Result of FASTA (omim) for
pFN21AE9574
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9574, 350 aa
1>>>pF1KE9574 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9856+/-0.000435; mu= 17.8201+/- 0.027
mean_var=102.3404+/-26.407, 0's: 0 Z-trim(109.9): 629 B-trim: 1051 in 1/48
Lambda= 0.126780
statistics sampled from 17407 (18184) to 17407 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.555), E-opt: 0.2 (0.213), width: 16
Scan time: 7.700
The best scores are: opt bits E(85289)
NP_001727 (OMIM: 113995) C5a anaphylatoxin chemota ( 350) 2308 433.5 3.3e-121
XP_005259247 (OMIM: 113995) PREDICTED: C5a anaphyl ( 231) 1510 287.3 2.2e-77
XP_011525038 (OMIM: 609949) PREDICTED: C5a anaphyl ( 337) 774 152.9 9.4e-37
NP_060955 (OMIM: 609949) C5a anaphylatoxin chemota ( 337) 774 152.9 9.4e-37
NP_001258678 (OMIM: 609949) C5a anaphylatoxin chem ( 337) 774 152.9 9.4e-37
NP_001258679 (OMIM: 609949) C5a anaphylatoxin chem ( 337) 774 152.9 9.4e-37
NP_001248383 (OMIM: 600239) G-protein coupled rece ( 355) 628 126.2 1.1e-28
XP_016859321 (OMIM: 600239) PREDICTED: G-protein c ( 355) 628 126.2 1.1e-28
XP_005246528 (OMIM: 600239) PREDICTED: G-protein c ( 355) 628 126.2 1.1e-28
NP_001248381 (OMIM: 600239) G-protein coupled rece ( 355) 628 126.2 1.1e-28
NP_005270 (OMIM: 600239) G-protein coupled recepto ( 355) 628 126.2 1.1e-28
NP_001248382 (OMIM: 600239) G-protein coupled rece ( 355) 628 126.2 1.1e-28
NP_001248384 (OMIM: 600239) G-protein coupled rece ( 355) 628 126.2 1.1e-28
NP_001091669 (OMIM: 600239) G-protein coupled rece ( 355) 628 126.2 1.1e-28
NP_001313406 (OMIM: 605246) C3a anaphylatoxin chem ( 482) 516 105.9 1.9e-22
NP_001313404 (OMIM: 605246) C3a anaphylatoxin chem ( 482) 516 105.9 1.9e-22
NP_004045 (OMIM: 605246) C3a anaphylatoxin chemota ( 482) 516 105.9 1.9e-22
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 498 102.5 1.6e-21
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 488 100.6 5.4e-21
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 487 100.4 6.1e-21
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 483 99.7 1e-20
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 483 99.7 1e-20
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 483 99.7 1e-20
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 483 99.7 1e-20
NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 483 99.7 1e-20
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 483 99.7 1e-20
NP_001137391 (OMIM: 601531) leukotriene B4 recepto ( 352) 482 99.5 1.2e-20
NP_858043 (OMIM: 601531) leukotriene B4 receptor 1 ( 352) 482 99.5 1.2e-20
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 480 99.2 1.5e-20
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 480 99.2 1.5e-20
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 480 99.2 1.5e-20
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 480 99.2 1.5e-20
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 480 99.2 1.5e-20
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 480 99.2 1.5e-20
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 480 99.2 1.6e-20
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 480 99.2 1.6e-20
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 479 99.0 1.8e-20
NP_003941 (OMIM: 602779) proteinase-activated rece ( 385) 477 98.7 2.3e-20
NP_004063 (OMIM: 602351) chemokine-like receptor 1 ( 371) 472 97.7 4.2e-20
XP_016874309 (OMIM: 602351) PREDICTED: chemokine-l ( 371) 472 97.7 4.2e-20
NP_001135817 (OMIM: 602351) chemokine-like recepto ( 373) 472 97.7 4.2e-20
NP_001135816 (OMIM: 602351) chemokine-like recepto ( 373) 472 97.7 4.2e-20
NP_001135815 (OMIM: 602351) chemokine-like recepto ( 373) 472 97.7 4.2e-20
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 472 97.8 4.4e-20
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 472 97.8 4.6e-20
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 471 97.5 4.8e-20
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 471 97.5 4.8e-20
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 471 97.5 4.8e-20
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 471 97.6 4.9e-20
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 469 97.2 6.4e-20
>>NP_001727 (OMIM: 113995) C5a anaphylatoxin chemotactic (350 aa)
