Result of FASTA (omim) for
pFN21AE9550
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9550, 398 aa
1>>>pF1KE9550 398 - 398 aa - 398 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8029+/-0.000314; mu= 17.1725+/- 0.020
mean_var=126.8275+/-27.635, 0's: 0 Z-trim(120.0): 639 B-trim: 3247 in 2/54
Lambda= 0.113885
statistics sampled from 33978 (34717) to 33978 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.407), width: 16
Scan time: 9.780
The best scores are: opt bits E(85289)
NP_115940 (OMIM: 176400,604161,614837) kiSS-1 rece ( 398) 2721 457.9 1.9e-128
XP_016882871 (OMIM: 176400,604161,614837) PREDICTE ( 226) 1172 203.2 5.3e-52
NP_004239 (OMIM: 600895) prolactin-releasing pepti ( 370) 543 100.1 9.5e-21
NP_003605 (OMIM: 603692) galanin receptor type 3 [ ( 368) 529 97.8 4.7e-20
XP_005261778 (OMIM: 182453) PREDICTED: somatostati ( 418) 524 97.0 9e-20
XP_016884412 (OMIM: 182453) PREDICTED: somatostati ( 418) 524 97.0 9e-20
NP_001042 (OMIM: 182453) somatostatin receptor typ ( 418) 524 97.0 9e-20
XP_006724374 (OMIM: 182453) PREDICTED: somatostati ( 418) 524 97.0 9e-20
XP_011528651 (OMIM: 182453) PREDICTED: somatostati ( 418) 524 97.0 9e-20
NP_001265616 (OMIM: 182453) somatostatin receptor ( 418) 524 97.0 9e-20
XP_016884413 (OMIM: 182453) PREDICTED: somatostati ( 418) 524 97.0 9e-20
NP_003848 (OMIM: 603691) galanin receptor type 2 [ ( 387) 516 95.6 2.1e-19
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 511 94.8 3.8e-19
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 496 92.3 2e-18
XP_016881180 (OMIM: 600377) PREDICTED: galanin rec ( 269) 494 91.8 2.1e-18
NP_001471 (OMIM: 600377) galanin receptor type 1 [ ( 349) 489 91.2 4.3e-18
NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 473 88.6 2.9e-17
NP_000901 (OMIM: 162642) neuropeptide Y receptor t ( 381) 462 86.8 9.9e-17
XP_005263090 (OMIM: 162642) PREDICTED: neuropeptid ( 381) 462 86.8 9.9e-17
XP_005263091 (OMIM: 162642) PREDICTED: neuropeptid ( 381) 462 86.8 9.9e-17
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 455 85.6 2.1e-16
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 455 85.6 2.1e-16
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 455 85.6 2.1e-16
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 455 85.6 2.1e-16
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 455 85.6 2.2e-16
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 455 85.6 2.2e-16
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 455 85.6 2.2e-16
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 455 85.6 2.3e-16
NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 451 85.0 3.6e-16
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 450 84.8 3.9e-16
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 450 84.8 3.9e-16
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 450 84.8 3.9e-16
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 450 84.8 4e-16
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 450 84.8 4e-16
NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 450 84.8 4e-16
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 450 84.8 4.1e-16
NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 450 84.8 4.1e-16
NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 450 84.8 4.1e-16
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 450 84.8 4.1e-16
NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 450 84.9 4.3e-16
NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 450 84.9 4.6e-16
NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 450 84.9 4.6e-16
NP_937822 (OMIM: 606925) pyroglutamylated RFamide ( 431) 439 83.0 1.5e-15
NP_071429 (OMIM: 607448) neuropeptide FF receptor ( 430) 435 82.4 2.3e-15
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 433 82.0 2.6e-15
NP_005276 (OMIM: 600730) neuropeptides B/W recepto ( 328) 430 81.4 3.4e-15
NP_001049 (OMIM: 162323) substance-P receptor isof ( 407) 418 79.6 1.5e-14
