Result of FASTA (omim) for
pFN21AE6781
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6781, 567 aa
1>>>pF1KE6781 567 - 567 aa - 567 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6002+/-0.000402; mu= 12.0721+/- 0.025
mean_var=101.3605+/-21.101, 0's: 0 Z-trim(115.0): 133 B-trim: 1119 in 1/53
Lambda= 0.127391
statistics sampled from 25062 (25224) to 25062 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.296), width: 16
Scan time: 7.750
The best scores are: opt bits E(85289)
NP_004572 (OMIM: 601905) geranylgeranyl transferas ( 567) 3831 715.1 1.5e-205
NP_878256 (OMIM: 601905) geranylgeranyl transferas ( 567) 3831 715.1 1.5e-205
NP_002018 (OMIM: 134635) protein farnesyltransfera ( 379) 193 46.4 0.0002
NP_001263223 (OMIM: 615507) nischarin isoform 3 [H ( 515) 185 45.0 0.00073
NP_001263222 (OMIM: 615507) nischarin isoform 2 [H ( 583) 185 45.0 0.00081
XP_011542154 (OMIM: 605352) PREDICTED: malignant f (1003) 183 44.7 0.0017
NP_004216 (OMIM: 605352) malignant fibrous histioc (1052) 183 44.7 0.0017
NP_009115 (OMIM: 615507) nischarin isoform 1 [Homo (1504) 185 45.2 0.0018
NP_665894 (OMIM: 605247) p53-induced protein with ( 893) 179 44.0 0.0025
XP_011518513 (OMIM: 605247) PREDICTED: p53-induced ( 893) 179 44.0 0.0025
NP_665893 (OMIM: 605247) p53-induced protein with ( 910) 179 44.0 0.0025
XP_011518512 (OMIM: 605247) PREDICTED: p53-induced ( 910) 179 44.0 0.0025
XP_011518511 (OMIM: 605247) PREDICTED: p53-induced ( 920) 179 44.0 0.0026
XP_005253063 (OMIM: 605247) PREDICTED: p53-induced ( 934) 179 44.0 0.0026
XP_005253064 (OMIM: 605247) PREDICTED: p53-induced ( 934) 179 44.0 0.0026
XP_005253062 (OMIM: 605247) PREDICTED: p53-induced ( 934) 179 44.0 0.0026
XP_011518514 (OMIM: 605247) PREDICTED: p53-induced ( 788) 176 43.4 0.0033
XP_005253065 (OMIM: 605247) PREDICTED: p53-induced ( 788) 176 43.4 0.0033
NP_612490 (OMIM: 616236) chondroadherin-like prote ( 762) 173 42.8 0.0047
XP_005261427 (OMIM: 616236) PREDICTED: chondroadhe ( 771) 173 42.8 0.0047
XP_011528236 (OMIM: 616236) PREDICTED: chondroadhe ( 825) 173 42.9 0.005
XP_011528235 (OMIM: 616236) PREDICTED: chondroadhe ( 830) 173 42.9 0.005
XP_011528234 (OMIM: 616236) PREDICTED: chondroadhe ( 839) 173 42.9 0.0051
XP_011538979 (OMIM: 608661) PREDICTED: podocan iso ( 402) 166 41.4 0.0067
XP_005270514 (OMIM: 608661) PREDICTED: podocan iso ( 613) 166 41.5 0.0095
NP_001186010 (OMIM: 608661) podocan isoform 2 [Hom ( 642) 166 41.5 0.0099
NP_001186009 (OMIM: 608661) podocan isoform 2 [Hom ( 642) 166 41.5 0.0099
>>NP_004572 (OMIM: 601905) geranylgeranyl transferase ty (567 aa)
initn: 3831 init1: 3831 opt: 3831 Z-score: 3811.1 bits: 715.1 E(85289): 1.5e-205
Smith-Waterman score: 3831; 100.0% identity (100.0% similar) in 567 aa overlap (1-567:1-567)
10 20 30 40 50 60
pF1KE6 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 PEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 WHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 WHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 PQDALRCLHVSRDEACLTVSFSRPLLVGSRMEILLLMVDDSPLIVEWRTPDGRNRPSHVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PQDALRCLHVSRDEACLTVSFSRPLLVGSRMEILLLMVDDSPLIVEWRTPDGRNRPSHVW
