Result of FASTA (omim) for
pFN21AE9674
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9674, 954 aa
1>>>pF1KE9674 954 - 954 aa - 954 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6638+/-0.000434; mu= 6.1579+/- 0.027
mean_var=210.6033+/-44.485, 0's: 0 Z-trim(116.0): 243 B-trim: 267 in 1/56
Lambda= 0.088377
statistics sampled from 26548 (26809) to 26548 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.314), width: 16
Scan time: 12.560
The best scores are: opt bits E(85289)
XP_005246689 (OMIM: 242900,606622) PREDICTED: SWI/ ( 954) 6236 809.0 0
NP_054859 (OMIM: 242900,606622) SWI/SNF-related ma ( 954) 6236 809.0 0
NP_001120679 (OMIM: 242900,606622) SWI/SNF-related ( 954) 6236 809.0 0
XP_005246688 (OMIM: 242900,606622) PREDICTED: SWI/ ( 954) 6236 809.0 0
XP_016859717 (OMIM: 242900,606622) PREDICTED: SWI/ ( 650) 3801 498.4 4.8e-140
XP_011510268 (OMIM: 615655) PREDICTED: DNA anneali (1038) 854 122.8 8.8e-27
XP_016860560 (OMIM: 615655) PREDICTED: DNA anneali (1038) 854 122.8 8.8e-27
XP_011510265 (OMIM: 615655) PREDICTED: DNA anneali (1077) 854 122.9 9.1e-27
NP_001273497 (OMIM: 615655) DNA annealing helicase (1077) 854 122.9 9.1e-27
XP_005263866 (OMIM: 615655) PREDICTED: DNA anneali (1079) 854 122.9 9.1e-27
NP_115519 (OMIM: 615655) DNA annealing helicase an (1079) 854 122.9 9.1e-27
XP_011510260 (OMIM: 615655) PREDICTED: DNA anneali (1079) 854 122.9 9.1e-27
XP_011510262 (OMIM: 615655) PREDICTED: DNA anneali (1079) 854 122.9 9.1e-27
XP_006712851 (OMIM: 615655) PREDICTED: DNA anneali (1079) 854 122.9 9.1e-27
XP_016860559 (OMIM: 615655) PREDICTED: DNA anneali (1096) 854 122.9 9.2e-27
XP_016860558 (OMIM: 615655) PREDICTED: DNA anneali (1098) 854 122.9 9.2e-27
XP_016860557 (OMIM: 615655) PREDICTED: DNA anneali (1098) 854 122.9 9.2e-27
XP_016860554 (OMIM: 615655) PREDICTED: DNA anneali (1098) 854 122.9 9.2e-27
XP_016860555 (OMIM: 615655) PREDICTED: DNA anneali (1098) 854 122.9 9.2e-27
XP_016860556 (OMIM: 615655) PREDICTED: DNA anneali (1098) 854 122.9 9.2e-27
XP_011510263 (OMIM: 615655) PREDICTED: DNA anneali (1098) 854 122.9 9.2e-27
XP_011510261 (OMIM: 615655) PREDICTED: DNA anneali (1098) 854 122.9 9.2e-27
NP_001275999 (OMIM: 603946,616911) lymphoid-specif ( 740) 319 54.5 2.3e-06
XP_011519988 (OMIM: 610169) PREDICTED: DNA helicas ( 906) 290 50.9 3.5e-05
NP_060023 (OMIM: 610169) DNA helicase INO80 [Homo (1556) 290 51.1 5.3e-05
XP_016872369 (OMIM: 605191) PREDICTED: TATA-bindin (1519) 287 50.7 6.8e-05
XP_016872370 (OMIM: 605191) PREDICTED: TATA-bindin (1519) 287 50.7 6.8e-05
XP_016872368 (OMIM: 605191) PREDICTED: TATA-bindin (1519) 287 50.7 6.8e-05
XP_016872367 (OMIM: 605191) PREDICTED: TATA-bindin (1646) 287 50.7 7.3e-05
XP_011538630 (OMIM: 605191) PREDICTED: TATA-bindin (1693) 287 50.7 7.4e-05
XP_011538629 (OMIM: 605191) PREDICTED: TATA-bindin (1725) 287 50.7 7.5e-05
XP_016872366 (OMIM: 605191) PREDICTED: TATA-bindin (1800) 287 50.7 7.8e-05
XP_011538628 (OMIM: 605191) PREDICTED: TATA-bindin (1812) 287 50.7 7.8e-05
NP_003963 (OMIM: 605191) TATA-binding protein-asso (1849) 287 50.8 7.9e-05
XP_011516949 (OMIM: 615667,615715) PREDICTED: DNA (1178) 282 50.0 8.7e-05
XP_011516948 (OMIM: 615667,615715) PREDICTED: DNA (1184) 282 50.0 8.8e-05
XP_011516947 (OMIM: 615667,615715) PREDICTED: DNA (1253) 282 50.0 9.2e-05
XP_011516946 (OMIM: 615667,615715) PREDICTED: DNA (1263) 282 50.0 9.2e-05
XP_016883590 (OMIM: 616114) PREDICTED: chromodomai (2668) 287 50.9 0.00011
NP_064592 (OMIM: 615667,615715) DNA excision repai (1561) 282 50.1 0.00011
NP_001010895 (OMIM: 615667,615715) DNA excision re ( 712) 275 48.9 0.00011