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 415 79.0 2e-14
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 415 79.0 2e-14
NP_001718 (OMIM: 300107) bombesin receptor subtype ( 399) 414 78.9 2.4e-14
>>NP_115940 (OMIM: 176400,604161,614837) kiSS-1 receptor (398 aa)
initn: 2721 init1: 2721 opt: 2721 Z-score: 2427.1 bits: 457.9 E(85289): 1.9e-128
Smith-Waterman score: 2721; 99.7% identity (99.7% similar) in 398 aa overlap (1-398:1-398)
10 20 30 40 50 60
pF1KE9 MHTVATSGPNASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALMLLGLVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MHTVATSGPNASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALMLLGLVGN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 SLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDFMCKFVNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDFMCKFVNY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 IQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAVSAPVLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 IQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAVSAPVLAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 HRLSPGPRAYCSEAFPSRALERAFALYNLLALYLLPLLATCACYAAMLRHLGRVAVRPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 HRLSPGPRAYCSEAFPSRALERAFALYNLLALYLLPLLATCACYAAMLRHLGRVAVRPAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 ADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPAGSWHPRSYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 ADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPAGSWHPRSYA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 AYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRRPGPSDPAAPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 AYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRRPGPSDPAAPH
310 320 330 340 350 360
370 380 390
pF1KE9 AELHRLGSHPAPARAQKPGSSGLAARGLCVLGEDNAPL
::: ::::::::::::::::::::::::::::::::::
NP_115 AELLRLGSHPAPARAQKPGSSGLAARGLCVLGEDNAPL
370 380 390
>>XP_016882871 (OMIM: 176400,604161,614837) PREDICTED: k (226 aa)
initn: 1211 init1: 1172 opt: 1172 Z-score: 1054.5 bits: 203.2 E(85289): 5.3e-52
Smith-Waterman score: 1172; 98.8% identity (100.0% similar) in 172 aa overlap (1-172:1-172)
10 20 30 40 50 60
pF1KE9 MHTVATSGPNASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALMLLGLVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHTVATSGPNASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALMLLGLVGN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 SLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDFMCKFVNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDFMCKFVNY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 IQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAVSAPVLAL
:::::::::::::::::::::::::::::::::::::::::::::::::..:
XP_016 IQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGAGAGRARRRRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 HRLSPGPRAYCSEAFPSRALERAFALYNLLALYLLPLLATCACYAAMLRHLGRVAVRPAP
XP_016 GQGLAAGGGRGPALRRLLGPHPAVPGAAGAGPRGLLAPTQLRRLRA
190 200 210 220
>>NP_004239 (OMIM: 600895) prolactin-releasing peptide r (370 aa)
initn: 512 init1: 165 opt: 543 Z-score: 493.5 bits: 100.1 E(85289): 9.5e-21
Smith-Waterman score: 544; 34.6% identity (62.6% similar) in 353 aa overlap (7-344:16-356)
10 20 30 40
pF1KE9 MHTVATSGPNASWGAPANASG--CPGCGANA-SDGPVPSP----RAVDAW-
:: . .::: :. : :. : .:.:. .: . :
NP_004 MASSTTRGPRVSDLFSGLPPAVTTPANQSAEASAGNGSVAGADAPAVTPFQSLQLVHQLK
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE9 -LVPLFFAALMLLGLVGNSLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFT-AL
:. :........::::: :.. :: : . ...:::: :.::: .:: . :::.: :
NP_004 GLIVLLYSVVVVVGLVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCTACVPLTLAY
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE9 LYPLPGWVLGDFMCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALA
. :::.: .:..: ..: :.: .. :::...:::. : : ::: .: . ::.