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 LCDLPAASLNDQLPQHTFRVIWTAGDVQKECVLLKGRQEGWCRDSTTDEQLFRCELSVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LCDLPAASLNDQLPQHTFRVIWTAGDVQKECVLLKGRQEGWCRDSTTDEQLFRCELSVEK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRAT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 YLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRTLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRTLPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 ALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLCNNRLQQPAVLQPLASCPRLVLLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLCNNRLQQPAVLQPLASCPRLVLLNL
490 500 510 520 530 540
550 560
pF1KE6 QGNPLCQAVGILEQLAELLPSVSSVLT
:::::::::::::::::::::::::::
NP_004 QGNPLCQAVGILEQLAELLPSVSSVLT
550 560
>>NP_878256 (OMIM: 601905) geranylgeranyl transferase ty (567 aa)
initn: 3831 init1: 3831 opt: 3831 Z-score: 3811.1 bits: 715.1 E(85289): 1.5e-205
Smith-Waterman score: 3831; 100.0% identity (100.0% similar) in 567 aa overlap (1-567:1-567)
10 20 30 40 50 60
pF1KE6 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 DFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 PEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 PEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 WHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 WHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 PQDALRCLHVSRDEACLTVSFSRPLLVGSRMEILLLMVDDSPLIVEWRTPDGRNRPSHVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 PQDALRCLHVSRDEACLTVSFSRPLLVGSRMEILLLMVDDSPLIVEWRTPDGRNRPSHVW
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 LCDLPAASLNDQLPQHTFRVIWTAGDVQKECVLLKGRQEGWCRDSTTDEQLFRCELSVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 LCDLPAASLNDQLPQHTFRVIWTAGDVQKECVLLKGRQEGWCRDSTTDEQLFRCELSVEK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRAT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 YLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRTLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 YLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRTLPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 ALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLCNNRLQQPAVLQPLASCPRLVLLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_878 ALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLCNNRLQQPAVLQPLASCPRLVLLNL
490 500 510 520 530 540
550 560
pF1KE6 QGNPLCQAVGILEQLAELLPSVSSVLT
:::::::::::::::::::::::::::
NP_878 QGNPLCQAVGILEQLAELLPSVSSVLT
550 560
>>NP_002018 (OMIM: 134635) protein farnesyltransferase/g (379 aa)
initn: 125 init1: 87 opt: 193 Z-score: 200.3 bits: 46.4 E(85289): 0.0002
Smith-Waterman score: 263; 27.0% identity (56.5% similar) in 248 aa overlap (33-280:104-325)
10 20 30 40 50 60
pF1KE6 GRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDF
.::.:. : .: ...:: . . :
NP_002 DIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQR---DERSERAFKLTRDAIELNAAN
80 90 100 110 120 130
70 80 90 100 110 120
pF1KE6 ATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRLPE
:.:. :: .:..: ::. .: :.... . .. .::.: .:::: :. : .
NP_002 YTVWHFRRVLLKSL--QKDLHE-------EMNYITAIIEEQPKNYQVWHHRRVLVEWLRD
140 150 160 170 180
130 140 150 160 170 180
pF1KE6 PNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWH
: ..:::. : .:. : .:.: :..:..: . . .:: ..:.:. .. : : :.
NP_002 P--SQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD-NELQYVDQLLKEDVRNNSVWN
190 200 210 220 230
190 200 210 220 230 240
pF1KE6 YRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRADPQ
: .. :. : . :: .:.. . . . :...::: : . .: .
NP_002 QRYFVI--------SNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS
240 250 260 270 280 290
250 260 270 280 290 300
pF1KE6 DALRCLHVSRDEACLTVSFSRPLLVGSRMEILLLMVDDSPLIVEWRTPDGRNRPSHVWLC
:. : : : : : :.. ..: :...
