Result of FASTA (omim) for
pFN21AE6680
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6680, 338 aa
1>>>pF1KE6680 338 - 338 aa - 338 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2127+/-0.000389; mu= 16.1907+/- 0.024
mean_var=60.0979+/-12.407, 0's: 0 Z-trim(110.5): 24 B-trim: 989 in 1/54
Lambda= 0.165442
statistics sampled from 18875 (18894) to 18875 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.222), width: 16
Scan time: 6.740
The best scores are: opt bits E(85289)
NP_001121100 (OMIM: 229700,611570) fructose-1,6-bi ( 338) 2214 537.1 2e-152
NP_000498 (OMIM: 229700,611570) fructose-1,6-bisph ( 338) 2214 537.1 2e-152
NP_003828 (OMIM: 603027) fructose-1,6-bisphosphata ( 339) 1738 423.5 3.1e-118
XP_006717068 (OMIM: 229700,611570) PREDICTED: fruc ( 256) 1704 415.4 6.8e-116
>>NP_001121100 (OMIM: 229700,611570) fructose-1,6-bispho (338 aa)
initn: 2214 init1: 2214 opt: 2214 Z-score: 2857.6 bits: 537.1 E(85289): 2e-152
Smith-Waterman score: 2214; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338)
10 20 30 40 50 60
pF1KE6 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK
250 260 270 280 290 300
310 320 330
pF1KE6 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ
::::::::::::::::::::::::::::::::::::::
NP_001 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ
310 320 330
>>NP_000498 (OMIM: 229700,611570) fructose-1,6-bisphosph (338 aa)
initn: 2214 init1: 2214 opt: 2214 Z-score: 2857.6 bits: 537.1 E(85289): 2e-152
Smith-Waterman score: 2214; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338)
10 20 30 40 50 60
pF1KE6 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK
250 260 270 280 290 300
310 320 330
pF1KE6 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ
::::::::::::::::::::::::::::::::::::::
NP_000 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ
310 320 330
>>NP_003828 (OMIM: 603027) fructose-1,6-bisphosphatase i (339 aa)
initn: 1744 init1: 1721 opt: 1738 Z-score: 2243.6 bits: 423.5 E(85289): 3.1e-118
Smith-Waterman score: 1738; 76.9% identity (92.9% similar) in 337 aa overlap (1-337:1-337)
10 20 30 40 50 60
pF1KE6 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI
:.:..::.::. ::::.:::.::.:.:::::::::::. ::.:::::::::::.::::::
NP_003 MTDRSPFETDMLTLTRYVMEKGRQAKGTGELTQLLNSMLTAIKAISSAVRKAGLAHLYGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP
:::.:::::.:::::::::.::.::..::..::::::::.: :::. ::::::::::::
NP_003 AGSVNVTGDEVKKLDVLSNSLVINMVQSSYSTCVLVSEENKDAIITAKEKRGKYVVCFDP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC
::::::::::.:.::::.:::: : :::::::::: :::.::::::::::::...:.
NP_003 LDGSSNIDCLASIGTIFAIYRKTSEDEPSEKDALQCGRNIVAAGYALYGSATLVALSTGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP
::. ::::::.:::.::.:::::::::::::::::::. :: :.:::.:.:::: :.:::
NP_003 GVDLFMLDPALGEFVLVEKDVKIKKKGKIYSLNEGYAKYFDAATTEYVQKKKFPEDGSAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK
::::::::::::::::::::::::::::.:::.:::::::::::.::..:.:::.::::
NP_003 YGARYVGSMVADVHRTLVYGGIFLYPANQKSPKGKLRLLYECNPVAYIIEQAGGLATTGT
250 260 270 280 290 300
310 320 330
pF1KE6 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ
. :::: : ::::.:.:::::.:: :.: .:..:
NP_003 QPVLDVKPEAIHQRVPLILGSPEDVQEYLTCVQKNQAGS
310 320 330
>>XP_006717068 (OMIM: 229700,611570) PREDICTED: fructose (256 aa)
initn: 1704 init1: 1704 opt: 1704 Z-score: 2201.6 bits: 415.4 E(85289): 6.8e-116
Smith-Waterman score: 1704; 100.0% identity (100.0% similar) in 256 aa overlap (83-338:1-256)
60 70 80 90 100 110
pF1KE6 GIAHLYGIAGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRG
::::::::::::::::::::::::::::::
XP_006 MNMLKSSFATCVLVSEEDKHAIIVEPEKRG
10 20 30
120 130 140 150 160 170
pF1KE6 KYVVCFDPLDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KYVVCFDPLDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSAT
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE6 MLVLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MLVLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKK
100 110 120 130 140 150
240 250 260 270 280 290
pF1KE6 FPPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FPPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKA
160 170 180 190 200 210
300 310 320 330
pF1KE6 GGMATTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ
::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GGMATTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ
220 230 240 250
338 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:21:34 2016 done: Tue Nov 8 15:21:35 2016
Total Scan time: 6.740 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]