NP_004 AFEPRGWVFGGGLCHLVFFLQPVTVYVSVFTLTTIAVDRYVVLVHPLR--RRISLRLSAY
130 140 150 160 170
170 180 190 200 210
pF1KE9 VSLSIWVGSAAVSAPVLALH----RLSPGPRAYCSEAFPSRALERA-FALYNLLALYLLP
. :.::. ::... :. :.: .:.: : : . :. .: .: ::. ::::
NP_004 AVLAIWALSAVLALPA-AVHTYHVELKPHDVRLCEEFWGSQERQRQLYAWGLLLVTYLLP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE9 LLATCACYAAMLRHLGRVAVRPAPADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACW
::. :. . .: : : :. . :.:. .:: : .. :...::..::.::
NP_004 LLVILLSYVRVSVKL-RNRVVPG---CVTQSQADWDRA--RRRRTFCLLVVVVVVFAVCW
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE9 GPIQLFLVLQALGPAGSWHPRSYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRR
:...: .:. : : . : :: .. : ...:.. ::..::.: . ::. .:.
NP_004 LPLHVFNLLRDLDPH-AIDP--YAFGLVQLLCHWLAMSSACYNPFIYAWLHDSFREELRK
300 310 320 330 340
340 350 360 370 380 390
pF1KE9 VCPCAPRRPRRPRRPGPSDPAAPHAELHRLGSHPAPARAQKPGSSGLAARGLCVLGEDNA
. ::.
NP_004 LLVAWPRKIAPHGQNMTVSVVI
350 360 370
>>NP_003605 (OMIM: 603692) galanin receptor type 3 [Homo (368 aa)
initn: 648 init1: 312 opt: 529 Z-score: 481.0 bits: 97.8 E(85289): 4.7e-20
Smith-Waterman score: 687; 36.9% identity (60.2% similar) in 382 aa overlap (27-387:2-366)
10 20 30 40 50 60
pF1KE9 MHTVATSGPNASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALMLLGLVGN
:.:.. . :: .: : ::. :: ..::: :::
NP_003 MADAQNISLDSPGSVGAVAVPVVFALIFLLGTVGN
10 20 30
70 80 90 100 110
pF1KE9 SLVIYVICRHKPMR-----TVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDFMC
.::. :. . : ..:...: :::..:. :.:::::: : .: : .:..: ..:
NP_003 GLVLAVLLQPGPSAWQEPGSTTDLFILNLAVADLCFILCCVPFQATIYTLDAWLFGALVC
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE9 KFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAVSA
: :. . ... :. ::.:.::::. .. :::. :::: : :. .:. .: ::
NP_003 KAVHLLIYLTMYASSFTLAAVSVDRYLAVRHPLRSRALRTPRNARAAVGLVWLLAALFSA
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE9 PVLALH-RLSPGPRAYCSEAFPSRALERAFALYNLLALYLLPLLATCACYAAMLRHLGRV
: :. . . : : :. . : .::. . .. : ::::. .. :. :: : .
NP_003 PYLSYYGTVRYGALELCVPAWED-ARRRALDVATFAAGYLLPVAVVSLAYGRTLRFLW-A
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE9 AVRPAPADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPAGSW
:: :: : .: . . ::: : . ::. :.: :::: . ... :
NP_003 AVGPAGAAAAEARRRATGRAG-------RAMLAVAALYALCWGPHHALILC-------FW
220 230 240 250
300 310 320 330 340 350
pF1KE9 HPR---SYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRR-
. : : :.:: . .::..:.:: ::::.::. . ::: :::. ::. :: .: ::
NP_003 YGRFAFSPATYACRLASHCLAYANSCLNPLVYALASRHFRARFRRLWPCGRRRRHRARRA
260 270 280 290 300 310
360 370 380 390
pF1KE9 -----PGPSDP------AAPHAELHRLGSHPAPARAQKPGSSGLAARGLCVLGEDNAPL
:. : : : : ..: :.. .: . : .: ::::
NP_003 LRRVRPASSGPPGCPGDARPSGRLLAGGGQ-GPEPREGPVHGGEAARGPE
320 330 340 350 360
>>XP_005261778 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 550 init1: 203 opt: 524 Z-score: 476.0 bits: 97.0 E(85289): 9e-20
Smith-Waterman score: 624; 35.1% identity (59.3% similar) in 393 aa overlap (6-382:12-384)
10 20 30 40 50
pF1KE9 MHTVATSGP-NASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALM
:: : ::: . : .:. .:.: :: :. ::.. :.:: . ..
