Result of FASTA (omim) for
pFN21AE9409
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9409, 361 aa
1>>>pF1KE9409 361 - 361 aa - 361 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4162+/-0.000307; mu= 22.1917+/- 0.019
mean_var=96.4247+/-22.166, 0's: 0 Z-trim(117.6): 637 B-trim: 1695 in 1/56
Lambda= 0.130611
statistics sampled from 28972 (29731) to 28972 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.349), width: 16
Scan time: 8.150
The best scores are: opt bits E(85289)
NP_005289 (OMIM: 602174) probable G-protein couple ( 361) 2456 473.1 4.4e-133
NP_005281 (OMIM: 601166) G-protein coupled recepto ( 360) 615 126.1 1.2e-28
NP_000676 (OMIM: 106165,145500,267430) type-1 angi ( 359) 570 117.7 4.2e-26
NP_033611 (OMIM: 106165,145500,267430) type-1 angi ( 359) 570 117.7 4.2e-26
NP_114438 (OMIM: 106165,145500,267430) type-1 angi ( 388) 570 117.7 4.4e-26
NP_114038 (OMIM: 106165,145500,267430) type-1 angi ( 394) 570 117.7 4.4e-26
NP_004826 (OMIM: 106165,145500,267430) type-1 angi ( 394) 570 117.7 4.4e-26
NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 540 112.0 2.1e-24
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 540 112.0 2.2e-24
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 540 112.1 2.3e-24
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 540 112.1 2.3e-24
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 501 104.7 3.4e-22
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 501 104.7 3.4e-22
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 499 104.3 4.4e-22
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 498 104.1 5.1e-22
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 498 104.1 5.1e-22
NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 498 104.1 5.1e-22
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 498 104.1 5.1e-22
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 498 104.1 5.1e-22
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 498 104.1 5.1e-22
NP_002556 (OMIM: 300038) P2Y purinoceptor 4 [Homo ( 365) 485 101.7 2.8e-21
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 483 101.3 3.6e-21
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 483 101.3 3.6e-21
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 482 101.1 4.2e-21
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 482 101.1 4.2e-21
NP_001707 (OMIM: 601613) C-X-C chemokine receptor ( 372) 482 101.1 4.2e-21
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 482 101.1 4.2e-21
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 482 101.1 4.2e-21
XP_011535835 (OMIM: 300034) PREDICTED: type-2 angi ( 363) 468 98.5 2.6e-20
NP_000677 (OMIM: 300034) type-2 angiotensin II rec ( 363) 468 98.5 2.6e-20
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 464 97.7 4.4e-20
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 464 97.7 4.4e-20
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 460 96.9 6.8e-20
NP_003941 (OMIM: 602779) proteinase-activated rece ( 385) 459 96.8 8.6e-20
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 456 96.2 1.2e-19
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 456 96.2 1.2e-19
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 456 96.2 1.2e-19
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 456 96.2 1.2e-19
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 456 96.2 1.3e-19
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 456 96.2 1.3e-19
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 456 96.2 1.3e-19
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 456 96.2 1.3e-19
XP_016860005 (OMIM: 610376) PREDICTED: atypical ch ( 362) 453 95.6 1.8e-19
XP_005246154 (OMIM: 610376) PREDICTED: atypical ch ( 362) 453 95.6 1.8e-19
XP_005246155 (OMIM: 610376) PREDICTED: atypical ch ( 362) 453 95.6 1.8e-19
NP_064707 (OMIM: 610376) atypical chemokine recept ( 362) 453 95.6 1.8e-19
NP_003848 (OMIM: 603691) galanin receptor type 2 [ ( 387) 453 95.7 1.9e-19
NP_116743 (OMIM: 601613) C-X-C chemokine receptor ( 327) 451 95.2 2.2e-19
NP_871001 (OMIM: 609043) relaxin-3 receptor 2 [Hom ( 374) 447 94.5 4.1e-19
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 444 93.9 5.8e-19
>>NP_005289 (OMIM: 602174) probable G-protein coupled re (361 aa)
initn: 2456 init1: 2456 opt: 2456 Z-score: 2510.3 bits: 473.1 E(85289): 4.4e-133
