##################################
# NO CUT ENZYMES ( 208 enzymes) #
##################################
AatII Acc65I AccI AccII AccIII
AclI AcyI AfaI AflII AflIII
AgeI AhdI Alw44I AlwNI AocI
Aor51HI ApaI ApaLI AscI AseI
AsnI Asp700I Asp718I AspEI AspHI
AspI AvaI AviII AvrII BalI
BamHI BanI BanII BbeI BbrPI
BbsI BbvCI BbvI BcgI BciVI
BclI BcnI BfrI BglI BglII
BlnI BlpI BmyI Bpu1102I BpuAI
BsaAI BsaBI BsaHI BsaI BsaWI
BseAI BsgI BsiEI BsiHKAI BsiWI
BsiYI BslI BsmFI BsmI BsoBI
Bsp1286I Bsp1407I BspDI BspEI BspHI
BspLU11I BspMI BsrBI BsrDI BsrFI
BsrGI BsrI BssHII BssSI Bst1107I
BstAPI BstBI BstEII BstF5I BstPI
BstUI BstXI BstZ17I Bsu36I Cac8I
CelII CfoI Cfr10I ClaI CpoI
DraI DraIII DrdI DsaI EaeI
EagI Eam1105I EclXI Eco47III Eco52I
Eco81I EcoNI EcoO65I EcoRI EcoRV
EcoT14I EcoT22I FauI FbaI Fnu4HI
FokI FseI FspI HaeII HapII
HgaI HhaI Hin1I HinP1I HincII
HindII HindIII HpaI HpaII HphI
ItaI KasI KpnI KspI MaeII
MamI MfeI MluI MluNI MroI
MscI MslI MspA1I MspI MunI
MvnI NaeI NarI NciI NcoI
NdeI NgoMIV NheI NlaIV NotI
NruI NsiI NspI NspV PacI
PaeR7I PflFI PflMI PinAI PleI
PmaCI PmeI PmlI PshAI PshBI
Psp1406I PstI PvuI PvuII RcaI
RsaI RsrII SacI SacII SalI
SbfI ScaI SexAI SfcI SfiI
SfoI SfuI SgrAI SmaI SnaBI
SpeI SphI Sse8387I SspBI SspI
StuI StyI SwaI TseI Tsp45I
Tth111I Van91I XbaI XcmI XhoI
XmaCI XmaI XmnI
###################################
# ONE CUT ENZYMES ( 35 enzymes) #
###################################
AciI 63 GCGG CCGC(-3/-1)
AvaII 175 GGACC G^G[AT]CC
BfaI 188 CTAG C^TAG
BsaJI 317 CCCAGG C^C[ACGT][ACGT]GG
BseRI 27 CTCCTC GAGGAG(10/8)
BsmAI 49 GTCTC GTCTC(1/5)
BsmBI 48 CGTCTC CGTCTC(1/5)
BssKI 318 CCAGG ^CC[ACGT]GG
BstNI 318 CCAGG CC^[AT]GG
BstYI 288 AGATCC [GA]^GATC[CT]
Cfr13I 175 GGACC G^G[ACGT]CC
DraII 174 AGGACCT [GA]G^G[ACGT]CC[CT]
EarI 16 CTCTTC CTCTTC(1/4)
EcoO109I 174 AGGACCT [GA]G^G[ACGT]CC[CT]
EcoRII 318 CCAGG ^CC[AT]GG
HaeIII 321 GGCC GG^CC
HinfI 3 GATTC G^A[ACGT]TC
Ksp632I 16 CTCTTC CTCTTC(1/4)
MaeI 188 CTAG C^TAG
MaeIII 79 GTTAC ^GT[ACGT]AC
MflI 288 AGATCC [GA]^GATC[CT]
MvaI 318 CCAGG CC^[AT]GG
MwoI 222 GCTTTTTAAGC GC[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GC
NlaIII 258 CATG CATG^
PpuMI 174 AGGACCT [GA]G^G[AT]CC[CT]
SapI 15 GCTCTTC GCTCTTC(1/4)
Sau96I 175 GGACC G^G[ACGT]CC
ScrFI 318 CCAGG CC^[ACGT]GG
SfaNI 184 GATGC GCATC(5/9)
SmlI 232 CTCAAG C^T[CT][GA]AG
TaqI 308 TCGA T^CGA
TfiI 3 GATTC G^A[AT]TC
TspRI 86 CAGTG CA[GC]TG[ACGT][ACGT]^
TthHB8I 308 TCGA T^CGA
XhoII 288 AGATCC [GA]^GATC[CT]
###################################
# TWO CUT ENZYMES ( 12 enzymes) #
###################################
AcsI 280 AAATTT [GA]^AATT[CT]
295 AAATTT
AlwI 109 GATCC GGATC(4/5)
289 GATCC
ApoI 280 AAATTT [GA]^AATT[CT]
295 AAATTT
BpmI 170 CTGGAG CTGGAG(16/14)
211 CTGGAG
DdeI 51 CTCAG C^T[ACGT]AG
155 CTAAG
DpnII 109 GATC ^GATC
289 GATC
MboI 109 GATC ^GATC
289 GATC
MseI 95 TTAA T^TAA
227 TTAA
NdeII 109 GATC ^GATC
289 GATC
Sau3AI 109 GATC ^GATC
289 GATC
Tru9I 95 TTAA T^TAA
227 TTAA
Tsp509I 281 AATT ^AATT
296 AATT
#########################################
# 3 OR MORE CUT ENZYMES ( 3 enzymes) #
#########################################
AluI MboII MnlI