XP_005 MDMLHPSSVSTTSEPENASSAWPPDATL-----GNVSAGPSPAGLAVSGVLIPLVYLVVC
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 LLGLVGNSLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDF
..::.::::::::. :: .::: :: ::: .: :.: .:: : : : .:..
XP_005 VVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLG-LPFLAAQNALSYWPFGSL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 MCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAV
::..: .. .. .. ::.:::::. ..: : :. . :: .: .:: ..::.::.:
XP_005 MCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 SAPVLALHRLSPGPRAYCSEAFPSRALE-RA-FALYNLLALYLLPLLATCACYAAMLRHL
::... . : . : .: : :: : .:. .. :::. : :: .. ..
XP_005 VLPVVVFSGV-PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 GRVAVRPAPADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPA
: : : . : : : . .:: .:.:.:.::: ::. :: :. .. ..... :
XP_005 -RSAGRRVWAPSC-QRRRRSER------RVTRMVVAVVALFVLCWMPFYVLNIVNVVCPL
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 GSWHPRSYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRRP
:. : ..: . . :.:: ::.::.::. .:.:.:::: : : : ..:
XP_005 ----PEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEP
290 300 310 320 330 340
360 370 380 390
pF1KE9 --GPS------DPAAPHAELHRLGSHPAP-----ARAQKPGSSGLAARGLCVLGEDNAPL
:: : .: : :.. .. .::.::
XP_005 TVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLL
350 360 370 380 390 400
XP_005 PQEASTGEKSSTMRISYL
410
>>XP_016884412 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 550 init1: 203 opt: 524 Z-score: 476.0 bits: 97.0 E(85289): 9e-20
Smith-Waterman score: 624; 35.1% identity (59.3% similar) in 393 aa overlap (6-382:12-384)
10 20 30 40 50
pF1KE9 MHTVATSGP-NASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALM
:: : ::: . : .:. .:.: :: :. ::.. :.:: . ..
XP_016 MDMLHPSSVSTTSEPENASSAWPPDATL-----GNVSAGPSPAGLAVSGVLIPLVYLVVC
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 LLGLVGNSLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDF
..::.::::::::. :: .::: :: ::: .: :.: .:: : : : .:..
XP_016 VVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLG-LPFLAAQNALSYWPFGSL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 MCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAV
::..: .. .. .. ::.:::::. ..: : :. . :: .: .:: ..::.::.:
XP_016 MCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 SAPVLALHRLSPGPRAYCSEAFPSRALE-RA-FALYNLLALYLLPLLATCACYAAMLRHL
::... . : . : .: : :: : .:. .. :::. : :: .. ..
XP_016 VLPVVVFSGV-PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 GRVAVRPAPADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPA
: : : . : : : . .:: .:.:.:.::: ::. :: :. .. ..... :
XP_016 -RSAGRRVWAPSC-QRRRRSER------RVTRMVVAVVALFVLCWMPFYVLNIVNVVCPL
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 GSWHPRSYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRRP
:. : ..: . . :.:: ::.::.::. .:.:.:::: : : : ..:
XP_016 ----PEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEP
290 300 310 320 330 340
360 370 380 390
pF1KE9 --GPS------DPAAPHAELHRLGSHPAP-----ARAQKPGSSGLAARGLCVLGEDNAPL
:: : .: : :.. .. .::.::
XP_016 TVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLL
350 360 370 380 390 400
XP_016 PQEASTGEKSSTMRISYL
410
>>NP_001042 (OMIM: 182453) somatostatin receptor type 3 (418 aa)
initn: 550 init1: 203 opt: 524 Z-score: 476.0 bits: 97.0 E(85289): 9e-20
Smith-Waterman score: 624; 35.1% identity (59.3% similar) in 393 aa overlap (6-382:12-384)
10 20 30 40 50
pF1KE9 MHTVATSGP-NASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALM
:: : ::: . : .:. .:.: :: :. ::.. :.:: . ..
