Result of FASTA (omim) for
pFN21AE6771
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6771, 563 aa
1>>>pF1KE6771 563 - 563 aa - 563 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5487+/-0.000421; mu= 16.7606+/- 0.026
mean_var=63.2680+/-12.677, 0's: 0 Z-trim(110.5): 13 B-trim: 104 in 1/49
Lambda= 0.161243
statistics sampled from 18875 (18882) to 18875 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.59), E-opt: 0.2 (0.221), width: 16
Scan time: 8.240
The best scores are: opt bits E(85289)
NP_071415 (OMIM: 210210,609014) methylcrotonoyl-Co ( 563) 3746 880.6 0
XP_011541831 (OMIM: 210210,609014) PREDICTED: meth ( 363) 2224 526.5 5.6e-149
XP_016865177 (OMIM: 210210,609014) PREDICTED: meth ( 365) 2224 526.5 5.6e-149
XP_005248624 (OMIM: 210210,609014) PREDICTED: meth ( 525) 2116 501.4 2.9e-141
NP_000523 (OMIM: 232050,606054) propionyl-CoA carb ( 539) 770 188.3 5.3e-47
NP_001171485 (OMIM: 232050,606054) propionyl-CoA c ( 559) 619 153.2 2e-36
XP_011511175 (OMIM: 232050,606054) PREDICTED: prop ( 387) 561 139.7 1.7e-32
>>NP_071415 (OMIM: 210210,609014) methylcrotonoyl-CoA ca (563 aa)
initn: 3746 init1: 3746 opt: 3746 Z-score: 4706.0 bits: 880.6 E(85289): 0
Smith-Waterman score: 3746; 100.0% identity (100.0% similar) in 563 aa overlap (1-563:1-563)
10 20 30 40 50 60
pF1KE6 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 QADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 QADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 DVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 DVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 RIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 RIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 DGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 DGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAAN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 VLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 VLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLV
490 500 510 520 530 540
550 560
pF1KE6 LGLSFSAALNAPIEKTDFGIFRM
:::::::::::::::::::::::
NP_071 LGLSFSAALNAPIEKTDFGIFRM
550 560
>>XP_011541831 (OMIM: 210210,609014) PREDICTED: methylcr (363 aa)
initn: 2224 init1: 2224 opt: 2224 Z-score: 2795.6 bits: 526.5 E(85289): 5.6e-149
Smith-Waterman score: 2224; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KE6 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 QADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 DVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFA
:::::::::::::::::::::::::::::::::
XP_011 DVTIEPSEEPLFPADELYGIVGANLKRSFDVREKFFMKYFLRLDLNSYNSTWQHGKEVKN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 RIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAK
XP_011 NSE
>>XP_016865177 (OMIM: 210210,609014) PREDICTED: methylcr (365 aa)
initn: 2224 init1: 2224 opt: 2224 Z-score: 2795.6 bits: 526.5 E(85289): 5.6e-149
Smith-Waterman score: 2224; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KE6 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 QADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 DVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFA
:::::::::::::::::::::::::::::::::
XP_016 DVTIEPSEEPLFPADELYGIVGANLKRSFDVREKFFMKYFLRLDLNSYNSTWQHALGKAQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 RIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAK
XP_016 DINLL
>>XP_005248624 (OMIM: 210210,609014) PREDICTED: methylcr (525 aa)
initn: 2101 init1: 2101 opt: 2116 Z-score: 2657.2 bits: 501.4 E(85289): 2.9e-141
Smith-Waterman score: 3411; 93.3% identity (93.3% similar) in 563 aa overlap (1-563:1-525)
10 20 30 40 50 60
pF1KE6 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 QADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIF
::::::::::::::::::::::::::::
XP_005 QADVFPDRDHFGRTFYNQAIMSSKNIAQ--------------------------------
190 200
250 260 270 280 290 300
pF1KE6 LAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ------VKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKL
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE6 DVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFA
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE6 RIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAK
330 340 350 360 370 380
430 440 450 460 470 480
pF1KE6 DGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAAN
390 400 410 420 430 440
490 500 510 520 530 540
pF1KE6 VLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLV
450 460 470 480 490 500
550 560
pF1KE6 LGLSFSAALNAPIEKTDFGIFRM
:::::::::::::::::::::::
XP_005 LGLSFSAALNAPIEKTDFGIFRM
510 520
>>NP_000523 (OMIM: 232050,606054) propionyl-CoA carboxyl (539 aa)
initn: 814 init1: 237 opt: 770 Z-score: 964.9 bits: 188.3 E(85289): 5.3e-47
Smith-Waterman score: 811; 31.9% identity (61.3% similar) in 530 aa overlap (28-538:7-512)
10 20 30 40 50 60
pF1KE6 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
::..:.. .. .. . ... . .....::.