XP_011516943 (OMIM: 615667,615715) PREDICTED: DNA (1510) 276 49.3 0.00018
NP_060139 (OMIM: 300687) DNA excision repair prote (1250) 266 47.9 0.00038
NP_001276004 (OMIM: 603946,616911) lymphoid-specif ( 432) 255 46.2 0.00044
NP_001276003 (OMIM: 603946,616911) lymphoid-specif ( 477) 255 46.2 0.00048
NP_006653 (OMIM: 136140,611421) helicase SRCAP [Ho (3230) 270 48.8 0.00055
NP_001276002 (OMIM: 603946,616911) lymphoid-specif ( 700) 255 46.3 0.00064
NP_001276001 (OMIM: 603946,616911) lymphoid-specif ( 708) 255 46.3 0.00064
NP_001276000 (OMIM: 603946,616911) lymphoid-specif ( 714) 255 46.3 0.00065
XP_016863953 (OMIM: 136000,612761) PREDICTED: SWI/ ( 505) 251 45.7 0.00071
>>XP_005246689 (OMIM: 242900,606622) PREDICTED: SWI/SNF- (954 aa)
initn: 6236 init1: 6236 opt: 6236 Z-score: 4310.9 bits: 809.0 E(85289): 0
Smith-Waterman score: 6236; 99.8% identity (100.0% similar) in 954 aa overlap (1-954:1-954)
10 20 30 40 50 60
pF1KE9 MSLPLTEEQRKKIEENRQKALGRRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
XP_005 MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 DSRRYDVKTRKWSFLLQEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
XP_005 DSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE9 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE9 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
850 860 870 880 890 900
910 920 930 940 950
pF1KE9 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
910 920 930 940 950
>>NP_054859 (OMIM: 242900,606622) SWI/SNF-related matrix (954 aa)
initn: 6236 init1: 6236 opt: 6236 Z-score: 4310.9 bits: 809.0 E(85289): 0
Smith-Waterman score: 6236; 99.8% identity (100.0% similar) in 954 aa overlap (1-954:1-954)
10 20 30 40 50 60
pF1KE9 MSLPLTEEQRKKIEENRQKALGRRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
NP_054 MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 DSRRYDVKTRKWSFLLQEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_054 DSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE9 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE9 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
850 860 870 880 890 900
910 920 930 940 950
pF1KE9 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
910 920 930 940 950
>>NP_001120679 (OMIM: 242900,606622) SWI/SNF-related mat (954 aa)
initn: 6236 init1: 6236 opt: 6236 Z-score: 4310.9 bits: 809.0 E(85289): 0
Smith-Waterman score: 6236; 99.8% identity (100.0% similar) in 954 aa overlap (1-954:1-954)
10 20 30 40 50 60
pF1KE9 MSLPLTEEQRKKIEENRQKALGRRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
NP_001 MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 DSRRYDVKTRKWSFLLQEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 DSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE9 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE9 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
850 860 870 880 890 900
910 920 930 940 950
pF1KE9 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
910 920 930 940 950
>>XP_005246688 (OMIM: 242900,606622) PREDICTED: SWI/SNF- (954 aa)
initn: 6236 init1: 6236 opt: 6236 Z-score: 4310.9 bits: 809.0 E(85289): 0
Smith-Waterman score: 6236; 99.8% identity (100.0% similar) in 954 aa overlap (1-954:1-954)
10 20 30 40 50 60
pF1KE9 MSLPLTEEQRKKIEENRQKALGRRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
XP_005 MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 DSRRYDVKTRKWSFLLQEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
XP_005 DSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE9 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE9 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