initn: 2308 init1: 2308 opt: 2308 Z-score: 2297.0 bits: 433.5 E(85289): 3.3e-121
Smith-Waterman score: 2308; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLGNALVVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLGNALVVW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILLNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILLNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 YASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVREE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVREE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 YFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRATRSTKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRATRSTKT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 LKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINCCINPIIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINCCINPIIY
250 260 270 280 290 300
310 320 330 340 350
pF1KE9 VVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
310 320 330 340 350
>>XP_005259247 (OMIM: 113995) PREDICTED: C5a anaphylatox (231 aa)
initn: 1510 init1: 1510 opt: 1510 Z-score: 1510.2 bits: 287.3 E(85289): 2.2e-77
Smith-Waterman score: 1510; 99.6% identity (100.0% similar) in 231 aa overlap (120-350:1-231)
90 100 110 120 130 140
pF1KE9 PILFTSIVQHHHWPFGGAACSILPSLILLNMYASILLLATISADRFLLVFKPIWCQNFRG
::::::::::::::::::::::::::::::
XP_005 MYASILLLATISADRFLLVFKPIWCQNFRG
10 20 30
150 160 170 180 190 200
pF1KE9 AGLAWIACAVAWGLALLLTIPSFLYRVVREEYFPPKVLCGVDYSHDKRRERAVAIVRLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGLAWIACAVAWGLALLLTIPSFLYRVVREEYFPPKVLCGVDYSHDKRRERAVAIVRLVL
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE9 GFLWPLLTLTICYTFILLRTWSRRATRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GFLWPLLTLTICYTFILLRTWSRRATRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLE
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE9 PSSPTFLLLNKLDSLCVSFAYINCCINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVV
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PSSPTFLLLKKLDSLCVSFAYINCCINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVV
160 170 180 190 200 210
330 340 350
pF1KE9 RESKSFTRSTVDTMAQKTQAV
:::::::::::::::::::::
XP_005 RESKSFTRSTVDTMAQKTQAV
220 230
>>XP_011525038 (OMIM: 609949) PREDICTED: C5a anaphylatox (337 aa)
initn: 769 init1: 601 opt: 774 Z-score: 780.9 bits: 152.9 E(85289): 9.4e-37
Smith-Waterman score: 797; 38.4% identity (68.9% similar) in 341 aa overlap (10-343:9-335)
10 20 30 40 50
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDIL---ALVIFAVVFLVGVLGNAL
.:: :.: . . ::: ... . : : : ..:..::::: :::.
XP_011 MGNDSVSYEYGDYSDLS----DRPVDCLDGACLAIDPLRVAPLPLYAAIFLVGVPGNAM
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 VVWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLIL
:.::.. :.: ..: :.:.:::::.: ::.:::: . :.. :::.:...: :::.::
XP_011 VAWVAGKVARRRVGATWLLHLAVADLLCCLSLPILAVPIARGGHWPYGAVGCRALPSIIL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 LNMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVV
:.::::.::::..::: .:.. : : .. . : . .::..:: ::::::.:: .:: .
XP_011 LTMYASVLLLAALSADLCFLALGPAWWSTVQRACGVQVACGAAWTLALLLTVPSAIYRRL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 REEYFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRATRS
..:.:: .. : :::. .. : ::. .:...::: ::.... :.. .: :. : :
XP_011 HQEHFPARLQCVVDYGGSSSTENAVTAIRFLFGFLGPLVAVASCHSALL--CWAARRCRP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 TKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINCCINP
: :.:..::. : ::.. :.... :.: . . . : :..: . :.::
XP_011 LGT-----AIVVGFFVCWAPYHLLGLVLTVAAPNSALLARALRAEPLIVGLALAHSCLNP
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 IIYVVAGQGFQGRLRKSLPSL----LRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
.... :.. .::.:::. ::. .. : .:: ... :. :
XP_011 MLFLYFGRA---QLRRSLPAACHWALRESQGQDESVDSKKSTSHDLVSEMEV
290 300 310 320 330
>>NP_060955 (OMIM: 609949) C5a anaphylatoxin chemotactic (337 aa)
initn: 769 init1: 601 opt: 774 Z-score: 780.9 bits: 152.9 E(85289): 9.4e-37
Smith-Waterman score: 797; 38.4% identity (68.9% similar) in 341 aa overlap (10-343:9-335)
10 20 30 40 50
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDIL---ALVIFAVVFLVGVLGNAL
.:: :.: . . ::: ... . : : : ..:..::::: :::.