Smith-Waterman score: 2456; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361)
10 20 30 40 50 60
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELELCPAGDLPYGYVYIPALYLAAFAVGLLGNAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAPTEPWSPSPGSAPWDYSGLDGLEELELCPAGDLPYGYVYIPALYLAAFAVGLLGNAFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFALA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 GTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYRGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 QPLPGGQDSQCGEEPSHAFQGLSLLLLLLTFVLPLVVTLFCYCRISRRLRRPPHVGRARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QPLPGGQDSQCGEEPSHAFQGLSLLLLLLTFVLPLVVTLFCYCRISRRLRRPPHVGRARR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 NSLRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTIATCLAFVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NSLRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTIATCLAFVNS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 CANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRDDSSVFRCRAQAANTASAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRDDSSVFRCRAQAANTASAS
310 320 330 340 350 360
pF1KE9 W
:
NP_005 W
>>NP_005281 (OMIM: 601166) G-protein coupled receptor 15 (360 aa)
initn: 610 init1: 399 opt: 615 Z-score: 635.4 bits: 126.1 E(85289): 1.2e-28
Smith-Waterman score: 615; 36.3% identity (65.4% similar) in 295 aa overlap (35-323:29-318)
10 20 30 40 50 60
pF1KE9 EPWSPSPGSAPWDYSGLDGLEELELCPAGDLPYGYVYIPALYLAAFAVGLLGNAFVVWLL
.:: :..:..: :.: .:.::: .. :
NP_005 MDPEETSVYLDYYYATSPNSDIRETHSHVPYTSVFLPVFYTAVFLTGVLGNLVLMGAL
10 20 30 40 50
70 80 90 100 110 120
pF1KE9 AGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFALAGTRC
. : :::.: :...:::.:. :..:::::. : : : :. ::: ::. .. .
NP_005 HFKPGSRRLIDIFIINLAASDFIFLVTLPLWVDKEASLGLWRTGSFLCKGSSYMISVNMH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE9 AGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYRGLQPLP
..:::. ::::::::.: . .: .: :: . : ..: .. : :::.:. : : .
NP_005 CSVLLLTCMSVDRYLAIVWPVVSRKFRRTDCAYVVCASIWFISCLLGLPTLLSRELTLID
120 130 140 150 160 170
190 200 210 220 230
pF1KE9 GGQDSQCGEEPSHAFQGL-SLLLLLLTFVLPLVVTLFCYCRISRRL----RRPPHVGRAR
. :.:. . .. . ::. :..:: .::. . ::: :.:.: .. . ..
NP_005 --DKPYCAEKKATPIKLIWSLVALIFTFFVPLLSIVTCYCCIARKLCAHYQQSGKHNKKL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 RNSLRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLA-LRWGLTIATCLAFV
..:..::: . ..:. :::::.... :: ...: : : :. :. .. :::.
NP_005 KKSIKIIFIVVAAFLVSWLPFNTFK---FLAIVSGLRQEHYLPSAILQLGMEVSGPLAFA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE9 NSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRDDSSVFRCRAQAANTAS
:::.::.:: ..: .: . :
NP_005 NSCVNPFIYYIFDSYIRRAIVHCLCPCLKNYDFGSSTETSDSHLTKALSTFIHAEDFARR
300 310 320 330 340 350
>>NP_000676 (OMIM: 106165,145500,267430) type-1 angioten (359 aa)
initn: 463 init1: 392 opt: 570 Z-score: 589.6 bits: 117.7 E(85289): 4.2e-26
Smith-Waterman score: 570; 34.0% identity (67.0% similar) in 303 aa overlap (22-315:9-310)
10 20 30 40 50
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELEL-CP-AGDLPYGYVYIPALYLAAFAVGLLGNA
::..... :: :: : .:.::.:: :.::..::.
NP_000 MILNSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNS
10 20 30 40
60 70 80 90 100 110
pF1KE9 FVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFA
.:: .. . ....:.:.:: ::: :.:::::::. .:. :::::. :::..: .
NP_000 LVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASAS
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE9 LAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYR
.. . :...::. .:.:::::.:. ...: :: : ..: .: .: ::.::....:
NP_000 VSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE9 GLQPLPGGQDSQCG---EEPSHAFQ-GLSLLLLLLTFVLPLVVTLFCYCRISRRLRRPPH
.. . . . . :. : . .. ::.: .: :..:... : : : . :.. .
NP_000 NVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE9 VGRAR-RNS--LRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTI
. . . ::. ..::.:: : ::.: . . . : .:: . : . . .. :
NP_000 IQKNKPRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIR-DCRIADIVDTAMPI
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE9 ATCLAFVNSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRDDSSVFRCRA
. :.:. :.: :::.: .: ..:.