850 860 870 880 890 900
910 920 930 940 950
pF1KE9 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
910 920 930 940 950
>>XP_016859717 (OMIM: 242900,606622) PREDICTED: SWI/SNF- (650 aa)
initn: 3801 init1: 3801 opt: 3801 Z-score: 2635.3 bits: 498.4 E(85289): 4.8e-140
Smith-Waterman score: 3801; 99.7% identity (100.0% similar) in 589 aa overlap (366-954:62-650)
340 350 360 370 380 390
pF1KE9 MLISRAYFEADISYSQDLIALFKQMDSRRYDVKTRKWSFLLQEHSKLIAKVRCLPQVQLD
.::::::::::.::::::::::::::::::
XP_016 SSPGPTSRQTSVIHRTLLRFLNRWIPEDMANVKTRKWSFLLEEHSKLIAKVRCLPQVQLD
40 50 60 70 80 90
400 410 420 430 440 450
pF1KE9 PLPTTLTLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLPTTLTLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLL
100 110 120 130 140 150
460 470 480 490 500 510
pF1KE9 LADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTG
160 170 180 190 200 210
520 530 540 550 560 570
pF1KE9 KDRLTAGLINIVSFDLLSKLEKQLKTPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDRLTAGLINIVSFDLLSKLEKQLKTPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRV
220 230 240 250 260 270
580 590 600 610 620 630
pF1KE9 ILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKL
280 290 300 310 320 330
640 650 660 670 680 690
pF1KE9 LLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQK
340 350 360 370 380 390
700 710 720 730 740 750
pF1KE9 DALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRI
400 410 420 430 440 450
760 770 780 790 800 810
pF1KE9 DGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAE
460 470 480 490 500 510
820 830 840 850 860 870
pF1KE9 DRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYK
520 530 540 550 560 570
880 890 900 910 920 930
pF1KE9 DPKQQKIYDLFQKSFEKEGSDMELLEAAESFDPGSASGTSGSSSQNMGDTLDESSLTASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPKQQKIYDLFQKSFEKEGSDMELLEAAESFDPGSASGTSGSSSQNMGDTLDESSLTASP
580 590 600 610 620 630
940 950
pF1KE9 QKKRRFEFFDNWDSFTSPL
:::::::::::::::::::
XP_016 QKKRRFEFFDNWDSFTSPL
640 650
>>XP_011510268 (OMIM: 615655) PREDICTED: DNA annealing h (1038 aa)
initn: 1021 init1: 488 opt: 854 Z-score: 601.8 bits: 122.8 E(85289): 8.8e-27
Smith-Waterman score: 1097; 45.1% identity (72.4% similar) in 406 aa overlap (460-852:1-405)
430 440 450 460 470 480
pF1KE9 PKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSV
:::::::::: :. ::..:::::.:::::.
XP_011 MGLGKTIQAIGITYFYKEEWPLLIVVPSSL
10 20 30
490 500 510 520 530 540
pF1KE9 RFTWEQAFLRWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTP
:. : . . .:.: :::. :::. . : :.... ...... ::. : : .
XP_011 RYPWTEEIEKWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQN
40 50 60 70 80 90
550 560 570 580 590 600
pF1KE9 FKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFF
:::::.::::..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : :
XP_011 FKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKF
100 110 120 130 140 150
610 620 630 640 650
pF1KE9 PQFHAFGLRYCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQ
.. .. :::.:. .: :: :.:::.::. :: . .:.::::..::.::: :
XP_011 GRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKV
160 170 180 190 200
660 670 680 690 700 710
pF1KE9 R-KIVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEY
: .: :. . .... : : : .. .. .:: .:..:: :: .: .:
XP_011 RQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDY
210 220 230 240 250 260
720 730 740 750 760 770
pF1KE9 ILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSER
: .:.. :::::::: .:.: :. . ......::::::.::.:: : .::: .