NP_000 MAAALRVAAVGARLSVLASGLRAAVRSLCSQATSVNERI
10 20 30
70 80 90 100 110
pF1KE6 EHIK----LGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQF-----AGYQLY-D
:. . ::::.. . .:::: ::::. :.:::: :.: ..: : . . :
NP_000 ENKRRTALLGGGQRRIDAQHKRGKLTARERISLLLDPGS-FVESDMFVEHRCADFGMAAD
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE6 NEEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYL
... :: ...:: ::..: .....: :: ::. . ..: . .. :. : : :
NP_000 KNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVIGL
100 110 120 130 140 150
180 190 200 210 220
pF1KE6 VDSGGAYLPRQADVFPDR-DHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADE
::::: . . .. . : : :. . .: : ::...:: :..:..: ::..:
NP_000 NDSGGARIQEGVESLAGYADIFLRN-----VTASGVIPQISLIMGPCAGGAVYSPALTDF
160 170 180 190 200 210
230 240 250 260 270 280
pF1KE6 NIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRK
...:. . .:..:: .::..:.:.:. :.:::: : :::. . .: :: :
NP_000 TFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTMSGVAHRAFENDVDALCNLRD
220 230 240 250 260 270
290 300 310 320 330 340
pF1KE6 VVRNLNYQKKLDVTIEPSEEP---LFPADELYGIVGANLKRSFDVREVIARIVDGSRFTE
: ... . .. ..: : : :: :: . ..... ..: .:: .: :
NP_000 FFNYLPLSSQDPAPVRECHDPSDRLVP--ELDTIVPLESTKAYNMVDIIHSVVDEREFFE
280 290 300 310 320 330
350 360 370 380 390 400
pF1KE6 FKAFYGDTLVTGFARIFGYPVGIVGN-----NGVLFSESAKKGTHFVQLCCQRNIPLLFL
. :. ....::::. : :::::: .: : .:. ::..::..: ::::. .
NP_000 IMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPLITF
340 350 360 370 380 390
410 420 430 440 450 460
pF1KE6 QNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRF
.. ::. : : :: . :::.. : : : :::.:.: .::.. : ..
NP_000 VDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTVITRKAYGGAYDVMSSKHLCGDT
400 410 420 430 440 450
470 480 490 500 510 520
pF1KE6 LYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYY
: ::.:.:.:::.. :... : : .. :. : :.:: .::.
NP_000 NYAWPTAEIAVMGAKGAVEI---IFKGHENVEAAQ----------AEYIEKF---ANPFP
460 470 480 490
530 540 550 560
pF1KE6 SSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTDFGIFRM
...: . : ::.:..::
NP_000 AAVRGFVDDIIQPSSTRARICCDLDVLASKKVQRPWRKHANIPL
500 510 520 530
>>NP_001171485 (OMIM: 232050,606054) propionyl-CoA carbo (559 aa)
initn: 789 init1: 237 opt: 619 Z-score: 774.8 bits: 153.2 E(85289): 2e-36
Smith-Waterman score: 766; 30.9% identity (58.9% similar) in 550 aa overlap (28-538:7-532)
10 20 30 40 50 60
pF1KE6 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
::..:.. .. .. . ... . .....::.
NP_001 MAAALRVAAVGARLSVLASGLRAAVRSLCSQATSVNERI
10 20 30
70 80 90 100 110
pF1KE6 EHIK----LGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQF-----AGYQLY-D
:. . ::::.. . .:::: ::::. :.:::: :.: ..: : . . :
NP_001 ENKRRTALLGGGQRRIDAQHKRGKLTARERISLLLDPGS-FVESDMFVEHRCADFGMAAD
40 50 60 70 80 90
120 130 140 150
pF1KE6 NEEVPGGGIITGIGRVSG--------------------VECMIIANDATVKGGAYYPVTV
... :: ...:: ::..: . . :.: :: ::. . .
