Result of FASTA (omim) for
pFN21AE9464
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9464, 373 aa
1>>>pF1KE9464 373 - 373 aa - 373 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7112+/-0.000351; mu= 19.6309+/- 0.022
mean_var=57.2335+/-11.721, 0's: 0 Z-trim(113.7): 19 B-trim: 0 in 0/52
Lambda= 0.169531
statistics sampled from 23167 (23184) to 23167 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.272), width: 16
Scan time: 8.730
The best scores are: opt bits E(85289)
XP_011510724 (OMIM: 608336) PREDICTED: transmembra ( 373) 2416 599.1 5.4e-171
XP_006713559 (OMIM: 608336) PREDICTED: transmembra ( 373) 2416 599.1 5.4e-171
XP_006713558 (OMIM: 608336) PREDICTED: transmembra ( 373) 2416 599.1 5.4e-171
XP_016861196 (OMIM: 608336) PREDICTED: transmembra ( 373) 2416 599.1 5.4e-171
XP_016861197 (OMIM: 608336) PREDICTED: transmembra ( 373) 2416 599.1 5.4e-171
XP_006713560 (OMIM: 608336) PREDICTED: transmembra ( 373) 2416 599.1 5.4e-171
NP_001129525 (OMIM: 608336) transmembrane protein ( 373) 2416 599.1 5.4e-171
NP_001136118 (OMIM: 608336) transmembrane protein ( 293) 1298 325.6 9.2e-89
XP_016861199 (OMIM: 608336) PREDICTED: transmembra ( 336) 1119 281.8 1.5e-75
XP_016861198 (OMIM: 608336) PREDICTED: transmembra ( 351) 1040 262.5 1.1e-69
>>XP_011510724 (OMIM: 608336) PREDICTED: transmembrane p (373 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 3190.9 bits: 599.1 E(85289): 5.4e-171
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
310 320 330 340 350 360
370
pF1KE9 NSTDSERWKAINA
:::::::::::::
XP_011 NSTDSERWKAINA
370
>>XP_006713559 (OMIM: 608336) PREDICTED: transmembrane p (373 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 3190.9 bits: 599.1 E(85289): 5.4e-171
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
310 320 330 340 350 360
370
pF1KE9 NSTDSERWKAINA
:::::::::::::
XP_006 NSTDSERWKAINA
370
>>XP_006713558 (OMIM: 608336) PREDICTED: transmembrane p (373 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 3190.9 bits: 599.1 E(85289): 5.4e-171
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
310 320 330 340 350 360
370
pF1KE9 NSTDSERWKAINA
:::::::::::::
XP_006 NSTDSERWKAINA
370
>>XP_016861196 (OMIM: 608336) PREDICTED: transmembrane p (373 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 3190.9 bits: 599.1 E(85289): 5.4e-171
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
310 320 330 340 350 360
370
pF1KE9 NSTDSERWKAINA
:::::::::::::
XP_016 NSTDSERWKAINA
370
>>XP_016861197 (OMIM: 608336) PREDICTED: transmembrane p (373 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 3190.9 bits: 599.1 E(85289): 5.4e-171
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
310 320 330 340 350 360
370
pF1KE9 NSTDSERWKAINA
:::::::::::::
XP_016 NSTDSERWKAINA
370
>>XP_006713560 (OMIM: 608336) PREDICTED: transmembrane p (373 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 3190.9 bits: 599.1 E(85289): 5.4e-171
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
310 320 330 340 350 360
370
pF1KE9 NSTDSERWKAINA
:::::::::::::
XP_006 NSTDSERWKAINA
370
>>NP_001129525 (OMIM: 608336) transmembrane protein adip (373 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 3190.9 bits: 599.1 E(85289): 5.4e-171
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
310 320 330 340 350 360
370
pF1KE9 NSTDSERWKAINA
:::::::::::::
NP_001 NSTDSERWKAINA
370
>>NP_001136118 (OMIM: 608336) transmembrane protein adip (293 aa)
initn: 1320 init1: 1298 opt: 1298 Z-score: 1714.6 bits: 325.6 E(85289): 9.2e-89
Smith-Waterman score: 1298; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
:::::::::::::::::::::::.
NP_001 EDFNIYGHGGRQFWLVSSCFFFLLCRCHNLPVLQLLRSAHLRGFPPGLLRLGAQDPLLLQ
190 200 210 220 230 240
>>XP_016861199 (OMIM: 608336) PREDICTED: transmembrane p (336 aa)
initn: 2137 init1: 1119 opt: 1119 Z-score: 1477.1 bits: 281.8 E(85289): 1.5e-75
Smith-Waterman score: 2067; 90.1% identity (90.1% similar) in 373 aa overlap (1-373:1-336)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQ--------------
130 140 150 160
190 200 210 220 230 240
pF1KE9 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
:::::::::::::::::::::::::::::::::::::
XP_016 -----------------------VYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
170 180 190 200
250 260 270 280 290 300
pF1KE9 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE9 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
270 280 290 300 310 320
370
pF1KE9 NSTDSERWKAINA
:::::::::::::
XP_016 NSTDSERWKAINA
330
>>XP_016861198 (OMIM: 608336) PREDICTED: transmembrane p (351 aa)
initn: 1054 init1: 1032 opt: 1040 Z-score: 1372.4 bits: 262.5 E(85289): 1.1e-69
Smith-Waterman score: 1040; 83.5% identity (88.2% similar) in 212 aa overlap (1-211:1-208)
10 20 30 40 50 60
pF1KE9 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
70 80 90 100 110 120
130 140 150 160 170
pF1KE9 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQG-TLEILYPDAHLS
:::::::::::::::::::::::::::::::::::::::::::::: : : :: .:
XP_016 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQPKTGPAL--DAAIS
130 140 150 160 170
180 190 200 210 220 230
pF1KE9 AEDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLN
. . :: : :: .. . .: ...
XP_016 WAGHGQGADWGRGPW--RSCTLMPISQLRTLISMAMGAASSGWSAPASSSCSEELLRVCG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 LLQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVD
XP_016 HPGTAQPTAGAGECAAVLRHHRGALLCRCHNLPVLQLLRSAHLRGFPPGLLRLGAQDPLL
240 250 260 270 280 290
373 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:41:52 2016 done: Sun Nov 6 17:41:53 2016
Total Scan time: 8.730 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]