XP_011 IKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPD
270 280 290 300 310 320
780 790 800 810 820 830
pF1KE9 HAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKG
::.::: ::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:
XP_011 TRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANG
330 340 350 360 370 380
840 850 860 870 880 890
pF1KE9 TADDYLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSD
: : .: ....: .:
XP_011 TLDTLMWGMLNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEA
390 400 410 420 430 440
>>XP_016860560 (OMIM: 615655) PREDICTED: DNA annealing h (1038 aa)
initn: 1021 init1: 488 opt: 854 Z-score: 601.8 bits: 122.8 E(85289): 8.8e-27
Smith-Waterman score: 1097; 45.1% identity (72.4% similar) in 406 aa overlap (460-852:1-405)
430 440 450 460 470 480
pF1KE9 PKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSV
:::::::::: :. ::..:::::.:::::.
XP_016 MGLGKTIQAIGITYFYKEEWPLLIVVPSSL
10 20 30
490 500 510 520 530 540
pF1KE9 RFTWEQAFLRWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTP
:. : . . .:.: :::. :::. . : :.... ...... ::. : : .
XP_016 RYPWTEEIEKWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQN
40 50 60 70 80 90
550 560 570 580 590 600
pF1KE9 FKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFF
:::::.::::..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : :
XP_016 FKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKF
100 110 120 130 140 150
610 620 630 640 650
pF1KE9 PQFHAFGLRYCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQ
.. .. :::.:. .: :: :.:::.::. :: . .:.::::..::.::: :
XP_016 GRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKV
160 170 180 190 200
660 670 680 690 700 710
pF1KE9 R-KIVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEY
: .: :. . .... : : : .. .. .:: .:..:: :: .: .:
XP_016 RQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDY
210 220 230 240 250 260
720 730 740 750 760 770
pF1KE9 ILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSER
: .:.. :::::::: .:.: :. . ......::::::.::.:: : .::: .
XP_016 IKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPD
270 280 290 300 310 320
780 790 800 810 820 830
pF1KE9 HAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKG
::.::: ::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:
XP_016 TRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANG
330 340 350 360 370 380
840 850 860 870 880 890
pF1KE9 TADDYLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSD
: : .: ....: .:
XP_016 TLDTLMWGMLNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEA
390 400 410 420 430 440
>>XP_011510265 (OMIM: 615655) PREDICTED: DNA annealing h (1077 aa)
initn: 1120 init1: 488 opt: 854 Z-score: 601.6 bits: 122.9 E(85289): 9.1e-27
Smith-Waterman score: 1206; 44.2% identity (72.0% similar) in 457 aa overlap (415-852:10-465)
390 400 410 420 430
pF1KE9 KVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVP----EAD--LSEVDPKLVSNLMP
:::: . :.: :. . .: ..:.:
XP_011 MPRVHNIKKSLTPHISCVTNESDNLLDFLPDRLRAKLLP
10 20 30
440 450 460 470 480 490
pF1KE9 FQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFL
::. :. ::. ..:: ..::.:::::::::: :. ::..:::::.:::::.:. : . .
XP_011 FQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIE
40 50 60 70 80 90
500 510 520 530 540 550
pF1KE9 RWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTPFKVVIIDES
.:.: :::. :::. . : :.... ...... ::. : : . :::::.:::
XP_011 KWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDES
100 110 120 130 140 150
560 570 580 590 600 610
pF1KE9 HFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLR
:..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : : .. .. :
XP_011 HYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKR
160 170 180 190 200 210
620 630 640 650 660
pF1KE9 YCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQR-KIVVIAP
::.:. .: :: :.:::.::. :: . .:.::::..::.::: : : .: :
XP_011 YCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKVRQRIPFDLP
220 230 240 250 260 270
670 680 690 700 710 720
pF1KE9 GRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEYILDLLESGR
. . .... : : : .. .. .:: .:..:: :: .: .:: .:..
XP_011 SAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDS
280 290 300 310 320 330
730 740 750 760 770 780
pF1KE9 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT
:::::::: .:.: :. . ......::::::.::.:: : .::: . ::.:::
XP_011 LKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQ
340 350 360 370 380 390
790 800 810 820 830 840
pF1KE9 AANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPL
::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:: : .: .
