FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE9695, 655 aa
  1>>>pF1KE9695 655 - 655 aa - 655 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.1632+/-0.00116; mu= -2.2177+/- 0.069
 mean_var=298.5350+/-61.547, 0's: 0 Z-trim(111.2): 190  B-trim: 0 in 0/52
 Lambda= 0.074230
 statistics sampled from 11971 (12170) to 11971 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.374), width:  16
 Scan time:  4.200

The best scores are:                                      opt bits E(32554)
CCDS10788.1 KATNB1 gene_id:10300|Hs108|chr16       ( 655) 4406 486.0 7.1e-137


>>CCDS10788.1 KATNB1 gene_id:10300|Hs108|chr16            (655 aa)
 initn: 4406 init1: 4406 opt: 4406  Z-score: 2570.9  bits: 486.0 E(32554): 7.1e-137
Smith-Waterman score: 4406; 100.0% identity (100.0% similar) in 655 aa overlap (1-655:1-655)

               10        20        30        40        50        60
pF1KE9 MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE9 DLTRVTRTGTVARDPVQDHRPLAQPLPNPSAPLRRIYERPSTTCSKPQRVKQNSESERRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DLTRVTRTGTVARDPVQDHRPLAQPLPNPSAPLRRIYERPSTTCSKPQRVKQNSESERRS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE9 PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDAATAKEAAKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDAATAKEAAKP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE9 SPAMDVQFPVPNLEVLPRPPVVASTPAPKAEPAIIPATRNEPIGLKASDFLPAVKIPQQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SPAMDVQFPVPNLEVLPRPPVVASTPAPKAEPAIIPATRNEPIGLKASDFLPAVKIPQQA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE9 ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVVVDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVVVDL
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE9 LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLAAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLAAP
              550       560       570       580       590       600

              610       620       630       640       650     
pF1KE9 PSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSTFRELHLLMASLD
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSTFRELHLLMASLD
              610       620       630       640       650     




655 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 10:43:53 2016 done: Tue Nov  8 10:43:54 2016
 Total Scan time:  4.200 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]