :..:. :. ::::. : :..: : :::.....
CCDS10 FRMTGEGWLLCCGEYQDVLIIDAKTLAVVHSFRSSQFPDWINCMCIVHSMRIQEDSLLVV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KA0 SVTGILKVWIVTSEISDMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
::.: :::: ..: :...:. . ..:.::: . :::.: ::..:.: :::: :: :.:
CCDS10 SVAGELKVWDLSSSINSIQEKQDVYEKESKFLESLNCQTIRFCTYTERLLLVVFSKCWKV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KA0 FDAGDYSLLCSGPSENGQTWTGGDFVSSDKVIIWTENGQSYIYKLPASCLPASDSFRSDV
.: :.::: . :.::: ..::. ... ...::::.:.::::.: : : : :.
CCDS10 YDYCDFSLLLTEVSRNGQFFAGGEVIAAHRILIWTEDGHSYIYQLLNSGL--SKSIYPAD
240 250 260 270 280 290
310 320 330 340 350
pF1KA0 GKAVENLIPPVQHILLD---RKDKELLICPPVTRFFYGCREYFHKLLIQGDSSGRLNIWN
:..... : : :.: . ...:: : : .. .: :.:.:..:. :::...:.
CCDS10 GRVLKETIYP--HLLCSTSVQENKEQSR-PFVMGYMNERKEPFYKVLFSGEVSGRITLWH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KA0 ISDTADKQ--GSEEGLAMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYI
: :. .. :: . . .:.. .::. ::: . .::: .: . .. ::.: ::
CCDS10 IPDVPVSKFDGSPREIPVTATWTLQDNFDKHDTMSQSIIDYFSGLKDGAGTAVVTSSEYI
360 370 380 390 400 410
420 430 440 450 460 470
pF1KA0 PAHGRLVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQ
:. .:.:: :::.:.:. : ..: ..::.: ... . :::..:.::...:: :::::
CCDS10 PSLDKLICGCEDGTIIITQALNAAKARLLEGGSLVKDS-PPHKVLKGHHQSVTSLLYPHG
420 430 440 450 460 470
480 490 500 510 520 530
pF1KA0 VSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICS
.:.. :: ...:: .: ::.::::. :. : : ...: .:.::. ::. . : .. ::
CCDS10 LSSKLDQSWMLSGDLDSCVILWDIFTEEILHKFFLEAGPVTSLLMSPEKFKLRGEQIICC
480 490 500 510 520 530
540 550 560 570 580 590
pF1KA0 VASDHSVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALD
: .::::.:: :. :.:.. : .::::...:::.: ...:.:::.: :::.:...::.:.
CCDS10 VCGDHSVALLHLEGKSCLLHARKHLFPVRMIKWHPVENFLIVGCADDSVYIWEIETGTLE
540 550 560 570 580 590
600 610 620 630 640
pF1KA0 RCVMGITAVEILNACDEA------VPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQ
: : : ::: ::.. .: : ..:.: ... ... . ..:
CCDS10 RHETGERARIILNCCDDSQLVKSVLPIASETLKHKSIEQRSS------------SPYQLG
600 610 620 630 640
650 660 670 680 690 700
pF1KA0 TLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASR
: : :.: : . :. . : .::. .. .:.:.::.: :. :: :
CCDS10 PLPCPGLQVESSCKVTDAKFCPRPFNVLPVKTKWSNVGFHILLFDLENLVELLLPTPLSD
650 660 670 680 690 700
710 720 730 740 750 760
pF1KA0 --PNTALISPENLQKASGSSDKGGSFLTGKRAA-------VLFQQVKETIKENIKEHLLD
.... . : :..:... .: : ...: .: . . :.. .. .. .
CCDS10 VDSSSSFYGGEVLRRAKSTVEKKTLTLRKSKTACGPLSAEALAKPITESLAQG--DNTIK
710 720 730 740 750
770 780 790 800 810 820
pF1KA0 DEEEDEEIMRQRREESDPEYRSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVC
::.. : ::.. . . .. . :: .. .::.::::::.::: ::... :: .:
CCDS10 FSEENDGIKRQKKMKIS---KKMQPKPSRKVDASLTIDTAKLFLSCLLPWGVDKDLDYLC
760 770 780 790 800 810
830 840 850 860
pF1KA0 LDRLGMLKPHCTVSFGLLSRGGHMSLMLPGY---NQPACKLSHGKTEVGRK---------
. .:..:: . .:.:. ..::::::. :. : : . .::
CCDS10 IKHLNILKLQGPISLGISLNEDNFSLMLPGWDLCNSGMIKDYSGVNLFSRKVLDLSDKYT
820 830 840 850 860 870
870 880 890 900 910 920
pF1KA0 --LPASEGVGKGTYG----VSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTRPP
:: . :. .: . . .. : .::: . :.: :..:
CCDS10 ATLPNQVGIPRGLENNCDSLRESDTIVYLLSRLFLVNKLVNMPLELACRVGSSFRMESIH
880 890 900 910 920 930
930 940 950 960 970 980
pF1KA0 RPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSDADHSGSDPPSAPALHTCFLVNE
CCDS10 NKMRGAGNDILNMSSFYSCLRNGKNESHVPEADLSLLKLISCWRDQSVQVTEAIQAVLLA
940 950 960 970 980 990
1490 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 19:13:37 2016 done: Wed Nov 2 19:13:38 2016
Total Scan time: 3.150 Total Display time: 0.160
Function used was FASTA [36.3.4 Apr, 2011]