NP_000 TICIAYFNNCLNPLFYGFLGKKFKRYFLQLLKYIPPKAKSHSNLSTKMSTLSYRPSDNVS
290 300 310 320 330 340
>>NP_033611 (OMIM: 106165,145500,267430) type-1 angioten (359 aa)
initn: 463 init1: 392 opt: 570 Z-score: 589.6 bits: 117.7 E(85289): 4.2e-26
Smith-Waterman score: 570; 34.0% identity (67.0% similar) in 303 aa overlap (22-315:9-310)
10 20 30 40 50
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELEL-CP-AGDLPYGYVYIPALYLAAFAVGLLGNA
::..... :: :: : .:.::.:: :.::..::.
NP_033 MILNSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNS
10 20 30 40
60 70 80 90 100 110
pF1KE9 FVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFA
.:: .. . ....:.:.:: ::: :.:::::::. .:. :::::. :::..: .
NP_033 LVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASAS
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE9 LAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYR
.. . :...::. .:.:::::.:. ...: :: : ..: .: .: ::.::....:
NP_033 VSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE9 GLQPLPGGQDSQCG---EEPSHAFQ-GLSLLLLLLTFVLPLVVTLFCYCRISRRLRRPPH
.. . . . . :. : . .. ::.: .: :..:... : : : . :.. .
NP_033 NVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE9 VGRAR-RNS--LRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTI
. . . ::. ..::.:: : ::.: . . . : .:: . : . . .. :
NP_033 IQKNKPRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIR-DCRIADIVDTAMPI
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE9 ATCLAFVNSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRDDSSVFRCRA
. :.:. :.: :::.: .: ..:.
NP_033 TICIAYFNNCLNPLFYGFLGKKFKRYFLQLLKYIPPKAKSHSNLSTKMSTLSYRPSDNVS
290 300 310 320 330 340
>>NP_114438 (OMIM: 106165,145500,267430) type-1 angioten (388 aa)
initn: 463 init1: 392 opt: 570 Z-score: 589.3 bits: 117.7 E(85289): 4.4e-26
Smith-Waterman score: 570; 34.0% identity (67.0% similar) in 303 aa overlap (22-315:38-339)
10 20 30 40
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELEL-CP-AGDLPYGYVYIPALYLAA
::..... :: :: : .:.::.::
NP_114 CGCTTFGVFDIVFATNSTQVIKMILNSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSII
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE9 FAVGLLGNAFVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGD
:.::..::..:: .. . ....:.:.:: ::: :.:::::::. .:. :::::.
NP_114 FVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGN
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE9 GLCKLSSFALAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALL
:::..: ... . :...::. .:.:::::.:. ...: :: : ..: .: .: :
NP_114 YLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE9 AGLPSLVYRGLQPLPGGQDSQCG---EEPSHAFQ-GLSLLLLLLTFVLPLVVTLFCYCRI
:.::....:.. . . . . :. : . .. ::.: .: :..:... : : :
NP_114 ASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLI
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE9 SRRLRRPPHVGRAR-RNS--LRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLL
. :.. .. . . ::. ..::.:: : ::.: . . . : .:: . : .
NP_114 WKALKKAYEIQKNKPRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIR-DCRIA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE9 LALRWGLTIATCLAFVNSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRD
. .. :. :.:. :.: :::.: .: ..:.
NP_114 DIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRYFLQLLKYIPPKAKSHSNLSTKMSTL
310 320 330 340 350 360
350 360
pF1KE9 DSSVFRCRAQAANTASASW
NP_114 SYRPSDNVSSSTKKPAPCFEVE
370 380
>>NP_114038 (OMIM: 106165,145500,267430) type-1 angioten (394 aa)
initn: 463 init1: 392 opt: 570 Z-score: 589.2 bits: 117.7 E(85289): 4.4e-26
Smith-Waterman score: 570; 34.0% identity (67.0% similar) in 303 aa overlap (22-315:44-345)
10 20 30 40
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELEL-CP-AGDLPYGYVYIPALYLAA
::..... :: :: : .:.::.::
NP_114 APQLRGGVFDIVFATNSTQVIKMILNSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSII
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE9 FAVGLLGNAFVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGD
:.::..::..:: .. . ....:.:.:: ::: :.:::::::. .:. :::::.
