FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6634, 216 aa
  1>>>pF1KE6634 216 - 216 aa - 216 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4617+/-0.000815; mu= 12.7370+/- 0.049
 mean_var=64.2352+/-12.720, 0's: 0 Z-trim(106.6): 27  B-trim: 0 in 0/49
 Lambda= 0.160025
 statistics sampled from 9050 (9071) to 9050 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.279), width:  16
 Scan time:  1.610

The best scores are:                                      opt bits E(32554)
CCDS9858.1 GSTZ1 gene_id:2954|Hs108|chr14          ( 216) 1428 338.1 2.5e-93
CCDS9860.1 GSTZ1 gene_id:2954|Hs108|chr14          ( 161) 1056 252.2 1.4e-67
CCDS9859.1 GSTZ1 gene_id:2954|Hs108|chr14          ( 174)  683 166.1 1.2e-41


>>CCDS9858.1 GSTZ1 gene_id:2954|Hs108|chr14               (216 aa)
 initn: 1428 init1: 1428 opt: 1428  Z-score: 1789.2  bits: 338.1 E(32554): 2.5e-93
Smith-Waterman score: 1428; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)

               10        20        30        40        50        60
pF1KE6 MQAGKPILYSYFRSSCSWRVRIALALKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 MQAGKPILYSYFRSSCSWRVRIALALKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 TLKIDGITIHQSLAIIEYLEEMRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 TLKIDGITIHQSLAIIEYLEEMRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 QVGEEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQVANAERFKVDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 QVGEEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQVANAERFKVDL
              130       140       150       160       170       180

              190       200       210      
pF1KE6 TPYPTISSINKRLLVLEAFQVSHPCRQPDTPTELRA
       ::::::::::::::::::::::::::::::::::::
CCDS98 TPYPTISSINKRLLVLEAFQVSHPCRQPDTPTELRA
              190       200       210      

>>CCDS9860.1 GSTZ1 gene_id:2954|Hs108|chr14               (161 aa)
 initn: 1056 init1: 1056 opt: 1056  Z-score: 1327.0  bits: 252.2 E(32554): 1.4e-67
Smith-Waterman score: 1056; 100.0% identity (100.0% similar) in 161 aa overlap (56-216:1-161)

          30        40        50        60        70        80     
pF1KE6 LKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAIIEYLEEMRPT
                                     ::::::::::::::::::::::::::::::
CCDS98                               MKQVPTLKIDGITIHQSLAIIEYLEEMRPT
                                             10        20        30

          90       100       110       120       130       140     
pF1KE6 PRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLKQVGEEMQLTWAQNAITCGFNALEQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 PRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLKQVGEEMQLTWAQNAITCGFNALEQI
               40        50        60        70        80        90

         150       160       170       180       190       200     
pF1KE6 LQSTAGIYCVGDEVTMADLCLVPQVANAERFKVDLTPYPTISSINKRLLVLEAFQVSHPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 LQSTAGIYCVGDEVTMADLCLVPQVANAERFKVDLTPYPTISSINKRLLVLEAFQVSHPC
              100       110       120       130       140       150

         210      
pF1KE6 RQPDTPTELRA
       :::::::::::
CCDS98 RQPDTPTELRA
              160 

>>CCDS9859.1 GSTZ1 gene_id:2954|Hs108|chr14               (174 aa)
 initn: 1141 init1: 674 opt: 683  Z-score: 861.1  bits: 166.1 E(32554): 1.2e-41
Smith-Waterman score: 1061; 80.6% identity (80.6% similar) in 216 aa overlap (1-216:1-174)

               10        20        30        40        50        60
pF1KE6 MQAGKPILYSYFRSSCSWRVRIALALKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 MQAGKPILYSYFRSSCSWRVRIALALKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 TLKIDGITIHQSLAIIEYLEEMRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLK
       ::::::::::::                                          ::::::
CCDS98 TLKIDGITIHQS------------------------------------------NLSVLK
               70                                                  

              130       140       150       160       170       180
pF1KE6 QVGEEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQVANAERFKVDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 QVGEEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQVANAERFKVDL
       80        90       100       110       120       130        

              190       200       210      
pF1KE6 TPYPTISSINKRLLVLEAFQVSHPCRQPDTPTELRA
       ::::::::::::::::::::::::::::::::::::
CCDS98 TPYPTISSINKRLLVLEAFQVSHPCRQPDTPTELRA
      140       150       160       170    




216 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 14:58:12 2016 done: Tue Nov  8 14:58:13 2016
 Total Scan time:  1.610 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]