Result of FASTA (omim) for
pFN21AE6624
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6624, 225 aa
1>>>pF1KE6624 225 - 225 aa - 225 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4886+/-0.000355; mu= 12.9228+/- 0.022
mean_var=67.7554+/-13.286, 0's: 0 Z-trim(114.6): 24 B-trim: 0 in 0/54
Lambda= 0.155813
statistics sampled from 24485 (24503) to 24485 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.287), width: 16
Scan time: 3.700
The best scores are: opt bits E(85289)
XP_006715823 (OMIM: 172480,614023) PREDICTED: phos ( 225) 1468 338.7 4.9e-93
XP_005271833 (OMIM: 172480,614023) PREDICTED: phos ( 225) 1468 338.7 4.9e-93
NP_004568 (OMIM: 172480,614023) phosphoserine phos ( 225) 1468 338.7 4.9e-93
XP_005271832 (OMIM: 172480,614023) PREDICTED: phos ( 225) 1468 338.7 4.9e-93
XP_005271831 (OMIM: 172480,614023) PREDICTED: phos ( 225) 1468 338.7 4.9e-93
XP_016867955 (OMIM: 172480,614023) PREDICTED: phos ( 225) 1468 338.7 4.9e-93
XP_005271830 (OMIM: 172480,614023) PREDICTED: phos ( 225) 1468 338.7 4.9e-93
XP_011513763 (OMIM: 172480,614023) PREDICTED: phos ( 225) 1468 338.7 4.9e-93
XP_016867956 (OMIM: 172480,614023) PREDICTED: phos ( 225) 1468 338.7 4.9e-93
XP_016867958 (OMIM: 172480,614023) PREDICTED: phos ( 180) 873 204.9 7.4e-53
XP_016867957 (OMIM: 172480,614023) PREDICTED: phos ( 180) 873 204.9 7.4e-53
XP_006715824 (OMIM: 172480,614023) PREDICTED: phos ( 180) 873 204.9 7.4e-53
>>XP_006715823 (OMIM: 172480,614023) PREDICTED: phosphos (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_006 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>XP_005271833 (OMIM: 172480,614023) PREDICTED: phosphos (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>NP_004568 (OMIM: 172480,614023) phosphoserine phosphat (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
NP_004 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>XP_005271832 (OMIM: 172480,614023) PREDICTED: phosphos (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>XP_005271831 (OMIM: 172480,614023) PREDICTED: phosphos (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>XP_016867955 (OMIM: 172480,614023) PREDICTED: phosphos (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>XP_005271830 (OMIM: 172480,614023) PREDICTED: phosphos (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>XP_011513763 (OMIM: 172480,614023) PREDICTED: phosphos (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>XP_016867956 (OMIM: 172480,614023) PREDICTED: phosphos (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 1791.3 bits: 338.7 E(85289): 4.9e-93
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
130 140 150 160 170 180
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
190 200 210 220
>>XP_016867958 (OMIM: 172480,614023) PREDICTED: phosphos (180 aa)
initn: 1161 init1: 873 opt: 873 Z-score: 1070.0 bits: 204.9 E(85289): 7.4e-53
Smith-Waterman score: 1075; 80.0% identity (80.0% similar) in 225 aa overlap (1-225:1-180)
10 20 30 40 50 60
pF1KE6 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEM-------------
10 20 30 40
70 80 90 100 110 120
pF1KE6 ALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA
::::::::::::::::::::::::::::
XP_016 --------------------------------ELVSRLQERNVQVFLISGGFRSIVEHVA
50 60 70
130 140 150 160 170 180
pF1KE6 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDG
80 90 100 110 120 130
190 200 210 220
pF1KE6 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE
140 150 160 170 180
225 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:53:23 2016 done: Tue Nov 8 14:53:24 2016
Total Scan time: 3.700 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]