NP_060 MGNDSVSYEYGDYSDLS----DRPVDCLDGACLAIDPLRVAPLPLYAAIFLVGVPGNAM
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 VVWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLIL
:.::.. :.: ..: :.:.:::::.: ::.:::: . :.. :::.:...: :::.::
NP_060 VAWVAGKVARRRVGATWLLHLAVADLLCCLSLPILAVPIARGGHWPYGAVGCRALPSIIL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 LNMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVV
:.::::.::::..::: .:.. : : .. . : . .::..:: ::::::.:: .:: .
NP_060 LTMYASVLLLAALSADLCFLALGPAWWSTVQRACGVQVACGAAWTLALLLTVPSAIYRRL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 REEYFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRATRS
..:.:: .. : :::. .. : ::. .:...::: ::.... :.. .: :. : :
NP_060 HQEHFPARLQCVVDYGGSSSTENAVTAIRFLFGFLGPLVAVASCHSALL--CWAARRCRP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 TKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINCCINP
: :.:..::. : ::.. :.... :.: . . . : :..: . :.::
NP_060 LGT-----AIVVGFFVCWAPYHLLGLVLTVAAPNSALLARALRAEPLIVGLALAHSCLNP
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 IIYVVAGQGFQGRLRKSLPSL----LRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
.... :.. .::.:::. ::. .. : .:: ... :. :
NP_060 MLFLYFGRA---QLRRSLPAACHWALRESQGQDESVDSKKSTSHDLVSEMEV
290 300 310 320 330
>>NP_001258678 (OMIM: 609949) C5a anaphylatoxin chemotac (337 aa)
initn: 769 init1: 601 opt: 774 Z-score: 780.9 bits: 152.9 E(85289): 9.4e-37
Smith-Waterman score: 797; 38.4% identity (68.9% similar) in 341 aa overlap (10-343:9-335)
10 20 30 40 50
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDIL---ALVIFAVVFLVGVLGNAL
.:: :.: . . ::: ... . : : : ..:..::::: :::.
NP_001 MGNDSVSYEYGDYSDLS----DRPVDCLDGACLAIDPLRVAPLPLYAAIFLVGVPGNAM
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 VVWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLIL
:.::.. :.: ..: :.:.:::::.: ::.:::: . :.. :::.:...: :::.::
NP_001 VAWVAGKVARRRVGATWLLHLAVADLLCCLSLPILAVPIARGGHWPYGAVGCRALPSIIL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 LNMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVV
:.::::.::::..::: .:.. : : .. . : . .::..:: ::::::.:: .:: .
NP_001 LTMYASVLLLAALSADLCFLALGPAWWSTVQRACGVQVACGAAWTLALLLTVPSAIYRRL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 REEYFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRATRS
..:.:: .. : :::. .. : ::. .:...::: ::.... :.. .: :. : :
NP_001 HQEHFPARLQCVVDYGGSSSTENAVTAIRFLFGFLGPLVAVASCHSALL--CWAARRCRP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 TKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINCCINP
: :.:..::. : ::.. :.... :.: . . . : :..: . :.::
NP_001 LGT-----AIVVGFFVCWAPYHLLGLVLTVAAPNSALLARALRAEPLIVGLALAHSCLNP
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 IIYVVAGQGFQGRLRKSLPSL----LRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
.... :.. .::.:::. ::. .. : .:: ... :. :
NP_001 MLFLYFGRA---QLRRSLPAACHWALRESQGQDESVDSKKSTSHDLVSEMEV
290 300 310 320 330
>>NP_001258679 (OMIM: 609949) C5a anaphylatoxin chemotac (337 aa)
initn: 769 init1: 601 opt: 774 Z-score: 780.9 bits: 152.9 E(85289): 9.4e-37
Smith-Waterman score: 797; 38.4% identity (68.9% similar) in 341 aa overlap (10-343:9-335)
10 20 30 40 50
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDIL---ALVIFAVVFLVGVLGNAL
.:: :.: . . ::: ... . : : : ..:..::::: :::.
NP_001 MGNDSVSYEYGDYSDLS----DRPVDCLDGACLAIDPLRVAPLPLYAAIFLVGVPGNAM
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 VVWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLIL
:.::.. :.: ..: :.:.:::::.: ::.:::: . :.. :::.:...: :::.::
NP_001 VAWVAGKVARRRVGATWLLHLAVADLLCCLSLPILAVPIARGGHWPYGAVGCRALPSIIL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 LNMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVV
:.::::.::::..::: .:.. : : .. . : . .::..:: ::::::.:: .:: .