NP_114 FVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGN
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE9 GLCKLSSFALAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALL
:::..: ... . :...::. .:.:::::.:. ...: :: : ..: .: .: :
NP_114 YLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGL
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE9 AGLPSLVYRGLQPLPGGQDSQCG---EEPSHAFQ-GLSLLLLLLTFVLPLVVTLFCYCRI
:.::....:.. . . . . :. : . .. ::.: .: :..:... : : :
NP_114 ASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLI
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE9 SRRLRRPPHVGRAR-RNS--LRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLL
. :.. .. . . ::. ..::.:: : ::.: . . . : .:: . : .
NP_114 WKALKKAYEIQKNKPRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIR-DCRIA
260 270 280 290 300 310
290 300 310 320 330 340
pF1KE9 LALRWGLTIATCLAFVNSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRD
. .. :. :.:. :.: :::.: .: ..:.
NP_114 DIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRYFLQLLKYIPPKAKSHSNLSTKMSTL
320 330 340 350 360 370
350 360
pF1KE9 DSSVFRCRAQAANTASASW
NP_114 SYRPSDNVSSSTKKPAPCFEVE
380 390
>>NP_004826 (OMIM: 106165,145500,267430) type-1 angioten (394 aa)
initn: 463 init1: 392 opt: 570 Z-score: 589.2 bits: 117.7 E(85289): 4.4e-26
Smith-Waterman score: 570; 34.0% identity (67.0% similar) in 303 aa overlap (22-315:44-345)
10 20 30 40
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELEL-CP-AGDLPYGYVYIPALYLAA
::..... :: :: : .:.::.::
NP_004 APQLRGGVFDIVFATNSTQVIKMILNSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSII
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE9 FAVGLLGNAFVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGD
:.::..::..:: .. . ....:.:.:: ::: :.:::::::. .:. :::::.
NP_004 FVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGN
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE9 GLCKLSSFALAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALL
:::..: ... . :...::. .:.:::::.:. ...: :: : ..: .: .: :
NP_004 YLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGL
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE9 AGLPSLVYRGLQPLPGGQDSQCG---EEPSHAFQ-GLSLLLLLLTFVLPLVVTLFCYCRI
:.::....:.. . . . . :. : . .. ::.: .: :..:... : : :
NP_004 ASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLI
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE9 SRRLRRPPHVGRAR-RNS--LRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLL
. :.. .. . . ::. ..::.:: : ::.: . . . : .:: . : .
NP_004 WKALKKAYEIQKNKPRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIR-DCRIA
260 270 280 290 300 310
290 300 310 320 330 340
pF1KE9 LALRWGLTIATCLAFVNSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRD
. .. :. :.:. :.: :::.: .: ..:.
NP_004 DIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRYFLQLLKYIPPKAKSHSNLSTKMSTL
320 330 340 350 360 370
350 360
pF1KE9 DSSVFRCRAQAANTASASW
NP_004 SYRPSDNVSSSTKKPAPCFEVE
380 390
>>NP_001495 (OMIM: 300574) C-X-C chemokine receptor type (368 aa)
initn: 472 init1: 199 opt: 540 Z-score: 559.0 bits: 112.0 E(85289): 2.1e-24
Smith-Waterman score: 540; 34.5% identity (59.0% similar) in 322 aa overlap (30-345:43-356)
10 20 30 40 50
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELELCPAG-DLPYGYVYIPALYLAAFAVGLLGNA
:: .: . ...:::: : .:::::.
NP_001 DAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNG
20 30 40 50 60 70
60 70 80 90 100 110
pF1KE9 FVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFA
:. .: .:: .:::.::::.:: .::::::::. ::. .: ::.::::...
NP_001 AVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAV--QWVFGSGLCKVAGAL
80 90 100 110 120 130
120 130 140 150 160 170
pF1KE9 LAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYR
. . ::::::: .: :::: .:. . : . .: .::.. :: .::....
NP_001 FNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFL
140 150 160 170 180 190
180 190 200 210 220 230
pF1KE9 GLQPLPGGQDSQCGEE-PSHAFQGLSLLLLLLTFVLPLVVTLFCYCRISRRLRRPPHVGR
. . . ..: . :. . .: .: :. :.:::.: .:: .: : :.