NP_001 KNKFPGDSVVTGRGRINGRLVYVFSQQIIGWAQWLPLVISALWEAEDFTVFGGSLSGAHA
100 110 120 130 140 150
160 170 180 190 200
pF1KE6 KKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDR-DHFGRTFYNQAIMSSKNIAQI
.: . .. :. : : : ::::: . . .. . : : :. . .: : ::
NP_001 QKICKIMDQAITVGAPVIGLNDSGGARIQEGVESLAGYADIFLRN-----VTASGVIPQI
160 170 180 190 200 210
210 220 230 240 250 260
pF1KE6 AVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRK
...:: :..:..: ::..: ...:. . .:..:: .::..:.:.:. :.:::: :
NP_001 SLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTM
220 230 240 250 260 270
270 280 290 300 310 320
pF1KE6 SGVSDHWALDDHHALHLTRKVVRNLNYQKKLDVTIEPSEEP---LFPADELYGIVGANLK
:::. . .: :: : : ... . .. ..: : : :: :: .
NP_001 SGVAHRAFENDVDALCNLRDFFNYLPLSSQDPAPVRECHDPSDRLVP--ELDTIVPLEST
280 290 300 310 320 330
330 340 350 360 370 380
pF1KE6 RSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYPVGIVGN-----NGVLFSESA
..... ..: .:: .: :. :. ....::::. : :::::: .: : .:.
NP_001 KAYNMVDIIHSVVDEREFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLDINSS
340 350 360 370 380 390
390 400 410 420 430 440
pF1KE6 KKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLII
::..::..: ::::. . .. ::. : : :: . :::.. : : : :::.:.:
NP_001 VKGARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTVIT
400 410 420 430 440 450
450 460 470 480 490 500
pF1KE6 GGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSAD
.::.. : .. : ::.:.:.:::.. :... : : .. :. :
NP_001 RKAYGGAYDVMSSKHLCGDTNYAWPTAEIAVMGAKGAVEI---IFKGHENVEAAQ-----
460 470 480 490 500
510 520 530 540 550 560
pF1KE6 EAALKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTDFGIF
:.:: .::. ...: . : ::.:..::
NP_001 -----AEYIEKF---ANPFPAAVRGFVDDIIQPSSTRARICCDLDVLASKKVQRPWRKHA
510 520 530 540 550
pF1KE6 RM
NP_001 NIPL
>>XP_011511175 (OMIM: 232050,606054) PREDICTED: propiony (387 aa)
initn: 541 init1: 215 opt: 561 Z-score: 704.4 bits: 139.7 E(85289): 1.7e-32
Smith-Waterman score: 561; 31.1% identity (62.7% similar) in 367 aa overlap (28-380:7-365)
10 20 30 40 50 60
pF1KE6 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV
::..:.. .. .. . ... . .....::.
XP_011 MAAALRVAAVGARLSVLASGLRAAVRSLCSQATSVNERI
10 20 30
70 80 90 100 110
pF1KE6 EHIK----LGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQF-----AGYQLY-D
:. . ::::.. . .:::: ::::. :.:::: :.: ..: : . . :
XP_011 ENKRRTALLGGGQRRIDAQHKRGKLTARERISLLLDPGS-FVESDMFVEHRCADFGMAAD
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE6 NEEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYL
... :: ...:: ::..: .....: :: ::. . ..: . .. :. : : :
XP_011 KNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVIGL
100 110 120 130 140 150
180 190 200 210 220
pF1KE6 VDSGGAYLPRQADVFPDR-DHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADE
::::: . . .. . : : :. . .: : ::...:: :..:..: ::..:
XP_011 NDSGGARIQEGVESLAGYADIFLRN-----VTASGVIPQISLIMGPCAGGAVYSPALTDF
160 170 180 190 200 210
230 240 250 260 270 280
pF1KE6 NIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRK
...:. . .:..:: .::..:.:.:. :.:::: : :::. . .: :: :
XP_011 TFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTMSGVAHRAFENDVDALCNLRD
220 230 240 250 260 270
290 300 310 320 330 340
pF1KE6 VVRNLNYQKKLDVTIEPSEEP---LFPADELYGIVGANLKRSFDVREVIARIVDGSRFTE
: ... . .. ..: : : :: :: . ..... ..: .:: .: :
XP_011 FFNYLPLSSQDPAPVRECHDPSDRLVP--ELDTIVPLESTKAYNMVDIIHSVVDEREFFE
280 290 300 310 320 330
350 360 370 380 390 400
pF1KE6 FKAFYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITG
. :. ....::::. : ::::::. . :.:
XP_011 IMPNYAKNIIVGFARMNGRTVGIVGNQPKVASDSISFTPWNYARRQYRPYFAGKEP
340 350 360 370 380
410 420 430 440 450 460
pF1KE6 FMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWP
563 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:13:28 2016 done: Tue Nov 8 16:13:30 2016
Total Scan time: 8.240 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]