NP_001 LTMYASVLLLAALSADLCFLALGPAWWSTVQRACGVQVACGAAWTLALLLTVPSAIYRRL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 REEYFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRATRS
..:.:: .. : :::. .. : ::. .:...::: ::.... :.. .: :. : :
NP_001 HQEHFPARLQCVVDYGGSSSTENAVTAIRFLFGFLGPLVAVASCHSALL--CWAARRCRP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 TKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINCCINP
: :.:..::. : ::.. :.... :.: . . . : :..: . :.::
NP_001 LGT-----AIVVGFFVCWAPYHLLGLVLTVAAPNSALLARALRAEPLIVGLALAHSCLNP
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 IIYVVAGQGFQGRLRKSLPSL----LRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
.... :.. .::.:::. ::. .. : .:: ... :. :
NP_001 MLFLYFGRA---QLRRSLPAACHWALRESQGQDESVDSKKSTSHDLVSEMEV
290 300 310 320 330
>>NP_001248383 (OMIM: 600239) G-protein coupled receptor (355 aa)
initn: 561 init1: 336 opt: 628 Z-score: 636.3 bits: 126.2 E(85289): 1.1e-28
Smith-Waterman score: 628; 31.2% identity (68.1% similar) in 317 aa overlap (16-327:18-331)
10 20 30 40 50
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLGNALV
: : .:.. ... . : : ..::.. ..:..:. :::.:
NP_001 MEDLEETLFEEFENYSYDLDYYSLESDLEEKVQ-LGVVHWVSLVLYCLAFVLGIPGNAIV
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 VWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILL
.: :.:. :.:....::::::.:::. : ::. .. .... ::::: :. :
NP_001 IWFTGFKWKKTVTTLWFLNLAIADFIFLLFLPLYISYVAMNFHWPFGIWLCKANSFTAQL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 NMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVR
::.::...:..:: :... ...:. . : . :. : :: :. :.. .: .
NP_001 NMFASVFFLTVISLDHYIHLIHPVLSHRHRTLKNSLIVIIFIWLLASLIGGPALYFRDTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 EEYFPPKVLCGVDYS-HDKR----RERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRR
: : ..:: ... :: :..... :....:.:.::::..::: ..... .:
NP_001 E--FNNHTLCYNNFQKHDPDLTLIRHHVLTWVKFIIGYLFPLLTMSICYLCLIFKVKKRS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 ATRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINC
:.. . ....::..: . : ::.. .: .. .: . ... : ...:..:
NP_001 ILISSRHFWTILVVVVAFVVCWTPYHLFSIWELTIHHNSYSHHVMQAGIPLSTGLAFLNS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE9 CINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
:.:::.::. .. ::.:.:.:. .:. .: : :
NP_001 CLNPILYVLISKKFQARFRSSVAEILKYTLWEVSCSGTVSEQLRNSETKNLCLLETAQ
300 310 320 330 340 350
>>XP_016859321 (OMIM: 600239) PREDICTED: G-protein coupl (355 aa)
initn: 561 init1: 336 opt: 628 Z-score: 636.3 bits: 126.2 E(85289): 1.1e-28
Smith-Waterman score: 628; 31.2% identity (68.1% similar) in 317 aa overlap (16-327:18-331)
10 20 30 40 50
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLGNALV
: : .:.. ... . : : ..::.. ..:..:. :::.:
XP_016 MEDLEETLFEEFENYSYDLDYYSLESDLEEKVQ-LGVVHWVSLVLYCLAFVLGIPGNAIV
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 VWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILL
.: :.:. :.:....::::::.:::. : ::. .. .... ::::: :. :
XP_016 IWFTGFKWKKTVTTLWFLNLAIADFIFLLFLPLYISYVAMNFHWPFGIWLCKANSFTAQL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 NMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVR
::.::...:..:: :... ...:. . : . :. : :: :. :.. .: .