NP_001 MDMLHPSSVSTTSEPENASSAWPPDATL-----GNVSAGPSPAGLAVSGVLIPLVYLVVC
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 LLGLVGNSLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDF
..::.::::::::. :: .::: :: ::: .: :.: .:: : : : .:..
NP_001 VVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLG-LPFLAAQNALSYWPFGSL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 MCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAV
::..: .. .. .. ::.:::::. ..: : :. . :: .: .:: ..::.::.:
NP_001 MCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 SAPVLALHRLSPGPRAYCSEAFPSRALE-RA-FALYNLLALYLLPLLATCACYAAMLRHL
::... . : . : .: : :: : .:. .. :::. : :: .. ..
NP_001 VLPVVVFSGV-PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 GRVAVRPAPADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPA
: : : . : : : . .:: .:.:.:.::: ::. :: :. .. ..... :
NP_001 -RSAGRRVWAPSC-QRRRRSER------RVTRMVVAVVALFVLCWMPFYVLNIVNVVCPL
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 GSWHPRSYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRRP
:. : ..: . . :.:: ::.::.::. .:.:.:::: : : : ..:
NP_001 ----PEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEP
290 300 310 320 330 340
360 370 380 390
pF1KE9 --GPS------DPAAPHAELHRLGSHPAP-----ARAQKPGSSGLAARGLCVLGEDNAPL
:: : .: : :.. .. .::.::
NP_001 TVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLL
350 360 370 380 390 400
NP_001 PQEASTGEKSSTMRISYL
410
>>XP_006724374 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 550 init1: 203 opt: 524 Z-score: 476.0 bits: 97.0 E(85289): 9e-20
Smith-Waterman score: 624; 35.1% identity (59.3% similar) in 393 aa overlap (6-382:12-384)
10 20 30 40 50
pF1KE9 MHTVATSGP-NASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALM
:: : ::: . : .:. .:.: :: :. ::.. :.:: . ..
XP_006 MDMLHPSSVSTTSEPENASSAWPPDATL-----GNVSAGPSPAGLAVSGVLIPLVYLVVC
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 LLGLVGNSLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDF
..::.::::::::. :: .::: :: ::: .: :.: .:: : : : .:..
XP_006 VVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLG-LPFLAAQNALSYWPFGSL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 MCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAV
::..: .. .. .. ::.:::::. ..: : :. . :: .: .:: ..::.::.:
XP_006 MCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 SAPVLALHRLSPGPRAYCSEAFPSRALE-RA-FALYNLLALYLLPLLATCACYAAMLRHL
::... . : . : .: : :: : .:. .. :::. : :: .. ..
XP_006 VLPVVVFSGV-PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 GRVAVRPAPADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPA
: : : . : : : . .:: .:.:.:.::: ::. :: :. .. ..... :
XP_006 -RSAGRRVWAPSC-QRRRRSER------RVTRMVVAVVALFVLCWMPFYVLNIVNVVCPL
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 GSWHPRSYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRRP
:. : ..: . . :.:: ::.::.::. .:.:.:::: : : : ..:
XP_006 ----PEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEP
290 300 310 320 330 340
360 370 380 390
pF1KE9 --GPS------DPAAPHAELHRLGSHPAP-----ARAQKPGSSGLAARGLCVLGEDNAPL
:: : .: : :.. .. .::.::
XP_006 TVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLL
350 360 370 380 390 400
XP_006 PQEASTGEKSSTMRISYL
410
>>XP_011528651 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 550 init1: 203 opt: 524 Z-score: 476.0 bits: 97.0 E(85289): 9e-20
Smith-Waterman score: 624; 35.1% identity (59.3% similar) in 393 aa overlap (6-382:12-384)
10 20 30 40 50
pF1KE9 MHTVATSGP-NASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALM
:: : ::: . : .:. .:.: :: :. ::.. :.:: . ..