NP_002 KYPNLLNQLLD---LQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKE
300 310 320 330 340
310 320 330 340 350 360
pF1KE6 DLPAASLNDQLPQHTFRVIWTAGDVQKECVLLKGRQEGWCRDSTTDEQLFRCELSVEKST
NP_002 KDTIRKEYWRYIGRSLQSKHSTENDSPTNVQQ
350 360 370
>>NP_001263223 (OMIM: 615507) nischarin isoform 3 [Homo (515 aa)
initn: 179 init1: 147 opt: 185 Z-score: 190.3 bits: 45.0 E(85289): 0.00073
Smith-Waterman score: 201; 29.7% identity (56.3% similar) in 222 aa overlap (339-545:196-414)
310 320 330 340 350 360
pF1KE6 LNDQLPQHTFRVIWTAGDVQKECVLLKGRQEGWCRDSTTDEQLFRCELSVEKSTVLQSEL
:: :. .:::. .::. :: . : :.
NP_001 PTCASGDAKTDLGHILDFTCRLKYLKVSGTEGPFGTSNIQEQLLPFDLSIFKS-LHQVEI
170 180 190 200 210 220
370 380 390 400 410
pF1KE6 ESC--KELQELEPENKWCLLTI-----------ILLMRALDPLLYEKETLQYFQTLKAVD
: :... : .: : :. .:. .: . .: : . ::
NP_001 SHCDAKHIRGLVA-SKPTLATLSVRFSATSMKEVLVPEASEFDEWEPEGTTLEGPVTAVI
230 240 250 260 270 280
420 430 440 450 460 470
pF1KE6 PM-RATYLDDLRSKFLLE-NSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHN
: .: :: . . : . .:. ... : :.:. : :. .:..: ..:::::.:
NP_001 PTWQALTTLDLSHNSISEIDESVKL-IPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYN
290 300 310 320 330 340
480 490 500 510 520 530
pF1KE6 RLRTLPPALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLCNNRLQQPAVLQPLASCP
.: .: . : ...:. . : .:::.:. .: : .: : .::..: .. ..: :
NP_001 KLSSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGSLP
350 360 370 380 390 400
540 550 560
pF1KE6 RLVLLNLQGNPLCQAVGILEQLAELLPSVSSVLT
: ..: .:::
NP_001 CLEHVSLLNNPLSIIPDYRTKVLAQFGERASEVCLDDTVTTEKELDTVEVLKAIQKAKEV
410 420 430 440 450 460
>>NP_001263222 (OMIM: 615507) nischarin isoform 2 [Homo (583 aa)
initn: 179 init1: 147 opt: 185 Z-score: 189.5 bits: 45.0 E(85289): 0.00081
Smith-Waterman score: 201; 29.7% identity (56.3% similar) in 222 aa overlap (339-545:196-414)
310 320 330 340 350 360
pF1KE6 LNDQLPQHTFRVIWTAGDVQKECVLLKGRQEGWCRDSTTDEQLFRCELSVEKSTVLQSEL
:: :. .:::. .::. :: . : :.
NP_001 PTCASGDAKTDLGHILDFTCRLKYLKVSGTEGPFGTSNIQEQLLPFDLSIFKS-LHQVEI
170 180 190 200 210 220
370 380 390 400 410
pF1KE6 ESC--KELQELEPENKWCLLTI-----------ILLMRALDPLLYEKETLQYFQTLKAVD
: :... : .: : :. .:. .: . .: : . ::
NP_001 SHCDAKHIRGLVA-SKPTLATLSVRFSATSMKEVLVPEASEFDEWEPEGTTLEGPVTAVI
230 240 250 260 270 280
420 430 440 450 460 470
pF1KE6 PM-RATYLDDLRSKFLLE-NSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHN
: .: :: . . : . .:. ... : :.:. : :. .:..: ..:::::.:
NP_001 PTWQALTTLDLSHNSISEIDESVKL-IPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYN
290 300 310 320 330 340
480 490 500 510 520 530
pF1KE6 RLRTLPPALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLCNNRLQQPAVLQPLASCP
.: .: . : ...:. . : .:::.:. .: : .: : .::..: .. ..: :
NP_001 KLSSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGSLP
350 360 370 380 390 400
540 550 560
pF1KE6 RLVLLNLQGNPLCQAVGILEQLAELLPSVSSVLT
: ..: .:::
NP_001 CLEHVSLLNNPLSIIPDYRTKVLAQFGERASEVCLDDTVTTEKELDTVEVLKAIQKAKEV
410 420 430 440 450 460
>>XP_011542154 (OMIM: 605352) PREDICTED: malignant fibro (1003 aa)
initn: 242 init1: 104 opt: 183 Z-score: 184.0 bits: 44.7 E(85289): 0.0017
Smith-Waterman score: 183; 38.0% identity (62.8% similar) in 121 aa overlap (441-558:181-298)
420 430 440 450 460
pF1KE6 LKAVDPMRATYLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLC-HLEQLLLVTHLD
...:.: . :..::.. .: ::. . .::
XP_011 PAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELD
160 170 180 190 200 210
470 480 490 500 510 520
pF1KE6 LSHNRLRTLPPALAALRCLEVLQASDNAIESLD-GVTNLPRLQELLLCNNRLQQPAVLQP
.: :::: :: ..::: :..: : . .: : .: :. :.: :: :: .:
XP_011 VSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ---ALPA
220 230 240 250 260
530 540 550 560
pF1KE6 LASC-PRLVLLNLQGNPLCQAVGILEQLAELLPSVSSVLT
:: :: .:::..: . . . : :: :
XP_011 QFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLD
270 280 290 300 310 320
XP_011 NNRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMK
330 340 350 360 370 380
>>NP_004216 (OMIM: 605352) malignant fibrous histiocytom (1052 aa)
initn: 251 init1: 104 opt: 183 Z-score: 183.7 bits: 44.7 E(85289): 0.0017
Smith-Waterman score: 183; 38.0% identity (62.8% similar) in 121 aa overlap (441-558:181-298)
420 430 440 450 460
pF1KE6 LKAVDPMRATYLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLC-HLEQLLLVTHLD
...:.: . :..::.. .: ::. . .::
NP_004 PAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELD
160 170 180 190 200 210
470 480 490 500 510 520
pF1KE6 LSHNRLRTLPPALAALRCLEVLQASDNAIESLD-GVTNLPRLQELLLCNNRLQQPAVLQP
.: :::: :: ..::: :..: : . .: : .: :. :.: :: :: .:
NP_004 VSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ---ALPA
220 230 240 250 260
530 540 550 560
pF1KE6 LASC-PRLVLLNLQGNPLCQAVGILEQLAELLPSVSSVLT
:: :: .:::..: . . . : :: :
NP_004 QFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLD
270 280 290 300 310 320
NP_004 NNRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMK
330 340 350 360 370 380
>>NP_009115 (OMIM: 615507) nischarin isoform 1 [Homo sap (1504 aa)
initn: 179 init1: 147 opt: 185 Z-score: 183.3 bits: 45.2 E(85289): 0.0018
Smith-Waterman score: 201; 29.7% identity (56.3% similar) in 222 aa overlap (339-545:196-414)
310 320 330 340 350 360
pF1KE6 LNDQLPQHTFRVIWTAGDVQKECVLLKGRQEGWCRDSTTDEQLFRCELSVEKSTVLQSEL
:: :. .:::. .::. :: . : :.