NP_001 SAHHDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSR--GQ
200 210 220 230 240
240 250 260 270 280 290
pF1KE9 ARRNSLRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTIATCLAF
: ..:.. .. .:. : :. . : : :::: : . . .... :..
NP_001 RRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGY
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE9 VNSCANPLIYLLLDRSFRARA----LDGACGRTGRLARRISSASSLSRDDSSVFRCRAQA
.. : :::.: .. .:: : : .: : :. :: :: :::
NP_001 MHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSS----SRRDSSWSETSEAS
310 320 330 340 350 360
360
pF1KE9 ANTASASW
NP_001 YSGL
>>XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemokine (378 aa)
initn: 472 init1: 199 opt: 540 Z-score: 558.8 bits: 112.0 E(85289): 2.2e-24
Smith-Waterman score: 540; 34.5% identity (59.0% similar) in 322 aa overlap (30-345:53-366)
10 20 30 40 50
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELELCPAG-DLPYGYVYIPALYLAAFAVGLLGNA
:: .: . ...:::: : .:::::.
XP_005 DAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNG
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE9 FVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFA
:. .: .:: .:::.::::.:: .::::::::. ::. .: ::.::::...
XP_005 AVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAV--QWVFGSGLCKVAGAL
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE9 LAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYR
. . ::::::: .: :::: .:. . : . .: .::.. :: .::....
XP_005 FNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFL
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE9 GLQPLPGGQDSQCGEE-PSHAFQGLSLLLLLLTFVLPLVVTLFCYCRISRRLRRPPHVGR
. . . ..: . :. . .: .: :. :.:::.: .:: .: : :.
XP_005 SAHHDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSR--GQ
210 220 230 240 250
240 250 260 270 280 290
pF1KE9 ARRNSLRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTIATCLAF
: ..:.. .. .:. : :. . : : :::: : . . .... :..
XP_005 RRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGY
260 270 280 290 300 310
300 310 320 330 340 350
pF1KE9 VNSCANPLIYLLLDRSFRARA----LDGACGRTGRLARRISSASSLSRDDSSVFRCRAQA
.. : :::.: .. .:: : : .: : :. :: :: :::
XP_005 MHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSS----SRRDSSWSETSEAS
320 330 340 350 360 370
360
pF1KE9 ANTASASW
XP_005 YSGL
>>NP_001136269 (OMIM: 300574) C-X-C chemokine receptor t (415 aa)
initn: 472 init1: 199 opt: 540 Z-score: 558.4 bits: 112.1 E(85289): 2.3e-24
Smith-Waterman score: 540; 34.5% identity (59.0% similar) in 322 aa overlap (30-345:90-403)
10 20 30 40 50
pF1KE9 MAPTEPWSPSPGSAPWDYSGLDGLEELELCPAG-DLPYGYVYIPALYLAAFAVGLLGNA
:: .: . ...:::: : .:::::.
NP_001 DAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNG
60 70 80 90 100 110
60 70 80 90 100 110
pF1KE9 FVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFA
:. .: .:: .:::.::::.:: .::::::::. ::. .: ::.::::...
NP_001 AVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAV--QWVFGSGLCKVAGAL
120 130 140 150 160 170
120 130 140 150 160 170
pF1KE9 LAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYR
. . ::::::: .: :::: .:. . : . .: .::.. :: .::....
NP_001 FNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFL
180 190 200 210 220 230
180 190 200 210 220 230
pF1KE9 GLQPLPGGQDSQCGEE-PSHAFQGLSLLLLLLTFVLPLVVTLFCYCRISRRLRRPPHVGR
. . . ..: . :. . .: .: :. :.:::.: .:: .: : :.
NP_001 SAHHDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSR--GQ
240 250 260 270 280 290
240 250 260 270 280 290
pF1KE9 ARRNSLRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTIATCLAF
: ..:.. .. .:. : :. . : : :::: : . . .... :..
NP_001 RRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGY
300 310 320 330 340 350
300 310 320 330 340 350
pF1KE9 VNSCANPLIYLLLDRSFRARA----LDGACGRTGRLARRISSASSLSRDDSSVFRCRAQA
.. : :::.: .. .:: : : .: : :. :: :: :::
NP_001 MHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSS----SRRDSSWSETSEAS
360 370 380 390 400 410
360
pF1KE9 ANTASASW
NP_001 YSGL
361 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:44:15 2016 done: Sun Nov 6 18:44:16 2016
Total Scan time: 8.150 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]