XP_011 AAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGM
400 410 420 430 440 450
850 860 870 880 890 900
pF1KE9 IQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAES
...: .:
XP_011 LNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEALFTHFEKEK
460 470 480 490 500 510
>>NP_001273497 (OMIM: 615655) DNA annealing helicase and (1077 aa)
initn: 1120 init1: 488 opt: 854 Z-score: 601.6 bits: 122.9 E(85289): 9.1e-27
Smith-Waterman score: 1206; 44.2% identity (72.0% similar) in 457 aa overlap (415-852:10-465)
390 400 410 420 430
pF1KE9 KVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVP----EAD--LSEVDPKLVSNLMP
:::: . :.: :. . .: ..:.:
NP_001 MPRVHNIKKSLTPHISCVTNESDNLLDFLPDRLRAKLLP
10 20 30
440 450 460 470 480 490
pF1KE9 FQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFL
::. :. ::. ..:: ..::.:::::::::: :. ::..:::::.:::::.:. : . .
NP_001 FQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIE
40 50 60 70 80 90
500 510 520 530 540 550
pF1KE9 RWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTPFKVVIIDES
.:.: :::. :::. . : :.... ...... ::. : : . :::::.:::
NP_001 KWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDES
100 110 120 130 140 150
560 570 580 590 600 610
pF1KE9 HFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLR
:..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : : .. .. :
NP_001 HYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKR
160 170 180 190 200 210
620 630 640 650 660
pF1KE9 YCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQR-KIVVIAP
::.:. .: :: :.:::.::. :: . .:.::::..::.::: : : .: :
NP_001 YCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKVRQRIPFDLP
220 230 240 250 260 270
670 680 690 700 710 720
pF1KE9 GRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEYILDLLESGR
. . .... : : : .. .. .:: .:..:: :: .: .:: .:..
NP_001 SAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDS
280 290 300 310 320 330
730 740 750 760 770 780
pF1KE9 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT
:::::::: .:.: :. . ......::::::.::.:: : .::: . ::.:::
NP_001 LKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQ
340 350 360 370 380 390
790 800 810 820 830 840
pF1KE9 AANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPL
::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:: : .: .
NP_001 AAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGM
400 410 420 430 440 450
850 860 870 880 890 900
pF1KE9 IQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAES
...: .:
NP_001 LNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEALFTHFEKEK
460 470 480 490 500 510
>>XP_005263866 (OMIM: 615655) PREDICTED: DNA annealing h (1079 aa)
initn: 1120 init1: 488 opt: 854 Z-score: 601.6 bits: 122.9 E(85289): 9.1e-27
Smith-Waterman score: 1206; 44.2% identity (72.0% similar) in 457 aa overlap (415-852:10-465)
390 400 410 420 430
pF1KE9 KVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVP----EAD--LSEVDPKLVSNLMP
:::: . :.: :. . .: ..:.:
XP_005 MPRVHNIKKSLTPHISCVTNESDNLLDFLPDRLRAKLLP
10 20 30
440 450 460 470 480 490
pF1KE9 FQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFL
::. :. ::. ..:: ..::.:::::::::: :. ::..:::::.:::::.:. : . .
XP_005 FQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIE
40 50 60 70 80 90
500 510 520 530 540 550
pF1KE9 RWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTPFKVVIIDES
.:.: :::. :::. . : :.... ...... ::. : : . :::::.:::
XP_005 KWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDES
100 110 120 130 140 150
560 570 580 590 600 610
pF1KE9 HFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLR
:..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : : .. .. :
XP_005 HYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKR
160 170 180 190 200 210
620 630 640 650 660
pF1KE9 YCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQR-KIVVIAP
::.:. .: :: :.:::.::. :: . .:.::::..::.::: : : .: :
XP_005 YCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKVRQRIPFDLP
220 230 240 250 260 270
670 680 690 700 710 720
pF1KE9 GRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEYILDLLESGR
. . .... : : : .. .. .:: .:..:: :: .: .:: .:..
XP_005 SAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDS
280 290 300 310 320 330
730 740 750 760 770 780
pF1KE9 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT
:::::::: .:.: :. . ......::::::.::.:: : .::: . ::.:::
XP_005 LKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQ
340 350 360 370 380 390
790 800 810 820 830 840
pF1KE9 AANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPL
::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:: : .: .
XP_005 AAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGM
400 410 420 430 440 450
850 860 870 880 890 900
pF1KE9 IQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAES
...: .:
XP_005 LNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEALFTHFEKEK
460 470 480 490 500 510
954 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:10:42 2016 done: Mon Nov 7 01:10:44 2016
Total Scan time: 12.560 Total Display time: 0.200
Function used was FASTA [36.3.4 Apr, 2011]