NP_009 PTCASGDAKTDLGHILDFTCRLKYLKVSGTEGPFGTSNIQEQLLPFDLSIFKS-LHQVEI
170 180 190 200 210 220
370 380 390 400 410
pF1KE6 ESC--KELQELEPENKWCLLTI-----------ILLMRALDPLLYEKETLQYFQTLKAVD
: :... : .: : :. .:. .: . .: : . ::
NP_009 SHCDAKHIRGLVA-SKPTLATLSVRFSATSMKEVLVPEASEFDEWEPEGTTLEGPVTAVI
230 240 250 260 270 280
420 430 440 450 460 470
pF1KE6 PM-RATYLDDLRSKFLLE-NSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHN
: .: :: . . : . .:. ... : :.:. : :. .:..: ..:::::.:
NP_009 PTWQALTTLDLSHNSISEIDESVKL-IPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYN
290 300 310 320 330 340
480 490 500 510 520 530
pF1KE6 RLRTLPPALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLCNNRLQQPAVLQPLASCP
.: .: . : ...:. . : .:::.:. .: : .: : .::..: .. ..: :
NP_009 KLSSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGSLP
350 360 370 380 390 400
540 550 560
pF1KE6 RLVLLNLQGNPLCQAVGILEQLAELLPSVSSVLT
: ..: .:::
NP_009 CLEHVSLLNNPLSIIPDYRTKVLAQFGERASEVCLDDTVTTEKELDTVEVLKAIQKAKEV
410 420 430 440 450 460
>>NP_665894 (OMIM: 605247) p53-induced protein with a de (893 aa)
initn: 357 init1: 106 opt: 179 Z-score: 180.8 bits: 44.0 E(85289): 0.0025
Smith-Waterman score: 179; 39.4% identity (62.0% similar) in 142 aa overlap (421-558:129-265)
400 410 420 430 440
pF1KE6 LMRALDPLLYEKETLQYFQTLKAVDPMRATYLD-DLRSKFLLENSVLKMEYAEVRVLHLA
.:: .. : : ::.:. . .: :.
NP_665 GGQRRDTLGACLRGALTNLPAGLSGLAHLAHLDLSFNSLETLPACVLQMR--GLGALLLS
100 110 120 130 140 150
450 460 470 480 490 500
pF1KE6 HKDLTVLCH-LEQLLLVTHLDLSHNRLRTLPPALAALRCLEVLQASDNAIESLDG-VTNL
:. :. : . : : .: : ..::::.::::::.:: :. :. :.: ...: . .:
NP_665 HNCLSELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTLPPEIGGL
160 170 180 190 200 210
510 520 530 540 550 560
pF1KE6 PRLQELLLCNNRLQQ-PAVLQPLASCPRLVLLNLQGNPLCQAVGILEQLAELLPSVSSVL
: :: : .::::. :: : : : : :: :..: : .. . : .: :
NP_665 GSLLELNLASNRLQSLPASLAGLRS---LRLLVLHSNLLASVPADLARLPLLTRLDLRDN
220 230 240 250 260 270
pF1KE6 T
NP_665 QLRDLPPELLDAPFVRLQGNPLGEASPDAPSSPVAALIPEMPRLFLTSDLDSFPVTPQGC
280 290 300 310 320 330
>>XP_011518513 (OMIM: 605247) PREDICTED: p53-induced dea (893 aa)
initn: 357 init1: 106 opt: 179 Z-score: 180.8 bits: 44.0 E(85289): 0.0025
Smith-Waterman score: 179; 39.4% identity (62.0% similar) in 142 aa overlap (421-558:129-265)
400 410 420 430 440
pF1KE6 LMRALDPLLYEKETLQYFQTLKAVDPMRATYLD-DLRSKFLLENSVLKMEYAEVRVLHLA
.:: .. : : ::.:. . .: :.
XP_011 GGQRRDTLGACLRGALTNLPAGLSGLAHLAHLDLSFNSLETLPACVLQMR--GLGALLLS
100 110 120 130 140 150
450 460 470 480 490 500
pF1KE6 HKDLTVLCH-LEQLLLVTHLDLSHNRLRTLPPALAALRCLEVLQASDNAIESLDG-VTNL
:. :. : . : : .: : ..::::.::::::.:: :. :. :.: ...: . .:
XP_011 HNCLSELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTLPPEIGGL
160 170 180 190 200 210
510 520 530 540 550 560
pF1KE6 PRLQELLLCNNRLQQ-PAVLQPLASCPRLVLLNLQGNPLCQAVGILEQLAELLPSVSSVL
: :: : .::::. :: : : : : :: :..: : .. . : .: :
XP_011 GSLLELNLASNRLQSLPASLAGLRS---LRLLVLHSNLLASVPADLARLPLLTRLDLRDN
220 230 240 250 260 270
pF1KE6 T
XP_011 QLRDLPPELLDAPFVRLQGNPLGEASPDAPSSPVAALIPEMPRLFLTSDLDSFPVTPQGC
280 290 300 310 320 330
567 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:17:58 2016 done: Tue Nov 8 16:17:59 2016
Total Scan time: 7.750 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]