XP_016 NMFASVFFLTVISLDHYIHLIHPVLSHRHRTLKNSLIVIIFIWLLASLIGGPALYFRDTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 EEYFPPKVLCGVDYS-HDKR----RERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRR
: : ..:: ... :: :..... :....:.:.::::..::: ..... .:
XP_016 E--FNNHTLCYNNFQKHDPDLTLIRHHVLTWVKFIIGYLFPLLTMSICYLCLIFKVKKRS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 ATRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINC
:.. . ....::..: . : ::.. .: .. .: . ... : ...:..:
XP_016 ILISSRHFWTILVVVVAFVVCWTPYHLFSIWELTIHHNSYSHHVMQAGIPLSTGLAFLNS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE9 CINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
:.:::.::. .. ::.:.:.:. .:. .: : :
XP_016 CLNPILYVLISKKFQARFRSSVAEILKYTLWEVSCSGTVSEQLRNSETKNLCLLETAQ
300 310 320 330 340 350
>>XP_005246528 (OMIM: 600239) PREDICTED: G-protein coupl (355 aa)
initn: 561 init1: 336 opt: 628 Z-score: 636.3 bits: 126.2 E(85289): 1.1e-28
Smith-Waterman score: 628; 31.2% identity (68.1% similar) in 317 aa overlap (16-327:18-331)
10 20 30 40 50
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLGNALV
: : .:.. ... . : : ..::.. ..:..:. :::.:
XP_005 MEDLEETLFEEFENYSYDLDYYSLESDLEEKVQ-LGVVHWVSLVLYCLAFVLGIPGNAIV
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 VWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILL
.: :.:. :.:....::::::.:::. : ::. .. .... ::::: :. :
XP_005 IWFTGFKWKKTVTTLWFLNLAIADFIFLLFLPLYISYVAMNFHWPFGIWLCKANSFTAQL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 NMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVR
::.::...:..:: :... ...:. . : . :. : :: :. :.. .: .
XP_005 NMFASVFFLTVISLDHYIHLIHPVLSHRHRTLKNSLIVIIFIWLLASLIGGPALYFRDTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 EEYFPPKVLCGVDYS-HDKR----RERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRR
: : ..:: ... :: :..... :....:.:.::::..::: ..... .:
XP_005 E--FNNHTLCYNNFQKHDPDLTLIRHHVLTWVKFIIGYLFPLLTMSICYLCLIFKVKKRS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 ATRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINC
:.. . ....::..: . : ::.. .: .. .: . ... : ...:..:
XP_005 ILISSRHFWTILVVVVAFVVCWTPYHLFSIWELTIHHNSYSHHVMQAGIPLSTGLAFLNS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE9 CINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
:.:::.::. .. ::.:.:.:. .:. .: : :
XP_005 CLNPILYVLISKKFQARFRSSVAEILKYTLWEVSCSGTVSEQLRNSETKNLCLLETAQ
300 310 320 330 340 350
>>NP_001248381 (OMIM: 600239) G-protein coupled receptor (355 aa)
initn: 561 init1: 336 opt: 628 Z-score: 636.3 bits: 126.2 E(85289): 1.1e-28
Smith-Waterman score: 628; 31.2% identity (68.1% similar) in 317 aa overlap (16-327:18-331)
10 20 30 40 50
pF1KE9 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLGNALV
: : .:.. ... . : : ..::.. ..:..:. :::.:
NP_001 MEDLEETLFEEFENYSYDLDYYSLESDLEEKVQ-LGVVHWVSLVLYCLAFVLGIPGNAIV
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 VWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILL
.: :.:. :.:....::::::.:::. : ::. .. .... ::::: :. :
NP_001 IWFTGFKWKKTVTTLWFLNLAIADFIFLLFLPLYISYVAMNFHWPFGIWLCKANSFTAQL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 NMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVR
::.::...:..:: :... ...:. . : . :. : :: :. :.. .: .
NP_001 NMFASVFFLTVISLDHYIHLIHPVLSHRHRTLKNSLIVIIFIWLLASLIGGPALYFRDTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 EEYFPPKVLCGVDYS-HDKR----RERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRR
: : ..:: ... :: :..... :....:.:.::::..::: ..... .:
NP_001 E--FNNHTLCYNNFQKHDPDLTLIRHHVLTWVKFIIGYLFPLLTMSICYLCLIFKVKKRS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 ATRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLNKLDSLCVSFAYINC
:.. . ....::..: . : ::.. .: .. .: . ... : ...:..:
NP_001 ILISSRHFWTILVVVVAFVVCWTPYHLFSIWELTIHHNSYSHHVMQAGIPLSTGLAFLNS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE9 CINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
:.:::.::. .. ::.:.:.:. .:. .: : :
NP_001 CLNPILYVLISKKFQARFRSSVAEILKYTLWEVSCSGTVSEQLRNSETKNLCLLETAQ
300 310 320 330 340 350
350 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 17:31:39 2016 done: Mon Nov 7 17:31:40 2016
Total Scan time: 7.700 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]