XP_011 MDMLHPSSVSTTSEPENASSAWPPDATL-----GNVSAGPSPAGLAVSGVLIPLVYLVVC
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 LLGLVGNSLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDF
..::.::::::::. :: .::: :: ::: .: :.: .:: : : : .:..
XP_011 VVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLG-LPFLAAQNALSYWPFGSL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 MCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAV
::..: .. .. .. ::.:::::. ..: : :. . :: .: .:: ..::.::.:
XP_011 MCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 SAPVLALHRLSPGPRAYCSEAFPSRALE-RA-FALYNLLALYLLPLLATCACYAAMLRHL
::... . : . : .: : :: : .:. .. :::. : :: .. ..
XP_011 VLPVVVFSGV-PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 GRVAVRPAPADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPA
: : : . : : : . .:: .:.:.:.::: ::. :: :. .. ..... :
XP_011 -RSAGRRVWAPSC-QRRRRSER------RVTRMVVAVVALFVLCWMPFYVLNIVNVVCPL
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 GSWHPRSYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRRP
:. : ..: . . :.:: ::.::.::. .:.:.:::: : : : ..:
XP_011 ----PEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEP
290 300 310 320 330 340
360 370 380 390
pF1KE9 --GPS------DPAAPHAELHRLGSHPAP-----ARAQKPGSSGLAARGLCVLGEDNAPL
:: : .: : :.. .. .::.::
XP_011 TVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLL
350 360 370 380 390 400
XP_011 PQEASTGEKSSTMRISYL
410
>>NP_001265616 (OMIM: 182453) somatostatin receptor type (418 aa)
initn: 550 init1: 203 opt: 524 Z-score: 476.0 bits: 97.0 E(85289): 9e-20
Smith-Waterman score: 624; 35.1% identity (59.3% similar) in 393 aa overlap (6-382:12-384)
10 20 30 40 50
pF1KE9 MHTVATSGP-NASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALM
:: : ::: . : .:. .:.: :: :. ::.. :.:: . ..
NP_001 MDMLHPSSVSTTSEPENASSAWPPDATL-----GNVSAGPSPAGLAVSGVLIPLVYLVVC
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 LLGLVGNSLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDF
..::.::::::::. :: .::: :: ::: .: :.: .:: : : : .:..
NP_001 VVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLG-LPFLAAQNALSYWPFGSL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 MCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAV
::..: .. .. .. ::.:::::. ..: : :. . :: .: .:: ..::.::.:
NP_001 MCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 SAPVLALHRLSPGPRAYCSEAFPSRALE-RA-FALYNLLALYLLPLLATCACYAAMLRHL
::... . : . : .: : :: : .:. .. :::. : :: .. ..
NP_001 VLPVVVFSGV-PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 GRVAVRPAPADSALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQALGPA
: : : . : : : . .:: .:.:.:.::: ::. :: :. .. ..... :
NP_001 -RSAGRRVWAPSC-QRRRRSER------RVTRMVVAVVALFVLCWMPFYVLNIVNVVCPL
240 250 260 270 280
300 310 320 330 340 350
pF1KE9 GSWHPRSYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAFRRVCPCAPRRPRRPRRP
:. : ..: . . :.:: ::.::.::. .:.:.:::: : : : ..:
NP_001 ----PEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEP
290 300 310 320 330 340
360 370 380 390
pF1KE9 --GPS------DPAAPHAELHRLGSHPAP-----ARAQKPGSSGLAARGLCVLGEDNAPL
:: : .: : :.. .. .::.::
NP_001 TVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLL
350 360 370 380 390 400
NP_001 PQEASTGEKSSTMRISYL
410
398 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:36:50 2016 done: Sun Nov 6 13:36:52 2016
Total Scan time: 9.780 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]